BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00012260
         (1173 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010648047.1| PREDICTED: protein CROWDED NUCLEI 1 [Vitis v...   371   e-114
ref|XP_017235144.1| PREDICTED: protein CROWDED NUCLEI 3-like [Da...   369   e-114
gb|APO14219.1| nuclear matrix constituent protein [Daucus carota]     365   e-112
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]   348   e-106
gb|POE95811.1| protein crowded nuclei 1 [Quercus suber]               317   e-100
ref|XP_018823680.1| PREDICTED: protein CROWDED NUCLEI 1-like iso...   321   7e-97
ref|XP_018823678.1| PREDICTED: protein CROWDED NUCLEI 3-like iso...   321   4e-96
ref|XP_018823677.1| PREDICTED: protein CROWDED NUCLEI 3-like iso...   321   4e-96
ref|XP_023924333.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI ...   317   7e-95
emb|CAN74990.1| hypothetical protein VITISV_008657 [Vitis vinifera]   315   3e-94
ref|XP_010660444.1| PREDICTED: protein CROWDED NUCLEI 1 isoform ...   314   2e-93
ref|XP_010660443.1| PREDICTED: protein CROWDED NUCLEI 1 isoform ...   314   2e-93
gb|EOY02172.1| Nuclear matrix constituent protein-related, putat...   311   4e-93
gb|EOY02173.1| Nuclear matrix constituent protein-related, putat...   311   4e-93
ref|XP_007046342.2| PREDICTED: protein CROWDED NUCLEI 2 isoform ...   311   1e-92
ref|XP_007046339.2| PREDICTED: protein CROWDED NUCLEI 2 isoform ...   311   1e-92
gb|EOY02176.1| Nuclear matrix constituent protein-related, putat...   311   1e-92
gb|EOY02175.1| Nuclear matrix constituent protein-related, putat...   311   2e-92
gb|EOY02174.1| Nuclear matrix constituent protein-related, putat...   311   2e-92
gb|EOY02171.1| Nuclear matrix constituent protein-related, putat...   311   2e-92

>ref|XP_010648047.1| PREDICTED: protein CROWDED NUCLEI 1 [Vitis vinifera]
          Length = 1232

 Score =  371 bits (952), Expect = e-114
 Identities = 216/400 (54%), Positives = 267/400 (66%), Gaps = 15/400 (3%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            I++LKEV R+E+EE+K+ER R+EKEKQE+ LNK+QL  HQLEM KDIDELG+LS+KLKDQ
Sbjct: 691  INHLKEVARREIEEMKTERRRIEKEKQEVLLNKRQLEGHQLEMRKDIDELGILSRKLKDQ 750

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRS 378
            REQFIKER R + FVD+ K+C++CGEIT+E++L+D Q  E E E   PLP L DE L+  
Sbjct: 751  REQFIKERDRFLTFVDKHKTCKNCGEITREFVLNDLQLPEMEVEAF-PLPNLADEFLNSP 809

Query: 379  RVDIAGSPGAGT-------DLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQ-------CSE 516
            + ++A S G          DL S  SGG+MS+LRKC +KIFNLSP+K ++         E
Sbjct: 810  QGNMAASDGTNVKISTGEIDLVSSGSGGRMSFLRKCATKIFNLSPSKKSEHVGVQVLREE 869

Query: 517  SPSSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINRE 696
            SP  D+                     GQSI ED  E SFGIAN+S D+ QL SD++ RE
Sbjct: 870  SPLLDLQVNLEKAEGPSIV--------GQSIAEDELEPSFGIANDSFDIQQLHSDSVMRE 921

Query: 697  VNRRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAA 876
            V+          SNM S+ QE PEDSQQSEL+SG R+PGRK + GVHRTRS+K VVEDA 
Sbjct: 922  VDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKSGRRKPGRKRRTGVHRTRSVKNVVEDAK 981

Query: 877  VILGKTSEGPRPKMEVQP-DSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVD 1053
              LG+T E P    + +P DS+Y N+    ++SHAEKAA TI RKRQ   +SR+  SE D
Sbjct: 982  AFLGETPEIPELNGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITESEQD 1041

