BLASTX nr result

ID: Acanthopanax24_contig00016319 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00016319
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017233942.1| PREDICTED: GATA transcription factor 15-like...    56   3e-07

>ref|XP_017233942.1| PREDICTED: GATA transcription factor 15-like [Daucus carota subsp.
           sativus]
 gb|KZN04940.1| hypothetical protein DCAR_005777 [Daucus carota subsp. sativus]
          Length = 131

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 44/88 (50%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
 Frame = -3

Query: 433 CGIKYNKKRRQLLGLDXXXXXXXXXXXXXXXXXNEMGKSLK-MRLVALGREMGLKIS--X 263
           CGIKYNKKRRQLLGLD                 NE+ +S+K MRL+ALGREMGLKIS   
Sbjct: 46  CGIKYNKKRRQLLGLD--RSRKHGMKKKQKKSGNEVERSVKVMRLIALGREMGLKISATA 103

Query: 262 XXXXXXXXXXXXXXLSCGS--SMLD*MP 185
                         LSCGS  S+LD MP
Sbjct: 104 KFGEEEEAAILLMALSCGSLASVLDEMP 131


Top