BLASTX nr result

ID: Acanthopanax24_contig00013416 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00013416
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017226877.1| PREDICTED: probable E3 ubiquitin-protein lig...    59   5e-07

>ref|XP_017226877.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Daucus
           carota subsp. sativus]
 gb|KZM81977.1| hypothetical protein DCAR_029590 [Daucus carota subsp. sativus]
          Length = 320

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 25/34 (73%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = -1

Query: 521 ENSMETVSSGWPSWPME-EGGDEEIGMSGRANDG 423
           ENS+ETVSSGWP+WP+E EGGD+E+G S R NDG
Sbjct: 282 ENSVETVSSGWPAWPLEGEGGDQEVGASSRGNDG 315


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