Query: 1054 ADDSEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            A DSEGRS+SV   GR K   RRQT AP VQT GEKRYNL
Sbjct: 1042 AADSEGRSDSVTAGGRGK---RRQTVAPVVQTPGEKRYNL 1078


>ref|XP_017235144.1| PREDICTED: protein CROWDED NUCLEI 3-like [Daucus carota subsp.
            sativus]
 gb|KZN06383.1| hypothetical protein DCAR_007220 [Daucus carota subsp. sativus]
          Length = 1208

 Score =  369 bits (947), Expect = e-114
 Identities = 223/387 (57%), Positives = 266/387 (68%), Gaps = 2/387 (0%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            I  LKE V+K+MEEL+SER R+EK +QEI LNKKQL EHQLEM+KDI EL +L+KK+K Q
Sbjct: 680  IKSLKEAVQKDMEELRSERSRIEKVEQEIALNKKQLEEHQLEMNKDIVELDLLNKKVKLQ 739

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDF-QSLETENEEISPLPRLGDELLDR 375
            REQ IKER RL+AFVDRLKSC HCGE T+EY LSD  Q LETE  ++SPL R G   + +
Sbjct: 740  REQLIKERDRLLAFVDRLKSCNHCGEFTREYELSDLQQQLETE-YKLSPLSRSGHGRVYK 798

Query: 376  SRVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXXXX 555
             +         GTDL S NSGG +SW+++CTS IF  SPN+ AQ S+S  SDMLA     
Sbjct: 799  VQ--------DGTDLTSSNSGGHISWIKRCTSNIFKYSPNETAQYSKS-QSDMLA--NVD 847

Query: 556  XXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVEYS 735
                        +RG    EDGPE S G+ANES DVH L +   +REV    D+ T E+S
Sbjct: 848  EKDEGPSASDLASRGLRKAEDGPEPSLGLANESSDVH-LVTPKTDREVAEGHDICTDEFS 906

Query: 736  NMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPRPK 915
            N++S T EAPEDSQQSEL+SG RR  RKPK G+HRT S+K VVEDAAVILG+TS G +  
Sbjct: 907  NINSTTAEAPEDSQQSELKSGRRRSSRKPKVGIHRTHSVKAVVEDAAVILGRTSAG-KLG 965

Query: 916  MEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESVL-E 1092
              V  +S+ +N+ SRGDSS+ EKA GT  RKRQ  +TSRV  SEV  D SE  SESV  E
Sbjct: 966  DNVPHESADVNEESRGDSSYGEKALGTTQRKRQRAQTSRVTVSEVAGDYSEECSESVSEE 1025

Query: 1093 VGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            VG   RR+RRQT   SVQT GE+RYNL
Sbjct: 1026 VG---RRKRRQTVVSSVQTPGERRYNL 1049


>gb|APO14219.1| nuclear matrix constituent protein [Daucus carota]
          Length = 1206

 Score =  365 bits (938), Expect = e-112
 Identities = 222/387 (57%), Positives = 265/387 (68%), Gaps = 2/387 (0%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            I  LKE V+K+MEEL+SER R+EK +QEI LNKKQL EHQLEM+KDI EL +L+KK+K Q
Sbjct: 678  IKSLKEAVQKDMEELRSERSRIEKVEQEIALNKKQLEEHQLEMNKDIVELDLLNKKVKLQ 737

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDF-QSLETENEEISPLPRLGDELLDR 375
            REQ IKER RL+AFVDRLKSC HCGE T+EY LSD  Q LETE  ++SPL R G   + +
Sbjct: 738  REQLIKERDRLLAFVDRLKSCNHCGEFTREYELSDLQQQLETE-YKLSPLSRSGHGRVYK 796

Query: 376  SRVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXXXX 555
             +         GTDL S NSGG +SW+++CTS IF  SPN+ AQ S+S  SDMLA     
Sbjct: 797  VQ--------DGTDLTSSNSGGHISWIKRCTSNIFKYSPNETAQYSKS-QSDMLA--NVD 845

