BLASTX nr result
ID: Acanthopanax24_contig00013219
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00013219
(550 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017250117.1| PREDICTED: probable small nuclear ribonucleo... 90 3e-20
ref|XP_017245026.1| PREDICTED: probable small nuclear ribonucleo... 90 3e-20
gb|KZM99664.1| hypothetical protein DCAR_012974 [Daucus carota s... 90 4e-20
ref|XP_023751373.1| probable small nuclear ribonucleoprotein F [... 89 1e-19
gb|KVI09670.1| Like-Sm (LSM) domain-containing protein [Cynara c... 89 1e-19
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 89 1e-19
gb|PLY62892.1| hypothetical protein LSAT_0X46661 [Lactuca sativa] 89 1e-19
ref|XP_020270060.1| probable small nuclear ribonucleoprotein F [... 87 3e-19
ref|XP_010928662.1| PREDICTED: probable small nuclear ribonucleo... 87 3e-19
gb|PON88471.1| Sm-like protein Lsm6/SmF [Trema orientalis] 87 3e-19
ref|XP_022006106.1| probable small nuclear ribonucleoprotein F [... 87 3e-19
ref|XP_004299869.1| PREDICTED: probable small nuclear ribonucleo... 87 3e-19
ref|XP_008218678.1| PREDICTED: probable small nuclear ribonucleo... 87 3e-19
gb|PON80702.1| Sm-like protein Lsm6/SmF [Parasponia andersonii] 87 3e-19
ref|XP_007223820.1| probable small nuclear ribonucleoprotein F [... 87 3e-19
ref|XP_020265853.1| probable small nuclear ribonucleoprotein F i... 87 3e-19
ref|XP_009380758.1| PREDICTED: probable small nuclear ribonucleo... 87 4e-19
ref|XP_009401060.1| PREDICTED: probable small nuclear ribonucleo... 87 4e-19
ref|XP_013893567.1| putative small nuclear ribonucleoprotein F [... 87 5e-19
ref|XP_019703499.1| PREDICTED: probable small nuclear ribonucleo... 86 5e-19
>ref|XP_017250117.1| PREDICTED: probable small nuclear ribonucleoprotein F [Daucus
carota subsp. sativus]
Length = 88
Score = 89.7 bits (221), Expect = 3e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ ANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP
Sbjct: 34 LVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 77
>ref|XP_017245026.1| PREDICTED: probable small nuclear ribonucleoprotein F [Daucus
carota subsp. sativus]
Length = 88
Score = 89.7 bits (221), Expect = 3e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ ANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP
Sbjct: 34 LVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 77
>gb|KZM99664.1| hypothetical protein DCAR_012974 [Daucus carota subsp. sativus]
Length = 93
Score = 89.7 bits (221), Expect = 4e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ ANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP
Sbjct: 39 LVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 82
>ref|XP_023751373.1| probable small nuclear ribonucleoprotein F [Lactuca sativa]
ref|XP_023751374.1| probable small nuclear ribonucleoprotein F [Lactuca sativa]
ref|XP_023751375.1| probable small nuclear ribonucleoprotein F [Lactuca sativa]
ref|XP_023748149.1| probable small nuclear ribonucleoprotein F [Lactuca sativa]
gb|PLY94748.1| hypothetical protein LSAT_2X104060 [Lactuca sativa]
gb|PLY94754.1| hypothetical protein LSAT_2X104100 [Lactuca sativa]
Length = 88
Score = 88.6 bits (218), Expect = 1e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ ANSEEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>gb|KVI09670.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 88
Score = 88.6 bits (218), Expect = 1e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ ANSEEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera]
emb|CBI23345.3| unnamed protein product, partial [Vitis vinifera]
Length = 88
Score = 88.6 bits (218), Expect = 1e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ ANSEEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>gb|PLY62892.1| hypothetical protein LSAT_0X46661 [Lactuca sativa]
Length = 100
