BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00013637
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021651473.1| putative exosome complex component rrp40 [He...   248   3e-81
ref|XP_023923244.1| putative exosome complex component rrp40 [Qu...   248   3e-81
ref|XP_018821286.1| PREDICTED: putative exosome complex componen...   247   1e-80
ref|XP_011071845.1| putative exosome complex component rrp40 [Se...   246   3e-80
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   244   7e-80
ref|XP_017249653.1| PREDICTED: putative exosome complex componen...   244   8e-80
ref|XP_012080072.1| putative exosome complex component rrp40 [Ja...   244   8e-80
ref|XP_023743525.1| putative exosome complex component rrp40 [La...   242   6e-79
gb|PKI66653.1| hypothetical protein CRG98_012995 [Punica granatum]    242   8e-79
ref|XP_002318044.1| exonuclease-related family protein [Populus ...   241   1e-78
ref|XP_012478611.1| PREDICTED: putative exosome complex componen...   240   1e-78
gb|PNT10070.1| hypothetical protein POPTR_012G080300v3 [Populus ...   241   1e-78
ref|XP_010251261.1| PREDICTED: putative exosome complex componen...   241   2e-78
ref|XP_008239762.1| PREDICTED: putative exosome complex componen...   241   2e-78
gb|PNT10069.1| hypothetical protein POPTR_012G080300v3 [Populus ...   238   2e-78
ref|XP_022016471.1| putative exosome complex component rrp40 [He...   241   2e-78
gb|OMO81471.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ...   241   2e-78
emb|CDP12399.1| unnamed protein product [Coffea canephora]            240   3e-78
ref|XP_011044305.1| PREDICTED: putative exosome complex componen...   240   4e-78
ref|XP_012478610.1| PREDICTED: putative exosome complex componen...   240   5e-78

>ref|XP_021651473.1| putative exosome complex component rrp40 [Hevea brasiliensis]
          Length = 241

 Score =  248 bits (633), Expect = 3e-81
 Identities = 120/140 (85%), Positives = 132/140 (94%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SP  ++DQ+VVPGDVVLDLSTMTNQTIKLGGGLRQD DAI+V+K GKLRFSKPNKYWVES
Sbjct: 8   SPMSFIDQIVVPGDVVLDLSTMTNQTIKLGGGLRQDSDAISVMKAGKLRFSKPNKYWVES 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP VGD+VLG+VVD+KA+NFLVDIKGPALAFLPVLAFEGGTRRNIPKFE GTLLY
Sbjct: 68  SQKRYVPCVGDSVLGIVVDSKAENFLVDIKGPALAFLPVLAFEGGTRRNIPKFEGGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           VR+VKAN G+NPEL+C DAS
Sbjct: 128 VRVVKANPGMNPELSCTDAS 147


>ref|XP_023923244.1| putative exosome complex component rrp40 [Quercus suber]
 gb|POE97101.1| putative exosome complex component rrp40 [Quercus suber]
          Length = 243

 Score =  248 bits (633), Expect = 3e-81
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SPT +VDQ VVPGDVVLDLS MTNQT+KLGGGLRQDCDAI+V+K GKLRFS PNKYWVES
Sbjct: 8   SPTSFVDQSVVPGDVVLDLSNMTNQTLKLGGGLRQDCDAISVMKAGKLRFSNPNKYWVES 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP  GD+VLG+VVD+KADNFLVDIKGP LAFLPVLAFEGGTRRNIP+FE+GTLLY
Sbjct: 68  SQKRYVPHAGDSVLGIVVDSKADNFLVDIKGPGLAFLPVLAFEGGTRRNIPRFEIGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           VR+VKAN G+NPEL+C DAS
Sbjct: 128 VRVVKANPGMNPELSCTDAS 147


>ref|XP_018821286.1| PREDICTED: putative exosome complex component rrp40 [Juglans regia]
          Length = 243

 Score =  247 bits (630), Expect = 1e-80
 Identities = 120/144 (83%), Positives = 131/144 (90%)
 Frame = -3

Query: 434 NSAYSPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKY 255
           N + SP  +VDQLVVPGDVVLDL++MTNQTIKLGGGLRQDCDAI V K GKLR SKPNKY
Sbjct: 4   NPSGSPASFVDQLVVPGDVVLDLNSMTNQTIKLGGGLRQDCDAIAVTKAGKLRCSKPNKY 63

