BLASTX nr result
ID: Acanthopanax24_contig00013638
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00013638
(586 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017249653.1| PREDICTED: putative exosome complex componen... 107 6e-47
ref|XP_023923244.1| putative exosome complex component rrp40 [Qu... 108 1e-46
ref|XP_021651473.1| putative exosome complex component rrp40 [He... 106 2e-46
ref|XP_012080072.1| putative exosome complex component rrp40 [Ja... 100 9e-46
ref|XP_018821286.1| PREDICTED: putative exosome complex componen... 102 9e-45
ref|XP_007209525.2| putative exosome complex component rrp40 [Pr... 102 3e-44
ref|XP_011071845.1| putative exosome complex component rrp40 [Se... 102 3e-44
ref|XP_023743525.1| putative exosome complex component rrp40 [La... 98 3e-44
emb|CDP12399.1| unnamed protein product [Coffea canephora] 94 4e-44
ref|XP_008239762.1| PREDICTED: putative exosome complex componen... 104 6e-44
gb|KZV56559.1| protein binding protein [Dorcoceras hygrometricum] 100 7e-44
ref|XP_017426657.1| PREDICTED: putative exosome complex componen... 102 7e-44
ref|XP_016666802.1| PREDICTED: putative exosome complex componen... 102 1e-43
ref|XP_017635429.1| PREDICTED: putative exosome complex componen... 102 1e-43
ref|XP_021826067.1| putative exosome complex component rrp40 [Pr... 102 1e-43
ref|XP_014492890.1| putative exosome complex component rrp40 [Vi... 102 2e-43
ref|XP_012831207.1| PREDICTED: putative exosome complex componen... 101 2e-43
ref|XP_022738928.1| putative exosome complex component rrp40 iso... 103 2e-43
ref|XP_004298940.1| PREDICTED: putative exosome complex componen... 102 3e-43
gb|OVA07587.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ... 102 3e-43
>ref|XP_017249653.1| PREDICTED: putative exosome complex component rrp40 isoform X1
[Daucus carota subsp. sativus]
gb|KZM93240.1| hypothetical protein DCAR_016485 [Daucus carota subsp. sativus]
Length = 241
Score = 107 bits (267), Expect(4) = 6e-47
Identities = 49/60 (81%), Positives = 56/60 (93%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCD+IT MKAG LRFSKPNKYWVESSQKRYVPS G++VLGIVVDT+A+NFL+DI+
Sbjct: 39 GGLRQDCDSITAMKAGMLRFSKPNKYWVESSQKRYVPSAGDAVLGIVVDTKAENFLIDIK 98
Score = 55.1 bits (131), Expect(4) = 6e-47
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = -2
Query: 513 MDAAKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
M A+P N+ SY+D+LVVPGDVV+DLS+M+NQTIKL
Sbjct: 1 MAIAEPTNNSPSYIDKLVVPGDVVLDLSSMSNQTIKL 37
Score = 50.4 bits (119), Expect(4) = 6e-47
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG ALA+LPVLAFEGGTRRNIPKFE
Sbjct: 98 KGPALAYLPVLAFEGGTRRNIPKFE 122
Score = 43.9 bits (102), Expect(4) = 6e-47
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 13/55 (23%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFMDNT-------------FFTANTFLSKWLLGS 13
+VGTL+YVR+V+AN+GMNP+++ MD + F +T LS+ LL S
Sbjct: 122 EVGTLIYVRVVKANIGMNPDLSCMDASGKAAEFGPLKDGYMFETSTGLSRMLLSS 176
>ref|XP_023923244.1| putative exosome complex component rrp40 [Quercus suber]
gb|POE97101.1| putative exosome complex component rrp40 [Quercus suber]
Length = 243
Score = 108 bits (270), Expect(4) = 1e-46
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI+VMKAGKLRFS PNKYWVESSQKRYVP G+SVLGIVVD++ADNFLVDI+
Sbjct: 38 GGLRQDCDAISVMKAGKLRFSNPNKYWVESSQKRYVPHAGDSVLGIVVDSKADNFLVDIK 97
Score = 55.5 bits (132), Expect(4) = 1e-46
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
