BLASTX nr result
ID: Acanthopanax24_contig00016001
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00016001
(459 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019079284.1| PREDICTED: RNA polymerase II subunit 5-media... 66 9e-10
ref|XP_010656984.1| PREDICTED: RNA polymerase II subunit 5-media... 66 9e-10
emb|CBI21871.3| unnamed protein product, partial [Vitis vinifera] 66 9e-10
ref|XP_019159040.1| PREDICTED: uncharacterized protein LOC109155... 61 5e-08
ref|XP_019159039.1| PREDICTED: RNA polymerase II subunit 5-media... 61 5e-08
ref|XP_019159038.1| PREDICTED: RNA polymerase II subunit 5-media... 61 5e-08
ref|XP_023766235.1| RNA polymerase II subunit 5-mediating protei... 58 7e-07
ref|XP_023766234.1| RNA polymerase II subunit 5-mediating protei... 58 7e-07
gb|PLY83765.1| hypothetical protein LSAT_4X29780 [Lactuca sativa] 58 7e-07
ref|XP_007132672.1| hypothetical protein PHAVU_011G114900g [Phas... 57 9e-07
ref|XP_019449557.1| PREDICTED: RNA polymerase II subunit 5-media... 57 1e-06
ref|XP_016580803.1| PREDICTED: RNA polymerase II subunit 5-media... 57 1e-06
gb|PHT76669.1| hypothetical protein T459_20191 [Capsicum annuum] 57 1e-06
gb|PHU12403.1| hypothetical protein BC332_19333 [Capsicum chinense] 57 1e-06
gb|PHT43494.1| hypothetical protein CQW23_17519 [Capsicum baccatum] 57 1e-06
ref|XP_014493020.1| RNA polymerase II subunit 5-mediating protei... 56 3e-06
ref|XP_017432563.1| PREDICTED: RNA polymerase II subunit 5-media... 56 3e-06
gb|KHN28114.1| RNA polymerase II subunit 5-mediating protein lik... 55 5e-06
ref|XP_003540925.1| PREDICTED: RNA polymerase II subunit 5-media... 55 5e-06
ref|XP_022864962.1| RNA polymerase II subunit 5-mediating protei... 55 6e-06
>ref|XP_019079284.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Vitis vinifera]
Length = 381
Score = 66.2 bits (160), Expect = 9e-10
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 7/50 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAST-------SKPVSRFKMQRR 132
++DS KAFTGSIVEHTRN++ NPREQAA+S+ +KPVSRFKMQRR
Sbjct: 332 ATDSLKAFTGSIVEHTRNIQMNPREQAASSSQSSGSQPTKPVSRFKMQRR 381
>ref|XP_010656984.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Vitis vinifera]
Length = 385
Score = 66.2 bits (160), Expect = 9e-10
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 7/50 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAST-------SKPVSRFKMQRR 132
++DS KAFTGSIVEHTRN++ NPREQAA+S+ +KPVSRFKMQRR
Sbjct: 336 ATDSLKAFTGSIVEHTRNIQMNPREQAASSSQSSGSQPTKPVSRFKMQRR 385
>emb|CBI21871.3| unnamed protein product, partial [Vitis vinifera]
Length = 393
Score = 66.2 bits (160), Expect = 9e-10
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 7/50 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAST-------SKPVSRFKMQRR 132
++DS KAFTGSIVEHTRN++ NPREQAA+S+ +KPVSRFKMQRR
Sbjct: 344 ATDSLKAFTGSIVEHTRNIQMNPREQAASSSQSSGSQPTKPVSRFKMQRR 393
>ref|XP_019159040.1| PREDICTED: uncharacterized protein LOC109155828 isoform X3 [Ipomoea
nil]
Length = 359
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
S D SKAFTGSIVEH+ N ++ PREQ SKPVSRFKMQR+
