BLASTX nr result

ID: Acanthopanax24_contig00015051 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00015051
         (501 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG11495.1| putative photosystem II PsbH, phosphoprotein [Hel...    58   7e-07
gb|OTG35047.1| putative photosystem II PsbH, phosphoprotein [Hel...    58   9e-07
gb|OTG07136.1| putative photosystem II PsbH, phosphoprotein [Hel...    58   9e-07
ref|XP_019257731.1| PREDICTED: uncharacterized protein LOC109235...    57   2e-06
ref|XP_016443822.1| PREDICTED: cytochrome b6 [Nicotiana tabacum]       57   2e-06
gb|OTG29929.1| putative cytochrome b6/f complex, subunit IV [Hel...    56   4e-06

>gb|OTG11495.1| putative photosystem II PsbH, phosphoprotein [Helianthus annuus]
          Length = 250

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 29/41 (70%), Positives = 30/41 (73%)
 Frame = +3

Query: 378 YPFKLVFGCFA*AVRDESLIYGSRRGSPTYLNKVYDWFEER 500
           +   LVF     AVRDESLIY SRRG  TYLNKVYDWFEER
Sbjct: 60  FGLNLVFLLNHRAVRDESLIYSSRRGDRTYLNKVYDWFEER 100


>gb|OTG35047.1| putative photosystem II PsbH, phosphoprotein [Helianthus annuus]
          Length = 304

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/41 (70%), Positives = 30/41 (73%)
 Frame = +3

Query: 378 YPFKLVFGCFA*AVRDESLIYGSRRGSPTYLNKVYDWFEER 500
           +   LVF     AVRDESLIY SRRG  TYLNKVYDWFEER
Sbjct: 60  FGLNLVFLLNHRAVRDESLIYSSRRGDHTYLNKVYDWFEER 100


>gb|OTG07136.1| putative photosystem II PsbH, phosphoprotein [Helianthus annuus]
          Length = 304

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/41 (70%), Positives = 30/41 (73%)
 Frame = +3

Query: 378 YPFKLVFGCFA*AVRDESLIYGSRRGSPTYLNKVYDWFEER 500
           +   LVF     AVRDESLIY SRRG  TYLNKVYDWFEER
Sbjct: 60  FGLNLVFLLNHRAVRDESLIYSSRRGDRTYLNKVYDWFEER 100


>ref|XP_019257731.1| PREDICTED: uncharacterized protein LOC109235942 [Nicotiana
           attenuata]
          Length = 479

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +3

Query: 414 AVRDESLIYGSRRGSPTYLNKVYDWFEER 500
           AVRDESLIYGS+RGS  YLNKVYDWFEER
Sbjct: 85  AVRDESLIYGSQRGSYAYLNKVYDWFEER 113


>ref|XP_016443822.1| PREDICTED: cytochrome b6 [Nicotiana tabacum]
          Length = 296

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 417 VRDESLIYGSRRGSPTYLNKVYDWFEER 500
           VRDESLIYGS+RGS  YLNKVYDWFEER
Sbjct: 65  VRDESLIYGSQRGSSAYLNKVYDWFEER 92


>gb|OTG29929.1| putative cytochrome b6/f complex, subunit IV [Helianthus annuus]
          Length = 449

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +3

Query: 414 AVRDESLIYGSRRGSPTYLNKVYDWFEER 500
           +VRDESLIY SRRG  TYLNKVYDWFEER
Sbjct: 31  SVRDESLIYSSRRGDRTYLNKVYDWFEER 59


Top