BLASTX nr result
ID: Acanthopanax24_contig00013000
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00013000
(770 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017252403.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-36
ref|XP_017252401.1| PREDICTED: pentatricopeptide repeat-containi... 145 5e-36
gb|KZM93266.1| hypothetical protein DCAR_016511 [Daucus carota s... 145 5e-36
ref|XP_016650996.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-29
ref|XP_021808400.1| pentatricopeptide repeat-containing protein ... 123 3e-28
emb|CBI15105.3| unnamed protein product, partial [Vitis vinifera] 120 3e-27
emb|CDP14915.1| unnamed protein product [Coffea canephora] 120 3e-27
gb|POE48242.1| pentatricopeptide repeat-containing protein, chlo... 120 3e-27
ref|XP_023902294.1| pentatricopeptide repeat-containing protein ... 120 3e-27
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi... 120 3e-27
ref|XP_006439718.1| pentatricopeptide repeat-containing protein ... 120 3e-27
ref|XP_020419269.1| pentatricopeptide repeat-containing protein ... 119 6e-27
dbj|GAY38955.1| hypothetical protein CUMW_040670 [Citrus unshiu] 119 8e-27
ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containi... 118 2e-26
ref|XP_018831512.1| PREDICTED: pentatricopeptide repeat-containi... 118 2e-26
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi... 117 4e-26
ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containi... 117 4e-26
ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containi... 116 1e-25
ref|XP_021291970.1| pentatricopeptide repeat-containing protein ... 115 2e-25
ref|XP_015883630.1| PREDICTED: pentatricopeptide repeat-containi... 114 6e-25
>ref|XP_017252403.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Daucus carota subsp. sativus]
Length = 734
Score = 145 bits (367), Expect = 4e-36
Identities = 71/104 (68%), Positives = 83/104 (79%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRI+CQR QLKRILSG++ P + +
Sbjct: 629 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIICQRPQLKRILSGKDSPLGAIKGE 688
Query: 182 DIVALSNSPFPPERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
DI+ LSNSPFPPE+R + N R Q+G V+ T R + EL+TS
Sbjct: 689 DIIPLSNSPFPPEKRATIDNSNRSQNGNVEKGTKRRSKPELMTS 732
>ref|XP_017252401.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Daucus carota subsp. sativus]
Length = 864
Score = 145 bits (367), Expect = 5e-36
Identities = 71/104 (68%), Positives = 83/104 (79%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRI+CQR QLKRILSG++ P + +
Sbjct: 759 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIICQRPQLKRILSGKDSPLGAIKGE 818
Query: 182 DIVALSNSPFPPERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
DI+ LSNSPFPPE+R + N R Q+G V+ T R + EL+TS
Sbjct: 819 DIIPLSNSPFPPEKRATIDNSNRSQNGNVEKGTKRRSKPELMTS 862
>gb|KZM93266.1| hypothetical protein DCAR_016511 [Daucus carota subsp. sativus]
Length = 873
Score = 145 bits (367), Expect = 5e-36
Identities = 71/104 (68%), Positives = 83/104 (79%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRI+CQR QLKRILSG++ P + +
Sbjct: 768 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIICQRPQLKRILSGKDSPLGAIKGE 827