Sbjct: 317 SFDVSKAFTGSIVEHSPNFDTQPREQVVGRASKPVSRFKMQRK 359
>ref|XP_019159039.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Ipomoea nil]
Length = 377
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
S D SKAFTGSIVEH+ N ++ PREQ SKPVSRFKMQR+
Sbjct: 335 SFDVSKAFTGSIVEHSPNFDTQPREQVVGRASKPVSRFKMQRK 377
>ref|XP_019159038.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Ipomoea nil]
Length = 379
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
S D SKAFTGSIVEH+ N ++ PREQ SKPVSRFKMQR+
Sbjct: 337 SFDVSKAFTGSIVEHSPNFDTQPREQVVGRASKPVSRFKMQRK 379
>ref|XP_023766235.1| RNA polymerase II subunit 5-mediating protein homolog isoform X2
[Lactuca sativa]
Length = 321
Score = 57.8 bits (138), Expect = 7e-07
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +1
Query: 1 TSSDSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
T +DSSKAFTGSIVEHT N E + Q A SKPVSRFKM+++
Sbjct: 278 TRNDSSKAFTGSIVEHTHNTEKSQTGQPPAPASKPVSRFKMRKK 321
>ref|XP_023766234.1| RNA polymerase II subunit 5-mediating protein homolog isoform X1
[Lactuca sativa]
Length = 323
Score = 57.8 bits (138), Expect = 7e-07
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +1
Query: 1 TSSDSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
T +DSSKAFTGSIVEHT N E + Q A SKPVSRFKM+++
Sbjct: 280 TRNDSSKAFTGSIVEHTHNTEKSQTGQPPAPASKPVSRFKMRKK 323
>gb|PLY83765.1| hypothetical protein LSAT_4X29780 [Lactuca sativa]
Length = 332
Score = 57.8 bits (138), Expect = 7e-07
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +1
Query: 1 TSSDSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
T +DSSKAFTGSIVEHT N E + Q A SKPVSRFKM+++
Sbjct: 289 TRNDSSKAFTGSIVEHTHNTEKSQTGQPPAPASKPVSRFKMRKK 332
>ref|XP_007132672.1| hypothetical protein PHAVU_011G114900g [Phaseolus vulgaris]
ref|XP_007132673.1| hypothetical protein PHAVU_011G114900g [Phaseolus vulgaris]
gb|ESW04666.1| hypothetical protein PHAVU_011G114900g [Phaseolus vulgaris]
gb|ESW04667.1| hypothetical protein PHAVU_011G114900g [Phaseolus vulgaris]
Length = 207
Score = 56.6 bits (135), Expect = 9e-07
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 7/49 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAS-------TSKPVSRFKMQR 129
S DS KAFTGSI+EH N+E + REQ++AS +SKPVSRFKMQR
Sbjct: 158 SFDSRKAFTGSIIEHAENIERSSREQSSASSQGSGSQSSKPVSRFKMQR 206
>ref|XP_019449557.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Lupinus angustifolius]
gb|OIW08361.1| hypothetical protein TanjilG_03037 [Lupinus angustifolius]
Length = 375
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 7/51 (13%)
Frame = +1
Query: 1 TSSDSSKAFTGSIVEHTRNMESNPREQAAAST-------SKPVSRFKMQRR 132
TS DS KAFTGSIVEH N+++ PREQ++ S+ KPVSRF+MQR+
Sbjct: 325 TSFDSRKAFTGSIVEHAENIKTTPREQSSTSSQVSDSQPKKPVSRFRMQRK 375
>ref|XP_016580803.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Capsicum annuum]
Length = 363
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 10 DSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
DSSKAFTGSI+EHT ++ N REQ+ + +SKPVSRFKMQR+
Sbjct: 325 DSSKAFTGSIIEHTSDV--NSREQSVSHSSKPVSRFKMQRK 363
>gb|PHT76669.1| hypothetical protein T459_20191 [Capsicum annuum]