KP +SPTS+VDQ VVPGDVV+DLS M NQT+KL
Sbjct: 4 KPTSSPTSFVDQSVVPGDVVLDLSNMTNQTLKL 36
Score = 48.9 bits (115), Expect(4) = 1e-46
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG LAFLPVLAFEGGTRRNIP+FE
Sbjct: 97 KGPGLAFLPVLAFEGGTRRNIPRFE 121
Score = 42.7 bits (99), Expect(4) = 1e-46
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
++GTLLYVR+V+AN GMNPE++ D F ++T LS+ LL S T
Sbjct: 121 EIGTLLYVRVVKANPGMNPELSCTDASGKAAEFGQLKDGYMFESSTGLSRMLLSSPT 177
>ref|XP_021651473.1| putative exosome complex component rrp40 [Hevea brasiliensis]
Length = 241
Score = 106 bits (265), Expect(4) = 2e-46
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QD DAI+VMKAGKLRFSKPNKYWVESSQKRYVP VG+SVLGIVVD++A+NFLVDI+
Sbjct: 38 GGLRQDSDAISVMKAGKLRFSKPNKYWVESSQKRYVPCVGDSVLGIVVDSKAENFLVDIK 97
Score = 57.4 bits (137), Expect(4) = 2e-46
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
KP++SP S++DQ+VVPGDVV+DLSTM NQTIKL
Sbjct: 4 KPSSSPMSFIDQIVVPGDVVLDLSTMTNQTIKL 36
Score = 51.6 bits (122), Expect(4) = 2e-46
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG ALAFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPALAFLPVLAFEGGTRRNIPKFE 121
Score = 39.7 bits (91), Expect(4) = 2e-46
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 13/55 (23%)
Frame = -2
Query: 132 GTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
GTLLYVR+V+AN GMNPE++ D F +T LS+ LL S T
Sbjct: 123 GTLLYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLRSPT 177
>ref|XP_012080072.1| putative exosome complex component rrp40 [Jatropha curcas]
gb|KDP31104.1| hypothetical protein JCGZ_11480 [Jatropha curcas]
Length = 241
Score = 100 bits (250), Expect(4) = 9e-46
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI+V K+GKLRFSKPNKYWVE SQKRYVP +SVLGIVVD++A+NFLVDI+
Sbjct: 38 GGLRQDCDAISVTKSGKLRFSKPNKYWVEGSQKRYVPCAEDSVLGIVVDSKAENFLVDIK 97
Score = 59.3 bits (142), Expect(4) = 9e-46
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = -2
Query: 504 AKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
AKP++SPTS VD+LVVPGDVV+DLSTM+NQTIKL
Sbjct: 3 AKPSSSPTSLVDKLVVPGDVVIDLSTMSNQTIKL 36
Score = 50.1 bits (118), Expect(4) = 9e-46
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG LAFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPTLAFLPVLAFEGGTRRNIPKFE 121
Score = 42.7 bits (99), Expect(4) = 9e-46
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
+VGTLLYVR+V+AN GMNPE++ D F +T LS+ LL S T
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLSSPT 177
>ref|XP_018821286.1| PREDICTED: putative exosome complex component rrp40 [Juglans regia]
Length = 243
Score = 102 bits (254), Expect(4) = 9e-45
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI V KAGKLR SKPNKYWVESSQKRY P G+SVLGIVVD++ADNFLVDI+
Sbjct: 38 GGLRQDCDAIAVTKAGKLRCSKPNKYWVESSQKRYEPHAGDSVLGIVVDSKADNFLVDIK 97
Score = 53.9 bits (128), Expect(4) = 9e-45
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = -2
Query: 498 PANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
P+ SP S+VDQLVVPGDVV+DL++M NQTIKL
Sbjct: 5 PSGSPASFVDQLVVPGDVVLDLNSMTNQTIKL 36
Score = 50.4 bits (119), Expect(4) = 9e-45
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG ALA+LPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPALAYLPVLAFEGGTRRNIPKFE 121
Score = 42.7 bits (99), Expect(4) = 9e-45
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
+VGTLLYVR+V+AN GMNPE++ D F ++T LS+ LL S T
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGQLKDGYMFESSTGLSRTLLSSPT 177