Query: 556  XXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVEYS 735
                        +RG    EDGPE S G+ANES DVH +T    +REV    D+ T E+S
Sbjct: 846  EKDEGPSACDLASRGLRKAEDGPEPSLGLANESSDVHLVTL-KTDREVAEGHDICTDEFS 904

Query: 736  NMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPRPK 915
            N++S T EAPEDSQQSEL+SG RR  RKPK G+HRT S+K VV DAAVILG+TS G +  
Sbjct: 905  NINSTTAEAPEDSQQSELKSGRRRSSRKPKVGIHRTHSVKAVVGDAAVILGRTSAG-KLG 963

Query: 916  MEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESVL-E 1092
              V  +S+ +N+ SRGDSS+ EKA GT  RKRQ  +TSRV  SEV  D SE  SESV  E
Sbjct: 964  DNVPHESADVNEESRGDSSYGEKALGTTQRKRQRAQTSRVTVSEVAGDYSEECSESVSEE 1023

Query: 1093 VGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            VG   RR+RRQT   SVQT GE+RYNL
Sbjct: 1024 VG---RRKRRQTVVSSVQTPGERRYNL 1047


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score =  348 bits (894), Expect = e-106
 Identities = 208/399 (52%), Positives = 257/399 (64%), Gaps = 14/399 (3%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            I++LKEV R+E+EE+K+ER R+EKEKQE+ LNK+QL  HQLEM KDIDELG+LS+KLKDQ
Sbjct: 709  INHLKEVARREIEEMKTERRRIEKEKQEVLLNKRQLEGHQLEMRKDIDELGILSRKLKDQ 768

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRS 378
            REQFIKER R + FVD+ K+C++CGEIT+E++L+D Q  E E E   PLP L DE L+  
Sbjct: 769  REQFIKERDRFLTFVDKHKTCKNCGEITREFVLNDLQLPEMEVEAF-PLPNLADEFLNSP 827

Query: 379  RVDIAGSPGAGT-------DLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQ-------CSE 516
            + ++A S G          DL S  SGG+MS+LRKC +KIFNLSP+K ++         E
Sbjct: 828  QGNMAASDGTNVKIXTGEIDLVSSGSGGRMSFLRKCATKIFNLSPSKKSEHVGVQVLREE 887

Query: 517  SPSSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINRE 696
            SP  D+                     GQSI ED  E SFGIAN+S D+ QL SD++ RE
Sbjct: 888  SPLLDLQVNLEKAEGPSIV--------GQSIAEDELEPSFGIANDSFDIQQLHSDSVMRE 939

Query: 697  VNRRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAA 876
            V+          SNM S+ QE PEDSQQSEL+SG R+PGRK + GVHRTRS+K V+    
Sbjct: 940  VDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKSGRRKPGRKRRTGVHRTRSVKNVLNG-- 997

Query: 877  VILGKTSEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDA 1056
                   E P        DS+Y N+    ++SHAEKAA TI RKRQ   +SR+  SE DA
Sbjct: 998  ------DERPN-------DSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITESEQDA 1044

Query: 1057 DDSEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
             DSEGRS+SV   GR K   RRQT AP VQT GEKRYNL
Sbjct: 1045 ADSEGRSDSVTAGGRGK---RRQTVAPVVQTPGEKRYNL 1080


>gb|POE95811.1| protein crowded nuclei 1 [Quercus suber]
          Length = 542

 Score =  317 bits (813), Expect = e-100
 Identities = 193/395 (48%), Positives = 249/395 (63%), Gaps = 10/395 (2%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            I +L EV  ++ +E+KSER R++KEK+E  LN+KQL  +QLEM+KDI EL  L+ KLK Q
Sbjct: 23   IKHLNEVAERQWQEVKSERLRLQKEKEEFKLNQKQLEVNQLEMNKDIVELNSLNSKLKKQ 82

