BLASTX nr result
ID: Acanthopanax24_contig00014908
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00014908
(745 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZN07009.1| hypothetical protein DCAR_007846 [Daucus carota s... 147 5e-38
ref|XP_017236120.1| PREDICTED: 30-kDa cleavage and polyadenylati... 147 5e-37
ref|XP_017229957.1| PREDICTED: 30-kDa cleavage and polyadenylati... 139 4e-34
gb|POO00962.1| Zinc finger, CCCH-type domain containing protein ... 136 5e-33
gb|PON54760.1| Zinc finger, CCCH-type domain containing protein ... 134 3e-32
ref|XP_015865601.1| PREDICTED: 30-kDa cleavage and polyadenylati... 132 2e-31
ref|XP_015882698.1| PREDICTED: 30-kDa cleavage and polyadenylati... 132 2e-31
ref|XP_024018926.1| 30-kDa cleavage and polyadenylation specific... 130 7e-31
ref|XP_010092677.1| 30-kDa cleavage and polyadenylation specific... 130 8e-31
ref|XP_016470576.1| PREDICTED: 30-kDa cleavage and polyadenylati... 126 4e-30
gb|PPR91347.1| hypothetical protein GOBAR_AA29341 [Gossypium bar... 126 1e-29
ref|XP_019255668.1| PREDICTED: 30-kDa cleavage and polyadenylati... 126 2e-29
ref|XP_009628296.1| PREDICTED: 30-kDa cleavage and polyadenylati... 126 2e-29
ref|XP_017637668.1| PREDICTED: 30-kDa cleavage and polyadenylati... 126 2e-29
ref|XP_023924514.1| 30-kDa cleavage and polyadenylation specific... 126 2e-29
ref|XP_022762694.1| 30-kDa cleavage and polyadenylation specific... 126 2e-29
ref|XP_022762693.1| 30-kDa cleavage and polyadenylation specific... 126 2e-29
ref|XP_021286688.1| 30-kDa cleavage and polyadenylation specific... 125 4e-29
gb|PPD84722.1| hypothetical protein GOBAR_DD18341 [Gossypium bar... 125 5e-29
emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera] 120 5e-29
>gb|KZN07009.1| hypothetical protein DCAR_007846 [Daucus carota subsp. sativus]
Length = 460
Score = 147 bits (372), Expect = 5e-38
Identities = 74/120 (61%), Positives = 86/120 (71%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNRVKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDD 566
GRP G N+ KRDQKA +NDRSDRYSAG DQGKG+E+ N+GGG DD
Sbjct: 340 GRPSGVHPMYPPAQLQPSLTTNKGKRDQKATVNDRSDRYSAGCDQGKGVELLNSGGGQDD 399
Query: 565 EARHQQRTNPQQEDQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSDQQ 386
E ++Q R NPQQED AGNS+ +D+S SEDEAPRRSRHGEG+KKRRS+ERD TT S Q
Sbjct: 400 EVQYQHRMNPQQEDHNGAGNSYKHDDSASEDEAPRRSRHGEGRKKRRSTERDETTASGNQ 459
>ref|XP_017236120.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Daucus carota subsp. sativus]
Length = 698
Score = 147 bits (372), Expect = 5e-37
Identities = 74/120 (61%), Positives = 86/120 (71%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNRVKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDD 566
GRP G N+ KRDQKA +NDRSDRYSAG DQGKG+E+ N+GGG DD
Sbjct: 578 GRPSGVHPMYPPAQLQPSLTTNKGKRDQKATVNDRSDRYSAGCDQGKGVELLNSGGGQDD 637
Query: 565 EARHQQRTNPQQEDQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSDQQ 386
E ++Q R NPQQED AGNS+ +D+S SEDEAPRRSRHGEG+KKRRS+ERD TT S Q
Sbjct: 638 EVQYQHRMNPQQEDHNGAGNSYKHDDSASEDEAPRRSRHGEGRKKRRSTERDETTASGNQ 697
>ref|XP_017229957.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Daucus carota subsp. sativus]
gb|KZN11206.1| hypothetical protein DCAR_003862 [Daucus carota subsp. sativus]
Length = 689
Score = 139 bits (351), Expect = 4e-34
Identities = 69/98 (70%), Positives = 80/98 (81%)
Frame = -1
Query: 679 RVKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSF 500
R KRDQKA N RSDRYSAGSDQGKG+++ GG D ++HQ+R NP+QEDQ GNSF