>ref|XP_007209525.2| putative exosome complex component rrp40 [Prunus persica]
gb|ONI08375.1| hypothetical protein PRUPE_5G174300 [Prunus persica]
Length = 243
Score = 102 bits (254), Expect(4) = 3e-44
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI MKAG L+FSKPNKYWVE+SQKRYVP G+SVLGIV D++ADNFLVDI+
Sbjct: 38 GGLRQDCDAIAAMKAGTLKFSKPNKYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIK 97
Score = 52.8 bits (125), Expect(4) = 3e-44
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -2
Query: 507 AAKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
A K SP S+VDQ VVPGDVV+DL++MANQTIKL
Sbjct: 2 AEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKL 36
Score = 49.3 bits (116), Expect(4) = 3e-44
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG +AFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPTIAFLPVLAFEGGTRRNIPKFE 121
Score = 43.5 bits (101), Expect(4) = 3e-44
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 13/55 (23%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFMDNT-------------FFTANTFLSKWLLGS 13
+VGTLLYVR+V+AN GMNPE++ +D + F +T LSK LL S
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSKMLLSS 175
>ref|XP_011071845.1| putative exosome complex component rrp40 [Sesamum indicum]
ref|XP_011071846.1| putative exosome complex component rrp40 [Sesamum indicum]
ref|XP_011071847.1| putative exosome complex component rrp40 [Sesamum indicum]
Length = 240
Score = 102 bits (255), Expect(4) = 3e-44
Identities = 49/60 (81%), Positives = 54/60 (90%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QD D I+VMKAGKLRFSKPNKYWVESS KRYVPS G++VLGIVVD +ADNFLVDI+
Sbjct: 38 GGLRQDGDVISVMKAGKLRFSKPNKYWVESSHKRYVPSAGDNVLGIVVDAKADNFLVDIK 97
Score = 51.6 bits (122), Expect(4) = 3e-44
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -2
Query: 504 AKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
+KP+ SP+S+VDQ V PGDVV+DLS M NQTIKL
Sbjct: 3 SKPSVSPSSFVDQQVFPGDVVLDLSKMTNQTIKL 36
Score = 49.7 bits (117), Expect(4) = 3e-44
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG LAFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPMLAFLPVLAFEGGTRRNIPKFE 121
Score = 43.9 bits (102), Expect(4) = 3e-44
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFMDNT-------------FFTANTFLSKWLLGSLT 7
++GTLLYVR+V+AN GMNPE++ MD + F ++T LS+ LL + T
Sbjct: 121 EIGTLLYVRVVKANTGMNPELSCMDASGKAAEYGPLKDGFMFESSTGLSRTLLSTPT 177
>ref|XP_023743525.1| putative exosome complex component rrp40 [Lactuca sativa]
gb|PLY66375.1| hypothetical protein LSAT_4X75321 [Lactuca sativa]
Length = 241
Score = 97.8 bits (242), Expect(4) = 3e-44
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QD D+I+VMKAG LRF+KPNKYWVESS KRYVPS G++VLG+VVDT+ +NFLVDI+
Sbjct: 39 GGLRQDGDSISVMKAGTLRFTKPNKYWVESSHKRYVPSAGDNVLGVVVDTKPENFLVDIK 98
Score = 55.8 bits (133), Expect(4) = 3e-44
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = -2
Query: 513 MDAAKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
M+A + SP+++VDQLVVPGDV++DLS+MANQTIKL
Sbjct: 1 MEAKPSSTSPSTFVDQLVVPGDVILDLSSMANQTIKL 37
Score = 51.6 bits (122), Expect(4) = 3e-44
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG ALAFLPVLAFEGGTRRNIPKFE
Sbjct: 98 KGPALAFLPVLAFEGGTRRNIPKFE 122
Score = 42.4 bits (98), Expect(4) = 3e-44
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 13/55 (23%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFM-------------DNTFFTANTFLSKWLLGS 13
