BLASTX nr result

ID: Acanthopanax24_contig00012772 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00012772
         (564 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853941.1| ESCRT-related protein CHMP1B [Amborella tric...    56   3e-06
emb|CDO97941.1| unnamed protein product [Coffea canephora]             55   5e-06

>ref|XP_006853941.1| ESCRT-related protein CHMP1B [Amborella trichopoda]
 gb|ERN15408.1| hypothetical protein AMTR_s00036p00206680 [Amborella trichopoda]
          Length = 203

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -1

Query: 564 AHAVPLKTTEKVDEDDLSRRLAELKARG 481
           AHAVP KTTEKVDEDDLSRRLAELKARG
Sbjct: 176 AHAVPTKTTEKVDEDDLSRRLAELKARG 203


>emb|CDO97941.1| unnamed protein product [Coffea canephora]
          Length = 203

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -1

Query: 564 AHAVPLKTTEKVDEDDLSRRLAELKARG 481
           AHA+P KTTEKVDEDDLSRRLAELKARG
Sbjct: 176 AHAIPTKTTEKVDEDDLSRRLAELKARG 203


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