Sbjct: 593 RGKRDQKATSNYRSDRYSAGSDQGKGVDVAGLGG--QDISKHQRRMNPEQEDQIGDGNSF 650
Query: 499 GNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSDQQ 386
N+ES+SEDEAPRRSRHGEG+KKRRSSERDAT GS+ Q
Sbjct: 651 KNNESDSEDEAPRRSRHGEGRKKRRSSERDATAGSEDQ 688
>gb|POO00962.1| Zinc finger, CCCH-type domain containing protein [Trema orientalis]
Length = 708
Score = 136 bits (343), Expect = 5e-33
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 673 KRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSFGN 494
+RDQ+ P NDR++RY AGSDQ +G EM+ GG DDEA +QQ Q DQ+ AGNSF N
Sbjct: 614 RRDQRGPANDRNERYIAGSDQVRGQEMSGPAGGQDDEAHYQQGAKAHQSDQYGAGNSFRN 673
Query: 493 DESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
D+SESEDEAPRRSRHGEGKKKRR SE DATTGSD
Sbjct: 674 DDSESEDEAPRRSRHGEGKKKRRGSEGDATTGSD 707
>gb|PON54760.1| Zinc finger, CCCH-type domain containing protein [Parasponia
andersonii]
Length = 707
Score = 134 bits (337), Expect = 3e-32
Identities = 64/94 (68%), Positives = 73/94 (77%)
Frame = -1
Query: 673 KRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSFGN 494
+RDQ+ P NDR++RY AGSDQ +G E + GG DDEA +QQ Q DQ+ AGNSF N
Sbjct: 613 RRDQRGPANDRNERYIAGSDQVRGQEASGPAGGQDDEAHYQQGAKAHQSDQYGAGNSFRN 672
Query: 493 DESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
D+SESEDEAPRRSRHGEGKKKRR SE DATTGSD
Sbjct: 673 DDSESEDEAPRRSRHGEGKKKRRGSEGDATTGSD 706
>ref|XP_015865601.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Ziziphus jujuba]
Length = 696
Score = 132 bits (332), Expect = 2e-31
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = -1
Query: 673 KRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSFGN 494
KRDQ+ P NDR++R+S GSDQ KG E GG DDEA +QQ P QEDQ+ AGNSF N
Sbjct: 604 KRDQRGPANDRNERFSVGSDQLKGQE--GQAGGPDDEAHYQQGLKPHQEDQYGAGNSFRN 661
Query: 493 DESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DESESEDEAPRRSRHGEGKKKRR SE D TGSD
Sbjct: 662 DESESEDEAPRRSRHGEGKKKRRGSEGDGATGSD 695
>ref|XP_015882698.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Ziziphus jujuba]
Length = 702
Score = 132 bits (332), Expect = 2e-31
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = -1
Query: 673 KRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSFGN 494
KRDQ+ P NDR++R+S GSDQ KG E GG DDEA +QQ P QEDQ+ AGNSF N
Sbjct: 610 KRDQRGPANDRNERFSVGSDQLKGQE--GQAGGPDDEAHYQQGLKPHQEDQYGAGNSFRN 667
Query: 493 DESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DESESEDEAPRRSRHGEGKKKRR SE D TGSD
Sbjct: 668 DESESEDEAPRRSRHGEGKKKRRGSEGDGATGSD 701
>ref|XP_024018926.1| 30-kDa cleavage and polyadenylation specificity factor 30 isoform
X2 [Morus notabilis]
Length = 681
Score = 130 bits (327), Expect = 7e-31
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = -1
Query: 673 KRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSFGN 494
+RDQ+ NDR++RY AGSDQ +G EM+ GG +D+A +Q +QEDQ+ AGNSF N
Sbjct: 587 RRDQRGLANDRNERYGAGSDQVRGQEMSGPAGGPEDDAHYQLGAKARQEDQYGAGNSFRN 646
Query: 493 DESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DESESEDEAPRRSRHG+GKKKRRSSE DA TGSD
Sbjct: 647 DESESEDEAPRRSRHGDGKKKRRSSEEDAATGSD 680
>ref|XP_010092677.1| 30-kDa cleavage and polyadenylation specificity factor 30 isoform
X1 [Morus notabilis]
gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
notabilis]
Length = 710
Score = 130 bits (327), Expect = 8e-31
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = -1
Query: 673 KRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSFGN 494
+RDQ+ NDR++RY AGSDQ +G EM+ GG +D+A +Q +QEDQ+ AGNSF N
Sbjct: 616 RRDQRGLANDRNERYGAGSDQVRGQEMSGPAGGPEDDAHYQLGAKARQEDQYGAGNSFRN 675
Query: 493 DESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DESESEDEAPRRSRHG+GKKKRRSSE DA TGSD
Sbjct: 676 DESESEDEAPRRSRHGDGKKKRRSSEEDAATGSD 709
>ref|XP_016470576.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Nicotiana tabacum]
Length = 467
Score = 126 bits (317), Expect = 4e-30
Identities = 61/97 (62%), Positives = 77/97 (79%)
Frame = -1
Query: 679 RVKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSF 500
R KR+Q+AP++DR+DR+S+GSDQGKG EM + GG D + QR P+Q+ QF AGNSF
Sbjct: 372 RPKREQRAPVHDRNDRFSSGSDQGKGQEMAGSVGG-PDGVNYPQRGKPEQDAQFGAGNSF 430
Query: 499 GNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSDQ 389
NDESESEDEAPRRSRHG+GKKKRR ++ DA T S++
Sbjct: 431 KNDESESEDEAPRRSRHGDGKKKRRDTDDDAATASEK 467
>gb|PPR91347.1| hypothetical protein GOBAR_AA29341 [Gossypium barbadense]
Length = 631
Score = 126 bits (317), Expect = 1e-29
Identities = 70/120 (58%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNR-VKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLD 569
GRP+G R +KRDQ+ P NDRS SAGS+QG+G EM GGGLD
Sbjct: 514 GRPVGMPPMFPLPPAPASQNSGRAIKRDQRTPTNDRS---SAGSEQGRGQEMGGPGGGLD 570
Query: 568 DEARHQQR-TNPQQEDQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DE ++QQ EDQFAAGNSF ND+SESEDEAPRRSRHGEGKKKRR E D T SD
Sbjct: 571 DETQYQQEGQKAHHEDQFAAGNSFRNDDSESEDEAPRRSRHGEGKKKRRGLEGDVATASD 630
>ref|XP_019255668.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Nicotiana attenuata]
gb|OIS96848.1| 30-kda cleavage and polyadenylation specificity factor 30
[Nicotiana attenuata]
Length = 691
Score = 126 bits (317), Expect = 2e-29
Identities = 61/97 (62%), Positives = 77/97 (79%)
Frame = -1
Query: 679 RVKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSF 500
R KR+Q+AP++DR+DR+S+GSDQGKG EM + GG D + QR P+Q+ QF AGNSF
Sbjct: 596 RPKREQRAPVHDRNDRFSSGSDQGKGQEMAGSVGG-PDGVNYPQRGKPEQDAQFGAGNSF 654
Query: 499 GNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSDQ 389
NDESESEDEAPRRSRHG+GKKKRR ++ DA T S++
Sbjct: 655 KNDESESEDEAPRRSRHGDGKKKRRDTDDDAATASEK 691
>ref|XP_009628296.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Nicotiana tomentosiformis]
Length = 691
Score = 126 bits (317), Expect = 2e-29
Identities = 61/97 (62%), Positives = 77/97 (79%)
Frame = -1
Query: 679 RVKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQRTNPQQEDQFAAGNSF 500
R KR+Q+AP++DR+DR+S+GSDQGKG EM + GG D + QR P+Q+ QF AGNSF
Sbjct: 596 RPKREQRAPVHDRNDRFSSGSDQGKGQEMAGSVGG-PDGVNYPQRGKPEQDAQFGAGNSF 654
Query: 499 GNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSDQ 389
NDESESEDEAPRRSRHG+GKKKRR ++ DA T S++
Sbjct: 655 KNDESESEDEAPRRSRHGDGKKKRRDTDDDAATASEK 691
>ref|XP_017637668.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Gossypium arboreum]
Length = 699
Score = 126 bits (317), Expect = 2e-29
Identities = 70/120 (58%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNR-VKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLD 569
GRP+G R +KRDQ+ P NDRS SAGS+QG+G EM GGGLD
Sbjct: 582 GRPVGMPPMFPLPPAPASQNSGRAIKRDQRTPTNDRS---SAGSEQGRGQEMGGPGGGLD 638
Query: 568 DEARHQQR-TNPQQEDQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DE ++QQ EDQFAAGNSF ND+SESEDEAPRRSRHGEGKKKRR E D T SD
Sbjct: 639 DETQYQQEGQKAHHEDQFAAGNSFRNDDSESEDEAPRRSRHGEGKKKRRGLEGDVATASD 698
>ref|XP_023924514.1| 30-kDa cleavage and polyadenylation specificity factor 30 [Quercus
suber]
gb|POF27418.1| 30-kda cleavage and polyadenylation specificity factor 30 [Quercus
suber]
Length = 727
Score = 126 bits (317), Expect = 2e-29
Identities = 71/119 (59%), Positives = 82/119 (68%), Gaps = 1/119 (0%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNRV-KRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLD 569
GRP+G NRV KRDQ+A NDR+DRYSAGSDQGKG EM + GGG D
Sbjct: 611 GRPVGMPQMFPPPPPPSNQNNNRVVKRDQRA--NDRNDRYSAGSDQGKGQEMPSPGGGPD 668
Query: 568 DEARHQQRTNPQQEDQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
D++++Q +DQ+ AGN+F NDESESEDEAPRRSRHGEGKKKRR SE D T SD
Sbjct: 669 DDSQYQHG-KVHHDDQYGAGNNFRNDESESEDEAPRRSRHGEGKKKRRGSEGDGITVSD 726
>ref|XP_022762694.1| 30-kDa cleavage and polyadenylation specificity factor 30 isoform
X2 [Durio zibethinus]
Length = 697
Score = 126 bits (316), Expect = 2e-29
Identities = 70/120 (58%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNR-VKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLD 569
GRP+G R +KRDQK P NDR YSA SDQG+G EM GGGLD
Sbjct: 580 GRPVGMPPMFPLPPAPSSQNSGRAIKRDQKTPTNDR---YSAVSDQGRGQEMAGPGGGLD 636
Query: 568 DEARHQQRTNPQQE-DQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DE ++QQ DQFAAGNSF ND+S+SEDEAPRRSRHGEGKKKRRS E + TGSD
Sbjct: 637 DETQYQQEGQKAHHGDQFAAGNSFRNDDSDSEDEAPRRSRHGEGKKKRRSLEGEVATGSD 696
>ref|XP_022762693.1| 30-kDa cleavage and polyadenylation specificity factor 30 isoform
X1 [Durio zibethinus]
Length = 735
Score = 126 bits (316), Expect = 2e-29
Identities = 70/120 (58%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNR-VKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLD 569
GRP+G R +KRDQK P NDR YSA SDQG+G EM GGGLD
Sbjct: 618 GRPVGMPPMFPLPPAPSSQNSGRAIKRDQKTPTNDR---YSAVSDQGRGQEMAGPGGGLD 674
Query: 568 DEARHQQRTNPQQE-DQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DE ++QQ DQFAAGNSF ND+S+SEDEAPRRSRHGEGKKKRRS E + TGSD
Sbjct: 675 DETQYQQEGQKAHHGDQFAAGNSFRNDDSDSEDEAPRRSRHGEGKKKRRSLEGEVATGSD 734
>ref|XP_021286688.1| 30-kDa cleavage and polyadenylation specificity factor 30 [Herrania
umbratica]
Length = 698
Score = 125 bits (314), Expect = 4e-29
Identities = 66/96 (68%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -1
Query: 676 VKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDDEARHQQR-TNPQQEDQFAAGNSF 500
VKRDQ+ P NDR YSAGS+QG+G EM GG LDDE ++QQ +EDQFAAGNSF
Sbjct: 605 VKRDQRTPTNDR---YSAGSEQGRGQEMAGPGGRLDDEIQYQQEGQKAHREDQFAAGNSF 661
Query: 499 GNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DESESEDEAPRRSRHGEGKKKRRS E D GSD
Sbjct: 662 RTDESESEDEAPRRSRHGEGKKKRRSLEGDDANGSD 697
>gb|PPD84722.1| hypothetical protein GOBAR_DD18341 [Gossypium barbadense]
Length = 642
Score = 125 bits (313), Expect = 5e-29
Identities = 69/120 (57%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNR-VKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLD 569
GRP+G R +KRDQ+ P NDRS SAGS+QG+G EM GGGL+
Sbjct: 525 GRPVGMPPMFPLPPAPASQNSGRAIKRDQRTPTNDRS---SAGSEQGRGQEMGGPGGGLE 581
Query: 568 DEARHQQR-TNPQQEDQFAAGNSFGNDESESEDEAPRRSRHGEGKKKRRSSERDATTGSD 392
DE ++QQ EDQFAAGNSF ND+SESEDEAPRRSRHGEGKKKRR E D T SD
Sbjct: 582 DETQYQQEGQKAHHEDQFAAGNSFRNDDSESEDEAPRRSRHGEGKKKRRGLEGDVATASD 641
>emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]
Length = 299
Score = 120 bits (301), Expect = 5e-29
Identities = 62/106 (58%), Positives = 71/106 (66%)
Frame = -1
Query: 745 GRPLGXXXXXXXXXXXXXXXXNRVKRDQKAPMNDRSDRYSAGSDQGKGLEMTNTGGGLDD 566
GRP+G NR KRDQ+ P+NDR+DRYS GSDQG+G +M G DD
Sbjct: 198 GRPVGMPPMFPPPPPPNSQNTNRTKRDQRTPVNDRNDRYSGGSDQGRGQDMA----GPDD 253
Query: 565 EARHQQRTNPQQEDQFAAGNSFGNDESESEDEAPRRSRHGEGKKKR 428
E ++ Q QQ+DQF GNSF NDESESEDEAPRRSRHGEGKKKR
Sbjct: 254 ETQYLQGLKSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 299