+VGTLLYVR+V AN GMNPE++ M + F ++T LS+ LL S
Sbjct: 122 EVGTLLYVRVVNANTGMNPELSCMEANGKAAEYGVLKEGYMFESSTGLSRTLLSS 176
>emb|CDP12399.1| unnamed protein product [Coffea canephora]
Length = 240
Score = 94.4 bits (233), Expect(4) = 4e-44
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = -1
Query: 397 GLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GL QD DAI+ +KAG LRF+KPNKYWVESSQKRYVP G++VLGIVVD+++DNFLVDI+
Sbjct: 39 GLRQDGDAISAIKAGVLRFAKPNKYWVESSQKRYVPCAGDTVLGIVVDSRSDNFLVDIK 97
Score = 55.5 bits (132), Expect(4) = 4e-44
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = -2
Query: 504 AKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKLAA 397
+KP++SP +++DQ VVPGDVV+DLSTM NQTIKL +
Sbjct: 3 SKPSSSPPNFIDQQVVPGDVVLDLSTMTNQTIKLGS 38
Score = 50.1 bits (118), Expect(4) = 4e-44
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG LAFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPTLAFLPVLAFEGGTRRNIPKFE 121
Score = 47.4 bits (111), Expect(4) = 4e-44
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFMDNT-------------FFTANTFLSKWLLGSLT 7
+VGTLLYVR+V+ANVGMNPE++ MD + F ++T LS+ LL S T
Sbjct: 121 EVGTLLYVRVVKANVGMNPELSCMDASGKAAEFGRLKDGYMFESSTGLSRMLLSSPT 177
>ref|XP_008239762.1| PREDICTED: putative exosome complex component rrp40 [Prunus mume]
Length = 243
Score = 104 bits (259), Expect(4) = 6e-44
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAIT MKAG L+FSKPNKYWVE+SQKRYVP G+SVLGIV D++ADNFLVDI+
Sbjct: 38 GGLRQDCDAITAMKAGTLKFSKPNKYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIK 97
Score = 52.8 bits (125), Expect(4) = 6e-44
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -2
Query: 507 AAKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
A K SP S+VDQ VVPGDVV+DL++MANQTIKL
Sbjct: 2 AEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKL 36
Score = 48.9 bits (115), Expect(4) = 6e-44
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG +AFLPVLAFEGGTRRN+PKFE
Sbjct: 97 KGPTIAFLPVLAFEGGTRRNVPKFE 121
Score = 40.8 bits (94), Expect(4) = 6e-44
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFMD 64
+VGTLLYVR+V+AN GMNPE++ +D
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCID 145
>gb|KZV56559.1| protein binding protein [Dorcoceras hygrometricum]
Length = 626
Score = 100 bits (249), Expect(4) = 7e-44
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QD D I+VMKAG LRF+KPNKYW+ESS KRY+PSVG+ +LGIVVDT+ADNFLVDI+
Sbjct: 395 GGLRQDGDVISVMKAGILRFTKPNKYWIESSNKRYIPSVGDDILGIVVDTKADNFLVDIK 454
Score = 52.0 bits (123), Expect(4) = 7e-44
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -2
Query: 504 AKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
+KP++SP S+VDQ V PGDVV+DLS + NQTIKL
Sbjct: 360 SKPSSSPASFVDQQVFPGDVVLDLSNLTNQTIKL 393
Score = 47.4 bits (111), Expect(4) = 7e-44
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 13/60 (21%)
Frame = -2
Query: 147 FMLQVGTLLYVRIVEANVGMNPEIAFMDNT-------------FFTANTFLSKWLLGSLT 7
+ LQ+GTLLYVR+V+AN GMNPE++ MD + F ++T LS+ LL S T
Sbjct: 504 YCLQMGTLLYVRVVKANTGMNPELSCMDASGKAAEYGPLKDGFMFESSTGLSRMLLKSPT 563
Score = 46.6 bits (109), Expect(4) = 7e-44
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG +A+LPVLAFEGGTRRNIPKF+
Sbjct: 454 KGPTVAYLPVLAFEGGTRRNIPKFD 478
>ref|XP_017426657.1| PREDICTED: putative exosome complex component rrp40 [Vigna
angularis]
gb|KOM45906.1| hypothetical protein LR48_Vigan06g121200 [Vigna angularis]
dbj|BAT99075.1| hypothetical protein VIGAN_10045400 [Vigna angularis var.