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETE--NEEISPLPRLGDELLD 372
            REQFI+ER+R +AFV++ K CE CGEIT+E + SD Q  E E  + E+ P+PRL DE L+
Sbjct: 83   REQFIEERNRFLAFVEKFKGCESCGEITRELVFSDLQLPENEIKHREVIPVPRLADEFLN 142

Query: 373  RSRVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQ-------CSESPSSD 531
              + + A S     DL   +SGG M+WLRKCTSKIFNLSP K  +          SPSS 
Sbjct: 143  SPQGNAAAS-----DLGYSDSGGHMTWLRKCTSKIFNLSPGKKIENVSAPILTESSPSSA 197

Query: 532  MLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDV-HQLTSDNINREVNRR 708
            ML                  A G  I ED P  SFG+ N++ DV  QL S++I REV+  
Sbjct: 198  MLV--------------NKGASGHGISEDEPR-SFGMTNDTYDVQRQLQSESIIREVDNA 242

Query: 709  QDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILG 888
                  ++S MDS+ QE PEDS QSEL+SG R+P R+ K+GV+RTRS+K VV+DA V L 
Sbjct: 243  CAPSVDDHSYMDSKVQEVPEDSLQSELKSGRRKPARQRKSGVYRTRSVKDVVQDAKVFLE 302

Query: 889  KTSEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSE 1068
            ++      + E      +IN+ S+GDSS AEK+AG   RKRQH +TSR+  SE D  +SE
Sbjct: 303  RSELNANSQTEA---IDHINEESKGDSSRAEKSAGNNARKRQHAQTSRITESEQDDGNSE 359

Query: 1069 GRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
              SESV   G   RR+RRQT    +QT GEKRYNL
Sbjct: 360  EHSESVTAGG---RRKRRQTATSVMQTPGEKRYNL 391


>ref|XP_018823680.1| PREDICTED: protein CROWDED NUCLEI 1-like isoform X3 [Juglans regia]
          Length = 1068

 Score =  321 bits (822), Expect = 7e-97
 Identities = 189/397 (47%), Positives = 252/397 (63%), Gaps = 7/397 (1%)
 Frame = +1

Query: 4    RKKIVISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSK 183
            R++  I +L EV  K+ EE+KSER R++KE +E+ +N+KQL  +QLEM KDIDELG LS+
Sbjct: 677  RERNSIRHLNEVAEKQWEEVKSERHRIQKETEELKMNQKQLEVNQLEMRKDIDELGDLSR 736

Query: 184  KLKDQREQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDE 363
            KLK QREQFI+ERS  +AFV++LKSC+ CGEIT+E++ SD Q  + E+ E+  LPRLGDE
Sbjct: 737  KLKMQREQFIEERSLFLAFVEKLKSCKICGEITREFVFSDLQVPDMEDREVISLPRLGDE 796

Query: 364  LLDRSRVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQ-------CSESP 522
            +L  S+ ++     A TDL   +SGG +SW+RKCTSKIF +SP K ++          SP
Sbjct: 797  ILKSSQGNV-----AATDLGFSDSGGHLSWIRKCTSKIFKISPGKKSEHVAAPVLTESSP 851

Query: 523  SSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVN 702
            SS +L                  A+G +I +D P+ S G+A  + DV +L SD+I  EV+
Sbjct: 852  SSPIL---LNVENKREPAMLGKGAKGYAISKDEPQPSLGMAANTYDVQRLQSDSIIGEVD 908

Query: 703  RRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVI 882
                    ++S+MDS+ ++ P+DS QSELR   R+PG K K+GVHRTRS+K VVEDA V 
Sbjct: 909  NVSAPSADDHSHMDSKVEKVPDDSLQSELRVVRRKPGGKRKSGVHRTRSVKAVVEDAKVF 968

Query: 883  LGKTSEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADD 1062
            L +T E  R         ++ ++ SRGDSSH E       RKRQH +TSR+  SE D  +
Sbjct: 969  LKETPEKTR--------QNHTDEESRGDSSHTETVVSKNARKRQHAQTSRITESEQDVGN 1020

