BLASTX nr result

ID: Acanthopanax24_contig00015778 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00015778
         (685 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM85804.1| hypothetical protein DCAR_026774 [Daucus carota s...    90   8e-20
gb|KZN06453.1| hypothetical protein DCAR_007290 [Daucus carota s...    72   4e-13
gb|KZM82648.1| hypothetical protein DCAR_030217 [Daucus carota s...    67   5e-11

>gb|KZM85804.1| hypothetical protein DCAR_026774 [Daucus carota subsp. sativus]
          Length = 79

 Score = 89.7 bits (221), Expect = 8e-20
 Identities = 42/72 (58%), Positives = 49/72 (68%)
 Frame = +3

Query: 249 VRVAFLLFILVAEMAAMGRAMKVKEMGFYSSIQNELXXXXXXXXXXXXCHNRVKLLHEGE 428
           +R A L+F + A  A+ G +MKVK MGFYS+I NEL            CHNRVKL+HEGE
Sbjct: 8   LRAALLIFTIFAAAASTGASMKVKAMGFYSAIPNELPRGPVPPSDPSPCHNRVKLMHEGE 67

Query: 429 DTYGHGHFVICP 464
           DTYG GHFVICP
Sbjct: 68  DTYGSGHFVICP 79


>gb|KZN06453.1| hypothetical protein DCAR_007290 [Daucus carota subsp. sativus]
          Length = 85

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +3

Query: 234 MIKNIVRVAFLLFILVAEMAAMGRAMKVKEMGFYSSIQNELXXXXXXXXXXXXCHNRVKL 413
           ++++I  V  +  IL+  MA  G +MKVK M F+SSIQ+EL            CHNRVKL
Sbjct: 8   VLRSIRAVLIIGMILLGGMATKGDSMKVKSMEFFSSIQSELPRGPVPPSDPSPCHNRVKL 67

Query: 414 LHEGED-TYGHGHFVICP 464
            HEG   +YGH HF++CP
Sbjct: 68  THEGSQYSYGHAHFIMCP 85


>gb|KZM82648.1| hypothetical protein DCAR_030217 [Daucus carota subsp. sativus]
          Length = 86

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = +3

Query: 234 MIKNIVRVAFLLFILVAEMAAMGRAMKVKEMGFYSSIQNELXXXXXXXXXXXXCHNRVKL 413
           +++ I     +  I++  MA  G +MKVK M F+ SIQ+EL            CHNRVKL
Sbjct: 9   LLRKIRAALVICMIVLGVMAPEGDSMKVKSMEFFGSIQSELPRGPVPPSDPSPCHNRVKL 68

Query: 414 LHEGE-DTYGHGHFVICP 464
           +HEG  ++YG  HF++CP
Sbjct: 69  MHEGSMESYGQAHFIMCP 86


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