angularis]
Length = 240
Score = 102 bits (253), Expect(4) = 7e-44
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL Q+CDAI+VMKAGKLRFSKPNKYWVE+SQKRYVP +SVLGIV D+++DNFLVDI+
Sbjct: 38 GGLRQECDAISVMKAGKLRFSKPNKYWVENSQKRYVPHAEDSVLGIVADSRSDNFLVDIK 97
Score = 51.2 bits (121), Expect(4) = 7e-44
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
KP++S ++VDQLV PGDVV+DLS+M NQTIKL
Sbjct: 4 KPSSSSANFVDQLVCPGDVVLDLSSMTNQTIKL 36
Score = 50.8 bits (120), Expect(4) = 7e-44
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG A+AFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPAIAFLPVLAFEGGTRRNIPKFE 121
Score = 42.4 bits (98), Expect(4) = 7e-44
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEI-------------AFMDNTFFTANTFLSKWLLGSLT 7
++GTLLYVR+V+AN GMNPE+ A D F T LS+ LL S T
Sbjct: 121 EIGTLLYVRVVKANPGMNPELSCTDATGKAAEFGALKDGYMFECTTGLSRRLLSSPT 177
>ref|XP_016666802.1| PREDICTED: putative exosome complex component rrp40 isoform X1
[Gossypium hirsutum]
Length = 263
Score = 102 bits (255), Expect(4) = 1e-43
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI+ MKAG LRFSKPNKYW+ESSQKRYVP V +++LGIVVD++ADNFL+DI+
Sbjct: 38 GGLRQDCDAISAMKAGTLRFSKPNKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIK 97
Score = 50.4 bits (119), Expect(4) = 1e-43
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFEAL 144
KG A+ FLPVLAFEGGTRRNIPKFE L
Sbjct: 97 KGPAMGFLPVLAFEGGTRRNIPKFEIL 123
Score = 48.5 bits (114), Expect(4) = 1e-43
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
K ++SP S+VD VVPGDVV+DLS+M +QTIKL
Sbjct: 4 KQSSSPASFVDSTVVPGDVVLDLSSMTSQTIKL 36
Score = 43.9 bits (102), Expect(4) = 1e-43
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 13/60 (21%)
Frame = -2
Query: 147 FMLQVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
+ L+VGTLLY+R+V+AN GMNPE++ D F +T LS+ LL S T
Sbjct: 141 YQLEVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPT 200
>ref|XP_017635429.1| PREDICTED: putative exosome complex component rrp40 isoform X1
[Gossypium arboreum]
gb|KHG27308.1| Putative exosome complex component rrp40 [Gossypium arboreum]
Length = 263
Score = 102 bits (255), Expect(4) = 1e-43
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI+ MKAG LRFSKPNKYW+ESSQKRYVP V +++LGIVVD++ADNFL+DI+
Sbjct: 38 GGLRQDCDAISAMKAGTLRFSKPNKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIK 97
Score = 50.4 bits (119), Expect(4) = 1e-43
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFEAL 144
KG A+ FLPVLAFEGGTRRNIPKFE L
Sbjct: 97 KGPAMGFLPVLAFEGGTRRNIPKFEIL 123
Score = 48.5 bits (114), Expect(4) = 1e-43
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
K ++SP S+VD VVPGDVV+DLS+M +QTIKL
Sbjct: 4 KQSSSPASFVDSTVVPGDVVLDLSSMTSQTIKL 36
Score = 43.9 bits (102), Expect(4) = 1e-43
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 13/60 (21%)
Frame = -2
Query: 147 FMLQVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
+ L+VGTLLY+R+V+AN GMNPE++ D F +T LS+ LL S T
Sbjct: 141 YQLEVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPT 200
>ref|XP_021826067.1| putative exosome complex component rrp40 [Prunus avium]
Length = 243