Query: 182 DIVALSNSPFPPERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
DI+ LSNSPFPPE+R + N R Q+G V+ T R + EL+TS
Sbjct: 828 DIIPLSNSPFPPEKRATIDNSNRSQNGNVEKGTKRRSKPELMTS 871
>ref|XP_016650996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Prunus mume]
Length = 876
Score = 125 bits (315), Expect = 5e-29
Identities = 64/106 (60%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSS+T+DFPIAK AYSFL+DN+ SSF FP WNKGRI+CQR QLKRILS EP ++G+E
Sbjct: 770 KSSMTQDFPIAKAAYSFLEDNMPSSFSFPKWNKGRILCQRPQLKRILSSIEPSTDGSERK 829
Query: 182 DIVALSNSPFPPER-RTSPSNVLRGQHGGVDTETNNRMRTELVTSA 316
I+ LSNSPFPP +TS +V G++ V ++ R+RTEL+TSA
Sbjct: 830 KIITLSNSPFPPPGIKTSSKDVNSGRYNDVTSDERLRIRTELLTSA 875
>ref|XP_021808400.1| pentatricopeptide repeat-containing protein At1g74850, chloroplastic
[Prunus avium]
Length = 876
Score = 123 bits (309), Expect = 3e-28
Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSIT+D PIAK A+SFL+DN+ SSF FP WNKGRI+CQR QLKRILS EP ++G+E
Sbjct: 770 KSSITQDLPIAKAAFSFLEDNMPSSFSFPKWNKGRILCQRPQLKRILSSIEPSTDGSERK 829
Query: 182 DIVALSNSPFP-PERRTSPSNVLRGQHGGVDTETNNRMRTELVTSA 316
I+ LSNSPFP P +TS +V G++ V ++ R+RTEL+TSA
Sbjct: 830 KIITLSNSPFPLPGTKTSSKDVNSGRYNDVSSDERLRIRTELLTSA 875
>emb|CBI15105.3| unnamed protein product, partial [Vitis vinifera]
Length = 627
Score = 120 bits (301), Expect = 3e-27
Identities = 67/105 (63%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSITRDFP+AK+AY+FL + VSSSF FPGWNKGRIVCQR QLKRILS E S+ + D
Sbjct: 522 KSSITRDFPVAKSAYAFLNE-VSSSFCFPGWNKGRIVCQRSQLKRILSVTEQHSDEYKKD 580
Query: 182 DIVALSNSPFP-PERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
I+ LSNSPFP P TS SNV R Q D E + RTEL+TS
Sbjct: 581 RIITLSNSPFPLPGTNTSMSNVKRDQLSNADAERSIMTRTELMTS 625
>emb|CDP14915.1| unnamed protein product [Coffea canephora]
Length = 628
Score = 120 bits (301), Expect = 3e-27
Identities = 64/105 (60%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
+SSITRDFP+AK AYS LKD+VSSSF FPGWNKGRIVCQ+ QLKRILS E SE +D
Sbjct: 522 RSSITRDFPVAKAAYSLLKDSVSSSFCFPGWNKGRIVCQKSQLKRILSSTESSSEEHNSD 581
Query: 182 DIVALSNSPFP-PERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
++ +SNSP P E TS S+V R +H ET R R EL TS
Sbjct: 582 AVINISNSPLPFVETGTSRSDVKRRRHESAGIETGFRTRIELTTS 626
>gb|POE48242.1| pentatricopeptide repeat-containing protein, chloroplastic [Quercus
suber]
gb|POE48243.1| pentatricopeptide repeat-containing protein, chloroplastic [Quercus
suber]
Length = 843
Score = 120 bits (301), Expect = 3e-27
Identities = 63/105 (60%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSI+RDFPIAK AYSFL+D VSS F FPGWNKGRI+CQR QLKRILSG E S+G+ D
Sbjct: 737 KSSISRDFPIAKAAYSFLQDKVSSFFSFPGWNKGRIICQRSQLKRILSGTESSSDGSRKD 796
Query: 182 DIVALSNSPFP-PERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
I+ LSNSPF P RT S V+ G +E+ RTE++ S
Sbjct: 797 RIIDLSNSPFNLPGTRTPRSGVMNGHEKDAVSESRIMTRTEMIAS 841
>ref|XP_023902294.1| pentatricopeptide repeat-containing protein At1g74850, chloroplastic
isoform X1 [Quercus suber]
ref|XP_023902295.1| pentatricopeptide repeat-containing protein At1g74850, chloroplastic
isoform X2 [Quercus suber]
Length = 865