Score = 88.6 bits (218), Expect = 1e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ ANSEEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 46 LVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYLRGVP 89
>ref|XP_020270060.1| probable small nuclear ribonucleoprotein F [Asparagus officinalis]
ref|XP_020265854.1| probable small nuclear ribonucleoprotein F isoform X2 [Asparagus
officinalis]
Length = 86
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_010928662.1| PREDICTED: probable small nuclear ribonucleoprotein F [Elaeis
guineensis]
Length = 86
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>gb|PON88471.1| Sm-like protein Lsm6/SmF [Trema orientalis]
Length = 88
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_022006106.1| probable small nuclear ribonucleoprotein F [Helianthus annuus]
gb|OTF99371.1| putative small nuclear ribonucleoprotein F [Helianthus annuus]
Length = 88
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ +NSEEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLSNSEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_004299869.1| PREDICTED: probable small nuclear ribonucleoprotein F [Fragaria
vesca subsp. vesca]
ref|XP_024169086.1| probable small nuclear ribonucleoprotein F [Rosa chinensis]
gb|PRQ20710.1| putative sm-like protein Lsm6/SmF [Rosa chinensis]
Length = 88
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_008218678.1| PREDICTED: probable small nuclear ribonucleoprotein F [Prunus mume]
Length = 90
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>gb|PON80702.1| Sm-like protein Lsm6/SmF [Parasponia andersonii]
Length = 91
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_007223820.1| probable small nuclear ribonucleoprotein F [Prunus persica]
gb|ONI36415.1| hypothetical protein PRUPE_1G584000 [Prunus persica]
Length = 91
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_020265853.1| probable small nuclear ribonucleoprotein F isoform X1 [Asparagus
officinalis]
gb|ONK70545.1| uncharacterized protein A4U43_C05F34820 [Asparagus officinalis]
Length = 94
Score = 87.4 bits (215), Expect = 3e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 42 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVP 85
>ref|XP_009380758.1| PREDICTED: probable small nuclear ribonucleoprotein F [Musa
acuminata subsp. malaccensis]
ref|XP_018674908.1| PREDICTED: probable small nuclear ribonucleoprotein F [Musa
acuminata subsp. malaccensis]
ref|XP_018674909.1| PREDICTED: probable small nuclear ribonucleoprotein F [Musa
acuminata subsp. malaccensis]
Length = 86
Score = 87.0 bits (214), Expect = 4e-19
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQFTGNLGEIL+RCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYIDGQFTGNLGEILVRCNNVLYLRGVP 77
>ref|XP_009401060.1| PREDICTED: probable small nuclear ribonucleoprotein F [Musa
acuminata subsp. malaccensis]
Length = 86
Score = 87.0 bits (214), Expect = 4e-19
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEY+DGQFTGNLGEILIRCNNVLY+RGVP
Sbjct: 34 LVSVDSYMNLQLANTEEYVDGQFTGNLGEILIRCNNVLYLRGVP 77
>ref|XP_013893567.1| putative small nuclear ribonucleoprotein F [Monoraphidium
neglectum]
gb|KIY94547.1| putative small nuclear ribonucleoprotein F [Monoraphidium
neglectum]
Length = 83
Score = 86.7 bits (213), Expect = 5e-19
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EE+IDGQFTGNLGE+LIRCNNVLYMRGVP
Sbjct: 35 LVSVDSYMNLQLANTEEFIDGQFTGNLGEVLIRCNNVLYMRGVP 78
>ref|XP_019703499.1| PREDICTED: probable small nuclear ribonucleoprotein F isoform X3
[Elaeis guineensis]
Length = 59
Score = 85.9 bits (211), Expect = 5e-19
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -1
Query: 550 LVSVDSYMNLQRANSEEYIDGQFTGNLGEILIRCNNVLYMRGVP 419
LVSVDSYMNLQ AN+EEYIDGQF+GNLGEILIRCNNVLY+RGVP
Sbjct: 7 LVSVDSYMNLQLANTEEYIDGQFSGNLGEILIRCNNVLYLRGVP 50