Score = 102 bits (254), Expect(4) = 1e-43
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI MKAG L+FSKPNKYWVE+SQKRYVP G+SVLGIV D++ADNFLVDI+
Sbjct: 38 GGLRQDCDAIAAMKAGTLKFSKPNKYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIK 97
Score = 51.6 bits (122), Expect(4) = 1e-43
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -2
Query: 507 AAKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
A K + SP S+VDQ VVPGDVV+DL++M NQTIKL
Sbjct: 2 AEKASGSPASFVDQSVVPGDVVLDLTSMVNQTIKL 36
Score = 49.3 bits (116), Expect(4) = 1e-43
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG +AFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPTIAFLPVLAFEGGTRRNIPKFE 121
Score = 42.4 bits (98), Expect(4) = 1e-43
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 13/55 (23%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFMDNT-------------FFTANTFLSKWLLGS 13
+VGTLLYVR+V+AN GMNPE++ +D + F +T LS+ LL S
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSRMLLSS 175
>ref|XP_014492890.1| putative exosome complex component rrp40 [Vigna radiata var.
radiata]
Length = 240
Score = 102 bits (254), Expect(4) = 2e-43
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI+VMKAG+LRFSKPNKYWVE+SQKRYVP +SVLGIV D+++DNFLVDI+
Sbjct: 38 GGLRQDCDAISVMKAGRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVADSRSDNFLVDIK 97
Score = 51.2 bits (121), Expect(4) = 2e-43
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
KP++S ++VDQLV PGDVV+DLS+M NQTIKL
Sbjct: 4 KPSSSSANFVDQLVCPGDVVLDLSSMTNQTIKL 36
Score = 50.8 bits (120), Expect(4) = 2e-43
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG A+AFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPAIAFLPVLAFEGGTRRNIPKFE 121
Score = 40.8 bits (94), Expect(4) = 2e-43
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEI-------------AFMDNTFFTANTFLSKWLLGSLT 7
++GTLLY R+V+AN GMNPE+ A D F T LS+ LL S T
Sbjct: 121 EIGTLLYARVVKANPGMNPELSCTDATGKAAEFGALKDGYMFECTTGLSRRLLSSPT 177
>ref|XP_012831207.1| PREDICTED: putative exosome complex component rrp40 [Erythranthe
guttata]
gb|EYU42566.1| hypothetical protein MIMGU_mgv1a012779mg [Erythranthe guttata]
Length = 240
Score = 101 bits (252), Expect(4) = 2e-43
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QD D I+VMKAGKLRFSKPNKYWVESS KRYVPSVG++VLGIVV+ +ADNF VDI+
Sbjct: 38 GGLCQDGDVISVMKAGKLRFSKPNKYWVESSHKRYVPSVGDNVLGIVVEARADNFFVDIK 97
Score = 51.6 bits (122), Expect(4) = 2e-43
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG ALAFLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPALAFLPVLAFEGGTRRNIPKFE 121
Score = 50.1 bits (118), Expect(4) = 2e-43
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = -2
Query: 504 AKPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
AKP+ +P+S++DQ V PGD+V+DLS M NQTIKL
Sbjct: 3 AKPSVAPSSFIDQQVFPGDLVLDLSKMTNQTIKL 36
Score = 42.0 bits (97), Expect(4) = 2e-43
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
+ GTLLYVR+V+AN GMNPE++ D F ++T LS+ LL S T
Sbjct: 121 ETGTLLYVRVVKANTGMNPELSCTDAMGKAAEYGPLKDGFMFESSTGLSRTLLSSPT 177
>ref|XP_022738928.1| putative exosome complex component rrp40 isoform X1 [Durio
zibethinus]