Score = 120 bits (301), Expect = 3e-27
Identities = 63/105 (60%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSI+RDFPIAK AYSFL+D VSS F FPGWNKGRI+CQR QLKRILSG E S+G+ D
Sbjct: 759 KSSISRDFPIAKAAYSFLQDKVSSFFSFPGWNKGRIICQRSQLKRILSGTESSSDGSRKD 818
Query: 182 DIVALSNSPFP-PERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
I+ LSNSPF P RT S V+ G +E+ RTE++ S
Sbjct: 819 RIIDLSNSPFNLPGTRTPRSGVMNGHEKDAVSESRIMTRTEMIAS 863
>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 120 bits (301), Expect = 3e-27
Identities = 67/105 (63%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSITRDFP+AK+AY+FL + VSSSF FPGWNKGRIVCQR QLKRILS E S+ + D
Sbjct: 764 KSSITRDFPVAKSAYAFLNE-VSSSFCFPGWNKGRIVCQRSQLKRILSVTEQHSDEYKKD 822
Query: 182 DIVALSNSPFP-PERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
I+ LSNSPFP P TS SNV R Q D E + RTEL+TS
Sbjct: 823 RIITLSNSPFPLPGTNTSMSNVKRDQLSNADAERSIMTRTELMTS 867
>ref|XP_006439718.1| pentatricopeptide repeat-containing protein At1g74850, chloroplastic
[Citrus clementina]
gb|ESR52958.1| hypothetical protein CICLE_v10018817mg [Citrus clementina]
Length = 871
Score = 120 bits (301), Expect = 3e-27
Identities = 59/105 (56%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
++S T D PIAK AY+FL++N SS F FP WNKGRI+CQR QLKRILSGRE S+G++ D
Sbjct: 765 RTSTTEDLPIAKAAYTFLQENASSLFSFPQWNKGRIICQRTQLKRILSGRESSSDGSKKD 824
Query: 182 DIVALSNSPF-PPERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
+I++LSNSPF PP+R+ S + V G ++ET TEL+TS
Sbjct: 825 NIISLSNSPFSPPDRKASTTGVRNGLFDNANSETKMSASTELMTS 869
>ref|XP_020419269.1| pentatricopeptide repeat-containing protein At1g74850, chloroplastic
[Prunus persica]
gb|ONI08500.1| hypothetical protein PRUPE_5G181900 [Prunus persica]
Length = 876
Score = 119 bits (299), Expect = 6e-27
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSS+T+D PIAK AYSFL+DN+ SSF FP WNKGRI+CQR QLKRILS EP ++G+E
Sbjct: 770 KSSMTQDLPIAKAAYSFLEDNMPSSFSFPKWNKGRILCQRPQLKRILSSIEPSTDGSERK 829
Query: 182 DIVALSNSPFPP-ERRTSPSNVLRGQHGGVDTETNNRMRTELVTSA 316
I+ LSNS FPP +TS +V G++ V ++ R+RTEL+TSA
Sbjct: 830 KIITLSNSLFPPLGTKTSSKDVNSGRYNDVTSDERLRIRTELLTSA 875
>dbj|GAY38955.1| hypothetical protein CUMW_040670 [Citrus unshiu]
Length = 871
Score = 119 bits (298), Expect = 8e-27
Identities = 58/105 (55%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
++S T D PIAK AY+FL++N SS F FP WNKGRI+CQR QLKRILSGRE S+G++ D
Sbjct: 765 RTSTTEDLPIAKAAYTFLQENASSLFSFPQWNKGRIICQRTQLKRILSGRESSSDGSKKD 824
Query: 182 DIVALSNSPF-PPERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
+I++LSNSPF PP+R+ S + + G ++ET TEL+TS
Sbjct: 825 NIISLSNSPFSPPDRKASTTGLRNGLFDNANSETKMSASTELMTS 869
>ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Citrus sinensis]
Length = 871
Score = 118 bits (296), Expect = 2e-26
Identities = 57/105 (54%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
++S T D P+AK AY+FL++N SS F FP WNKGRI+CQR QLKRILSGRE S+G++ D
Sbjct: 765 RTSTTEDLPVAKAAYTFLQENASSLFNFPQWNKGRIICQRTQLKRILSGRESSSDGSKKD 824
Query: 182 DIVALSNSPF-PPERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
+I++LSNSPF PP+R+ S + + G ++ET TEL+TS
Sbjct: 825 NIISLSNSPFSPPDRKASTTGLRNGLFDNANSETKMSASTELMTS 869
>ref|XP_018831512.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Juglans regia]
Length = 871
Score = 118 bits (295), Expect = 2e-26
Identities = 66/105 (62%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
K+SITRDFP+AK AYSFL+D VS+SF F GWNKGRIVCQR QLKRILS E S+ E D
Sbjct: 767 KNSITRDFPVAKAAYSFLQDKVSTSFSFAGWNKGRIVCQRSQLKRILS--ESSSDAFEKD 824
Query: 182 DIVALSNSPFPPE-RRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
IV L NSPF P R S ++V QH DTET R +TELV S
Sbjct: 825 KIVDLRNSPFNPSGTRPSKNDVKSSQHKDADTETRIRKQTELVPS 869
>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 862
Score = 117 bits (293), Expect = 4e-26
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSS T+D P+AK AYSFL+DN+S +F FP WN GRI+CQR QLK++LS EP ++G+ +
Sbjct: 756 KSSTTQDLPVAKAAYSFLQDNMSGAFNFPKWNNGRILCQRSQLKKLLSSIEPSTDGSSSK 815
Query: 182 DIVALSNSPFPPE-RRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
I LSNSPFPP + SP++V G++ G ++ +R RTEL+TS
Sbjct: 816 SICILSNSPFPPPGTKISPTDVDSGRYNGTSSDATSRTRTELLTS 860
>ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Nelumbo nucifera]
Length = 878
Score = 117 bits (293), Expect = 4e-26
Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSITR+ P+AK AYSFLKDN SSF FPGWNKGRI+C R QLKR LS EP SEG+ D
Sbjct: 772 KSSITRELPVAKAAYSFLKDNALSSFCFPGWNKGRIICHRPQLKRTLSDPEPSSEGSTRD 831
Query: 182 DIVALSNSPFP-PERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
++ +NS FP P R+TS S H D+E + R RTEL+T+
Sbjct: 832 KLINTTNSNFPLPGRKTSRSGSDGNLHVNDDSEMSTRTRTELMTT 876
>ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Pyrus x bretschneideri]
Length = 876
Score = 116 bits (290), Expect = 1e-25
Identities = 58/105 (55%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSI+++ PIA+ AY+FL+DN+ +SF FP WN GRI+CQR QLKRILS EP +EG+E +
Sbjct: 770 KSSISQELPIARAAYTFLQDNMPASFSFPKWNNGRILCQRPQLKRILSSIEPSTEGSERN 829
Query: 182 DIVALSNSPFPPE-RRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
+I LSNSPFPP +TS S V G++ ++ R RTEL+TS
Sbjct: 830 NITTLSNSPFPPPGTKTSSSAVNSGRYNDASSDERTRRRTELLTS 874
>ref|XP_021291970.1| pentatricopeptide repeat-containing protein At1g74850, chloroplastic
[Herrania umbratica]
Length = 860
Score = 115 bits (287), Expect = 2e-25
Identities = 61/103 (59%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KSSI RD P AK AY+FL+D VSSSF FPGWNKGRIVCQR QLKRILS + S+ ++ D
Sbjct: 754 KSSIARDIPTAKAAYTFLQDIVSSSFSFPGWNKGRIVCQRSQLKRILSATDSSSDESKAD 813
Query: 182 DIVALSNSPFPPER-RTSPSNVLRGQHGGVDTETNNRMRTELV 307
+I+ALSN P P ++SP +V QH V +ET R RTEL+
Sbjct: 814 NIIALSNFPIPSMGVKSSPGDVEYTQHDNVISETKMRRRTELM 856
>ref|XP_015883630.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Ziziphus jujuba]
Length = 873
Score = 114 bits (284), Expect = 6e-25
Identities = 60/104 (57%), Positives = 74/104 (71%)
Frame = +2
Query: 2 KSSITRDFPIAKTAYSFLKDNVSSSFVFPGWNKGRIVCQRLQLKRILSGREPPSEGTETD 181
KS IT+D PIAK A+SFL+DNVSSSF FP WNKGRIVC + QLK+ILS E S+G++ D
Sbjct: 769 KSPITQDMPIAKAAFSFLQDNVSSSFSFPEWNKGRIVCPQSQLKQILSSME-SSDGSKKD 827
Query: 182 DIVALSNSPFPPERRTSPSNVLRGQHGGVDTETNNRMRTELVTS 313
I+ LSNSPFP TS S ++ QH VD++ R EL+TS
Sbjct: 828 RIIILSNSPFPLPGTTSTSGLMSSQHNNVDSDAVIGRRAELLTS 871