Query: 254 WVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVG 75
           WVESSQKRY P  GD+VLG+VVD+KADNFLVDIKGPALA+LPVLAFEGGTRRNIPKFEVG
Sbjct: 64  WVESSQKRYEPHAGDSVLGIVVDSKADNFLVDIKGPALAYLPVLAFEGGTRRNIPKFEVG 123

Query: 74  TLLYVRIVKANAGINPELACMDAS 3
           TLLYVR+VKAN G+NPEL+C DAS
Sbjct: 124 TLLYVRVVKANPGMNPELSCTDAS 147


>ref|XP_011071845.1| putative exosome complex component rrp40 [Sesamum indicum]
 ref|XP_011071846.1| putative exosome complex component rrp40 [Sesamum indicum]
 ref|XP_011071847.1| putative exosome complex component rrp40 [Sesamum indicum]
          Length = 240

 Score =  246 bits (627), Expect = 3e-80
 Identities = 119/140 (85%), Positives = 128/140 (91%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SP+ +VDQ V PGDVVLDLS MTNQTIKLGGGLRQD D I+V+K GKLRFSKPNKYWVES
Sbjct: 8   SPSSFVDQQVFPGDVVLDLSKMTNQTIKLGGGLRQDGDVISVMKAGKLRFSKPNKYWVES 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           S KRYVPS GDNVLG+VVD KADNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE+GTLLY
Sbjct: 68  SHKRYVPSAGDNVLGIVVDAKADNFLVDIKGPMLAFLPVLAFEGGTRRNIPKFEIGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           VR+VKAN G+NPEL+CMDAS
Sbjct: 128 VRVVKANTGMNPELSCMDAS 147


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Vitis vinifera]
 emb|CBI15022.3| unnamed protein product, partial [Vitis vinifera]
          Length = 237

 Score =  244 bits (624), Expect = 7e-80
 Identities = 119/140 (85%), Positives = 127/140 (90%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           +P  +VDQLVVPGDVVLDLS M NQTIKLGGGL QDCDAITV K G+LRFSKPNKYWVES
Sbjct: 5   TPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVES 64

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP V D VLG+VVD+KADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE GTLLY
Sbjct: 65  SQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLY 124

Query: 62  VRIVKANAGINPELACMDAS 3
           VR+VKAN G+NPEL+C DAS
Sbjct: 125 VRVVKANTGMNPELSCTDAS 144


>ref|XP_017249653.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Daucus carota subsp. sativus]
 gb|KZM93240.1| hypothetical protein DCAR_016485 [Daucus carota subsp. sativus]
          Length = 241

 Score =  244 bits (624), Expect = 8e-80
 Identities = 115/136 (84%), Positives = 130/136 (95%)
 Frame = -3

Query: 410 YVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVESSQKR 231
           Y+D+LVVPGDVVLDLS+M+NQTIKLGGGLRQDCD+IT +K G LRFSKPNKYWVESSQKR
Sbjct: 13  YIDKLVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAMKAGMLRFSKPNKYWVESSQKR 72

Query: 230 YVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLYVRIV 51
           YVPS GD VLG+VVDTKA+NFL+DIKGPALA+LPVLAFEGGTRRNIPKFEVGTL+YVR+V
Sbjct: 73  YVPSAGDAVLGIVVDTKAENFLIDIKGPALAYLPVLAFEGGTRRNIPKFEVGTLIYVRVV 132

Query: 50  KANAGINPELACMDAS 3
           KAN G+NP+L+CMDAS
Sbjct: 133 KANIGMNPDLSCMDAS 148


>ref|XP_012080072.1| putative exosome complex component rrp40 [Jatropha curcas]
 gb|KDP31104.1| hypothetical protein JCGZ_11480 [Jatropha curcas]
          Length = 241

 Score =  244 bits (624), Expect = 8e-80
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SPT  VD+LVVPGDVV+DLSTM+NQTIKLGGGLRQDCDAI+V K+GKLRFSKPNKYWVE 
Sbjct: 8   SPTSLVDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGKLRFSKPNKYWVEG 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP   D+VLG+VVD+KA+NFLVDIKGP LAFLPVLAFEGGTRRNIPKFEVGTLLY
Sbjct: 68  SQKRYVPCAEDSVLGIVVDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           VR+VKAN G+NPEL+C DAS
Sbjct: 128 VRVVKANPGMNPELSCTDAS 147