ref|XP_022738929.1| putative exosome complex component rrp40 isoform X1 [Durio
zibethinus]
Length = 240
Score = 103 bits (256), Expect(4) = 2e-43
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI+ MKAG LRFSKPNKYWVESSQKRYVP V ++VLGIVVD++ADNFL+D++
Sbjct: 38 GGLRQDCDAISAMKAGTLRFSKPNKYWVESSQKRYVPCVEDTVLGIVVDSKADNFLIDVK 97
Score = 51.6 bits (122), Expect(4) = 2e-43
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
K +NSP S++D VVPGDVV+DLS+M NQT+KL
Sbjct: 4 KQSNSPASFIDSTVVPGDVVLDLSSMTNQTVKL 36
Score = 48.9 bits (115), Expect(4) = 2e-43
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG A+ FLPVLAFEGGTRRNIPKFE
Sbjct: 97 KGPAVGFLPVLAFEGGTRRNIPKFE 121
Score = 41.2 bits (95), Expect(4) = 2e-43
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
+VGTLLY+R+V+AN GMNPE++ D F +T LS+ LL S T
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDAGGKAAEFGPLKDGYMFETSTGLSRKLLSSPT 177
>ref|XP_004298940.1| PREDICTED: putative exosome complex component rrp40 [Fragaria vesca
subsp. vesca]
Length = 241
Score = 102 bits (254), Expect(4) = 3e-43
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = -1
Query: 400 GGLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GGL QDCDAI MKAG LRFSKPNKYWVE+SQKRYVP V +SVLGI+VD++ADNFLVDI+
Sbjct: 35 GGLRQDCDAIAAMKAGTLRFSKPNKYWVETSQKRYVPCVEDSVLGIMVDSKADNFLVDIK 94
Score = 50.4 bits (119), Expect(4) = 3e-43
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG +LAFLPVLAFEGGTRRNIPKFE
Sbjct: 94 KGPSLAFLPVLAFEGGTRRNIPKFE 118
Score = 47.4 bits (111), Expect(4) = 3e-43
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = -2
Query: 489 SPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
+P ++VDQ VVPGDVV+DL+ MANQTIKL
Sbjct: 5 APANFVDQSVVPGDVVLDLTNMANQTIKL 33
Score = 44.3 bits (103), Expect(4) = 3e-43
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIAFM-------------DNTFFTANTFLSKWLLGSLT 7
+VGTLLYVR+V+AN GMNPE++ M D F +T LS+ LL S T
Sbjct: 118 EVGTLLYVRVVKANPGMNPELSCMDAGGKAAEYGPLKDGYMFECSTGLSRMLLSSPT 174
>gb|OVA07587.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Macleaya cordata]
Length = 241
Score = 102 bits (253), Expect(4) = 3e-43
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = -1
Query: 397 GLLQDCDAITVMKAGKLRFSKPNKYWVESSQKRYVPSVGESVLGIVVDTQADNFLVDIR 221
GL QDCDAI+VMK+GKLRFSKPNKYWVESSQKRYVP ++VLGIVVD +ADNFLVDI+
Sbjct: 40 GLRQDCDAISVMKSGKLRFSKPNKYWVESSQKRYVPCAEDTVLGIVVDQRADNFLVDIK 98
Score = 51.6 bits (122), Expect(4) = 3e-43
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3
Query: 224 KGSALAFLPVLAFEGGTRRNIPKFE 150
KG ALAFLPVLAFEGGTRRNIPKFE
Sbjct: 98 KGPALAFLPVLAFEGGTRRNIPKFE 122
Score = 48.5 bits (114), Expect(4) = 3e-43
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = -2
Query: 501 KPANSPTSYVDQLVVPGDVVMDLSTMANQTIKL 403
K ++S T+ VD++VVPGDVV+DLS MANQTIKL
Sbjct: 5 KHSDSQTTLVDKIVVPGDVVLDLSKMANQTIKL 37
Score = 42.4 bits (98), Expect(4) = 3e-43
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Frame = -2
Query: 138 QVGTLLYVRIVEANVGMNPEIA-------------FMDNTFFTANTFLSKWLLGSLT 7
+VGTL+YVR+V+AN GMNPE++ D F ++T LS+ LL S T
Sbjct: 122 EVGTLIYVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYTFESSTGLSRMLLSSPT 178