BLASTX nr result

ID: Acanthopanax24_contig00014583 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00014583
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN02597.1| hypothetical protein DCAR_011351 [Daucus carota s...    60   5e-09
gb|KZM97499.1| hypothetical protein DCAR_015139 [Daucus carota s...    52   6e-06

>gb|KZN02597.1| hypothetical protein DCAR_011351 [Daucus carota subsp. sativus]
          Length = 105

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
 Frame = +2

Query: 89  FFAILRRIRVTVKYFQNNNTNGGPHDKLPESFVPALETAVDPEP---VDVKFGDNS-VLD 256
           FF IL R+R TVKY +NN        K+ ES +PALE    P+    VDVK GDN+ VLD
Sbjct: 43  FFTILNRMRSTVKYLKNN--------KVGESIIPALEVPPPPDEEVVVDVKVGDNNCVLD 94

Query: 257 LNSIPD-GESN 286
           LNSIPD GES+
Sbjct: 95  LNSIPDEGESD 105


>gb|KZM97499.1| hypothetical protein DCAR_015139 [Daucus carota subsp. sativus]
          Length = 118

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +2

Query: 89  FFAILRRIRVTVKYFQNNNTNGGPHDKLPESFVPALETAVDPEP-VDVKFGD-NSVLDLN 262
           FF IL R+RVT KY +++ +    +D   +   PA E  V  E  V+VK GD N VLDLN
Sbjct: 51  FFTILNRMRVTAKYLKSSKSANANNDG--DVIFPATELPVLHEAKVEVKVGDANLVLDLN 108

Query: 263 SIPDGESNGE 292
           S+PDGE N +
Sbjct: 109 SLPDGEINSD 118


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