Length = 368
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 10 DSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
DSSKAFTGSI+EHT ++ N REQ+ + +SKPVSRFKMQR+
Sbjct: 330 DSSKAFTGSIIEHTSDV--NSREQSVSHSSKPVSRFKMQRK 368
>gb|PHU12403.1| hypothetical protein BC332_19333 [Capsicum chinense]
Length = 377
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 10 DSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
DSSKAFTGSI+EHT ++ N REQ+ + +SKPVSRFKMQR+
Sbjct: 339 DSSKAFTGSIIEHTSDV--NSREQSVSRSSKPVSRFKMQRK 377
>gb|PHT43494.1| hypothetical protein CQW23_17519 [Capsicum baccatum]
Length = 377
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 10 DSSKAFTGSIVEHTRNMESNPREQAAASTSKPVSRFKMQRR 132
DSSKAFTGSI+EHT ++ N REQ+ + +SKPVSRFKMQR+
Sbjct: 339 DSSKAFTGSIIEHTSDV--NSREQSVSRSSKPVSRFKMQRK 377
>ref|XP_014493020.1| RNA polymerase II subunit 5-mediating protein homolog [Vigna
radiata var. radiata]
Length = 359
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 7/50 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAS-------TSKPVSRFKMQRR 132
S DS KAF GSI+EH N+E + REQ++AS +SKPVSRFKMQRR
Sbjct: 310 SFDSRKAFPGSIIEHAENIERSSREQSSASSQGSSSQSSKPVSRFKMQRR 359
>ref|XP_017432563.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Vigna angularis]
dbj|BAT90113.1| hypothetical protein VIGAN_06129100 [Vigna angularis var.
angularis]
Length = 374
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 7/50 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAS-------TSKPVSRFKMQRR 132
S DS KAF GSI+EH N+E + REQ++AS +SKPVSRFKMQRR
Sbjct: 325 SFDSRKAFPGSIIEHAENIERSSREQSSASSQGSGSQSSKPVSRFKMQRR 374
>gb|KHN28114.1| RNA polymerase II subunit 5-mediating protein like [Glycine soja]
Length = 374
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 7/50 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAS-------TSKPVSRFKMQRR 132
S DS KAFTGSI+EH N++ R+Q++AS +SKPVSRFKMQRR
Sbjct: 325 SFDSRKAFTGSIIEHAENIKPTTRQQSSASSQDSGSQSSKPVSRFKMQRR 374
>ref|XP_003540925.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Glycine max]
ref|XP_006592441.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Glycine max]
gb|KRH25619.1| hypothetical protein GLYMA_12G116000 [Glycine max]
gb|KRH25620.1| hypothetical protein GLYMA_12G116000 [Glycine max]
gb|KRH25621.1| hypothetical protein GLYMA_12G116000 [Glycine max]
Length = 374
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 7/50 (14%)
Frame = +1
Query: 4 SSDSSKAFTGSIVEHTRNMESNPREQAAAS-------TSKPVSRFKMQRR 132
S DS KAFTGSI+EH N++ R+Q++AS +SKPVSRFKMQRR
Sbjct: 325 SFDSRKAFTGSIIEHAENIKPTTRQQSSASSQDSGSQSSKPVSRFKMQRR 374
>ref|XP_022864962.1| RNA polymerase II subunit 5-mediating protein homolog isoform X1
[Olea europaea var. sylvestris]
ref|XP_022864963.1| RNA polymerase II subunit 5-mediating protein homolog isoform X1
[Olea europaea var. sylvestris]
Length = 332
Score = 55.1 bits (131), Expect = 6e-06
Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 7 SDSSKAFTGSIVEHTRNMESNPRE-QAAASTSKPVSRFKMQRR 132
SDSS AFTGSIVEH ++ N RE Q A +SKPVSRFKMQR+
Sbjct: 290 SDSSNAFTGSIVEHAPDIGKNSREQQTGARSSKPVSRFKMQRK 332