>ref|XP_023743525.1| putative exosome complex component rrp40 [Lactuca sativa]
 gb|PLY66375.1| hypothetical protein LSAT_4X75321 [Lactuca sativa]
          Length = 241

 Score =  242 bits (618), Expect = 6e-79
 Identities = 117/143 (81%), Positives = 132/143 (92%)
 Frame = -3

Query: 431 SAYSPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYW 252
           S+ SP+ +VDQLVVPGDV+LDLS+M NQTIKLGGGLRQD D+I+V+K G LRF+KPNKYW
Sbjct: 6   SSTSPSTFVDQLVVPGDVILDLSSMANQTIKLGGGLRQDGDSISVMKAGTLRFTKPNKYW 65

Query: 251 VESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 72
           VESS KRYVPS GDNVLGVVVDTK +NFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT
Sbjct: 66  VESSHKRYVPSAGDNVLGVVVDTKPENFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 125

Query: 71  LLYVRIVKANAGINPELACMDAS 3
           LLYVR+V AN G+NPEL+CM+A+
Sbjct: 126 LLYVRVVNANTGMNPELSCMEAN 148


>gb|PKI66653.1| hypothetical protein CRG98_012995 [Punica granatum]
          Length = 240

 Score =  242 bits (617), Expect = 8e-79
 Identities = 119/143 (83%), Positives = 128/143 (89%)
 Frame = -3

Query: 431 SAYSPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYW 252
           S+ SP+  VDQ VVPGDVVLDLSTM NQTIKLGGGLRQD D ITV+K G+LRF KPNKYW
Sbjct: 5   SSGSPSSLVDQPVVPGDVVLDLSTMPNQTIKLGGGLRQDADVITVMKAGRLRFLKPNKYW 64

Query: 251 VESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 72
           VESSQKRYVP V DNVLG+VVDTKADNFLVDIKGPA+AFLPVLAFEGGTRRNIPKFE GT
Sbjct: 65  VESSQKRYVPRVDDNVLGIVVDTKADNFLVDIKGPAIAFLPVLAFEGGTRRNIPKFEAGT 124

Query: 71  LLYVRIVKANAGINPELACMDAS 3
           L+YVR+VKAN G NPEL+C DAS
Sbjct: 125 LVYVRVVKANPGTNPELSCTDAS 147


>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
 gb|ABK93275.1| unknown [Populus trichocarpa]
 gb|PNT10068.1| hypothetical protein POPTR_012G080300v3 [Populus trichocarpa]
          Length = 242

 Score =  241 bits (616), Expect = 1e-78
 Identities = 115/143 (80%), Positives = 131/143 (91%)
 Frame = -3

Query: 431 SAYSPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYW 252
           S+ SP  ++D LVVPGDVV+DLS+MTNQTIKLG GLRQDCDAI+V+K GKLRFSKPNKYW
Sbjct: 5   SSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYW 64

Query: 251 VESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 72
           VE+SQKRYVP   D+VLG+VVD+K+DNFL+DIKGPALAFLPVLAFEGGTRRNIPKFE GT
Sbjct: 65  VETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEAGT 124

Query: 71  LLYVRIVKANAGINPELACMDAS 3
           LLYVR+VKAN G+NPEL+C DAS
Sbjct: 125 LLYVRVVKANPGMNPELSCTDAS 147


>ref|XP_012478611.1| PREDICTED: putative exosome complex component rrp40 isoform X2
           [Gossypium raimondii]
 gb|KJB30310.1| hypothetical protein B456_005G137000 [Gossypium raimondii]
          Length = 202

 Score =  240 bits (612), Expect = 1e-78
 Identities = 113/140 (80%), Positives = 127/140 (90%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SP  +VD  VVPGDVVLDLS+MTNQTIKLGGGLRQDCDAI+ +K G LRFSKPNKYW+ES
Sbjct: 8   SPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKPNKYWIES 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP V D +LG+VVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKFEVGTLLY
Sbjct: 68  SQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           +R+VKAN G+NPEL+C DAS
Sbjct: 128 LRVVKANFGMNPELSCTDAS 147


>gb|PNT10070.1| hypothetical protein POPTR_012G080300v3 [Populus trichocarpa]
          Length = 246

 Score =  241 bits (616), Expect = 1e-78
 Identities = 115/143 (80%), Positives = 131/143 (91%)
 Frame = -3

Query: 431 SAYSPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYW 252
           S+ SP  ++D LVVPGDVV+DLS+MTNQTIKLG GLRQDCDAI+V+K GKLRFSKPNKYW
Sbjct: 5   SSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYW 64

Query: 251 VESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 72
           VE+SQKRYVP   D+VLG+VVD+K+DNFL+DIKGPALAFLPVLAFEGGTRRNIPKFE GT
Sbjct: 65  VETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEAGT 124

Query: 71  LLYVRIVKANAGINPELACMDAS 3
           LLYVR+VKAN G+NPEL+C DAS
Sbjct: 125 LLYVRVVKANPGMNPELSCTDAS 147


>ref|XP_010251261.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Nelumbo nucifera]
          Length = 243

 Score =  241 bits (615), Expect = 2e-78
 Identities = 114/138 (82%), Positives = 128/138 (92%)
 Frame = -3

Query: 416 TGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVESSQ 237
           T ++DQ+VVPGDVVLDLS+M+NQTIKLGGGLRQDCD I+V+K GKL+FSKPNKYWVESSQ
Sbjct: 10  TSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGKLKFSKPNKYWVESSQ 69

Query: 236 KRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLYVR 57
           KRYVP V D +LG VVD+KADNFLVDIKGP LAFLPVLAFEGGTRRNIPK+E GTLLYVR
Sbjct: 70  KRYVPCVEDTILGTVVDSKADNFLVDIKGPTLAFLPVLAFEGGTRRNIPKYEAGTLLYVR 129

Query: 56  IVKANAGINPELACMDAS 3
           +VKANAG+NPEL+C DAS
Sbjct: 130 VVKANAGMNPELSCTDAS 147


>ref|XP_008239762.1| PREDICTED: putative exosome complex component rrp40 [Prunus mume]
          Length = 243

 Score =  241 bits (615), Expect = 2e-78
 Identities = 113/140 (80%), Positives = 128/140 (91%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SP  +VDQ VVPGDVVLDL++M NQTIKLGGGLRQDCDAIT +K G L+FSKPNKYWVE+
Sbjct: 8   SPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAITAMKAGTLKFSKPNKYWVET 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP  GD+VLG+V D+KADNFLVDIKGP +AFLPVLAFEGGTRRN+PKFEVGTLLY
Sbjct: 68  SQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNVPKFEVGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           VR+VKAN G+NPEL+C+DAS
Sbjct: 128 VRVVKANPGMNPELSCIDAS 147


>gb|PNT10069.1| hypothetical protein POPTR_012G080300v3 [Populus trichocarpa]
          Length = 171

 Score =  238 bits (608), Expect = 2e-78
 Identities = 113/141 (80%), Positives = 129/141 (91%)
 Frame = -3

Query: 431 SAYSPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYW 252
           S+ SP  ++D LVVPGDVV+DLS+MTNQTIKLG GLRQDCDAI+V+K GKLRFSKPNKYW
Sbjct: 5   SSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYW 64

Query: 251 VESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 72
           VE+SQKRYVP   D+VLG+VVD+K+DNFL+DIKGPALAFLPVLAFEGGTRRNIPKFE GT
Sbjct: 65  VETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEAGT 124

Query: 71  LLYVRIVKANAGINPELACMD 9
           LLYVR+VKAN G+NPEL+C D
Sbjct: 125 LLYVRVVKANPGMNPELSCTD 145


>ref|XP_022016471.1| putative exosome complex component rrp40 [Helianthus annuus]
 gb|OTF90842.1| putative polyribonucleotide nucleotidyltransferase, Exosome complex
           RNA-binding protein 1/RRP40/RRP4 [Helianthus annuus]
          Length = 236

 Score =  241 bits (614), Expect = 2e-78
 Identities = 116/139 (83%), Positives = 127/139 (91%)
 Frame = -3

Query: 419 PTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVESS 240
           P+  VDQLVVPGDV+LDLS M NQT+KLGGGLRQD D+I V+K GKLRF KPNKYWVESS
Sbjct: 5   PSNLVDQLVVPGDVILDLSNMANQTLKLGGGLRQDGDSICVMKAGKLRFMKPNKYWVESS 64

Query: 239 QKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLYV 60
           QKRYVPS GDNVLGVVVDTK +NFLVDIKGPALAFLPVL+FEGGTRRNIPKFEVGTLLYV
Sbjct: 65  QKRYVPSAGDNVLGVVVDTKPENFLVDIKGPALAFLPVLSFEGGTRRNIPKFEVGTLLYV 124

Query: 59  RIVKANAGINPELACMDAS 3
           R+V AN G+NPEL+CMDA+
Sbjct: 125 RVVSANTGMNPELSCMDAN 143


>gb|OMO81471.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
           capsularis]
          Length = 240

 Score =  241 bits (614), Expect = 2e-78
 Identities = 115/140 (82%), Positives = 128/140 (91%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SP  ++D  VVPGDVVLDLS+MTNQTIKLGGGLRQDCDAI+V+K G LRF+KPNKYWVES
Sbjct: 8   SPASFIDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGTLRFTKPNKYWVES 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP V D VLG+VVD+KADN L+DIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY
Sbjct: 68  SQKRYVPCVEDTVLGIVVDSKADNLLIDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           +R+VKAN G+NPEL+C DAS
Sbjct: 128 LRVVKANFGMNPELSCTDAS 147


>emb|CDP12399.1| unnamed protein product [Coffea canephora]
          Length = 240

 Score =  240 bits (613), Expect = 3e-78
 Identities = 116/140 (82%), Positives = 127/140 (90%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SP  ++DQ VVPGDVVLDLSTMTNQTIKLG GLRQD DAI+ IK G LRF+KPNKYWVES
Sbjct: 8   SPPNFIDQQVVPGDVVLDLSTMTNQTIKLGSGLRQDGDAISAIKAGVLRFAKPNKYWVES 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP  GD VLG+VVD+++DNFLVDIKGP LAFLPVLAFEGGTRRNIPKFEVGTLLY
Sbjct: 68  SQKRYVPCAGDTVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           VR+VKAN G+NPEL+CMDAS
Sbjct: 128 VRVVKANVGMNPELSCMDAS 147


>ref|XP_011044305.1| PREDICTED: putative exosome complex component rrp40 [Populus
           euphratica]
          Length = 242

 Score =  240 bits (613), Expect = 4e-78
 Identities = 113/143 (79%), Positives = 132/143 (92%)
 Frame = -3

Query: 431 SAYSPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYW 252
           S+ SP  ++D LVVPGDVV+DLS+MTNQTIKLGGGLRQDCDAI+V+K GKLRFSKPNKYW
Sbjct: 5   SSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGGGLRQDCDAISVMKAGKLRFSKPNKYW 64

Query: 251 VESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 72
           VE+SQKRYVP   D++LG+VVD+K+DNFL+D+KGPALAFLPVLAFEGGTRRNIPKFE GT
Sbjct: 65  VETSQKRYVPCAEDSILGIVVDSKSDNFLIDMKGPALAFLPVLAFEGGTRRNIPKFEAGT 124

Query: 71  LLYVRIVKANAGINPELACMDAS 3
           LLYVR+VKAN G++PEL+C DAS
Sbjct: 125 LLYVRVVKANPGMSPELSCTDAS 147


>ref|XP_012478610.1| PREDICTED: putative exosome complex component rrp40 isoform X1
           [Gossypium raimondii]
 gb|KJB30309.1| hypothetical protein B456_005G137000 [Gossypium raimondii]
          Length = 240

 Score =  240 bits (612), Expect = 5e-78
 Identities = 113/140 (80%), Positives = 127/140 (90%)
 Frame = -3

Query: 422 SPTGYVDQLVVPGDVVLDLSTMTNQTIKLGGGLRQDCDAITVIKTGKLRFSKPNKYWVES 243
           SP  +VD  VVPGDVVLDLS+MTNQTIKLGGGLRQDCDAI+ +K G LRFSKPNKYW+ES
Sbjct: 8   SPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKPNKYWIES 67

Query: 242 SQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLLY 63
           SQKRYVP V D +LG+VVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKFEVGTLLY
Sbjct: 68  SQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVGTLLY 127

Query: 62  VRIVKANAGINPELACMDAS 3
           +R+VKAN G+NPEL+C DAS
Sbjct: 128 LRVVKANFGMNPELSCTDAS 147