Query: 1063 SEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            SE  SESV   G   RR+RRQT    VQT  EKRYNL
Sbjct: 1021 SEEHSESVTAGG---RRKRRQTAVSIVQTPVEKRYNL 1054


>ref|XP_018823678.1| PREDICTED: protein CROWDED NUCLEI 3-like isoform X2 [Juglans regia]
          Length = 1197

 Score =  321 bits (822), Expect = 4e-96
 Identities = 189/397 (47%), Positives = 252/397 (63%), Gaps = 7/397 (1%)
 Frame = +1

Query: 4    RKKIVISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSK 183
            R++  I +L EV  K+ EE+KSER R++KE +E+ +N+KQL  +QLEM KDIDELG LS+
Sbjct: 676  RERNSIRHLNEVAEKQWEEVKSERHRIQKETEELKMNQKQLEVNQLEMRKDIDELGDLSR 735

Query: 184  KLKDQREQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDE 363
            KLK QREQFI+ERS  +AFV++LKSC+ CGEIT+E++ SD Q  + E+ E+  LPRLGDE
Sbjct: 736  KLKMQREQFIEERSLFLAFVEKLKSCKICGEITREFVFSDLQVPDMEDREVISLPRLGDE 795

Query: 364  LLDRSRVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQ-------CSESP 522
            +L  S+ ++     A TDL   +SGG +SW+RKCTSKIF +SP K ++          SP
Sbjct: 796  ILKSSQGNV-----AATDLGFSDSGGHLSWIRKCTSKIFKISPGKKSEHVAAPVLTESSP 850

Query: 523  SSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVN 702
            SS +L                  A+G +I +D P+ S G+A  + DV +L SD+I  EV+
Sbjct: 851  SSPIL---LNVENKREPAMLGKGAKGYAISKDEPQPSLGMAANTYDVQRLQSDSIIGEVD 907

Query: 703  RRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVI 882
                    ++S+MDS+ ++ P+DS QSELR   R+PG K K+GVHRTRS+K VVEDA V 
Sbjct: 908  NVSAPSADDHSHMDSKVEKVPDDSLQSELRVVRRKPGGKRKSGVHRTRSVKAVVEDAKVF 967

Query: 883  LGKTSEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADD 1062
            L +T E  R         ++ ++ SRGDSSH E       RKRQH +TSR+  SE D  +
Sbjct: 968  LKETPEKTR--------QNHTDEESRGDSSHTETVVSKNARKRQHAQTSRITESEQDVGN 1019

Query: 1063 SEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            SE  SESV   G   RR+RRQT    VQT  EKRYNL
Sbjct: 1020 SEEHSESVTAGG---RRKRRQTAVSIVQTPVEKRYNL 1053


>ref|XP_018823677.1| PREDICTED: protein CROWDED NUCLEI 3-like isoform X1 [Juglans regia]
          Length = 1198

 Score =  321 bits (822), Expect = 4e-96
 Identities = 189/397 (47%), Positives = 252/397 (63%), Gaps = 7/397 (1%)
 Frame = +1

Query: 4    RKKIVISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSK 183
            R++  I +L EV  K+ EE+KSER R++KE +E+ +N+KQL  +QLEM KDIDELG LS+
Sbjct: 677  RERNSIRHLNEVAEKQWEEVKSERHRIQKETEELKMNQKQLEVNQLEMRKDIDELGDLSR 736

Query: 184  KLKDQREQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDE 363
            KLK QREQFI+ERS  +AFV++LKSC+ CGEIT+E++ SD Q  + E+ E+  LPRLGDE
Sbjct: 737  KLKMQREQFIEERSLFLAFVEKLKSCKICGEITREFVFSDLQVPDMEDREVISLPRLGDE 796

Query: 364  LLDRSRVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQ-------CSESP 522
            +L  S+ ++     A TDL   +SGG +SW+RKCTSKIF +SP K ++          SP
Sbjct: 797  ILKSSQGNV-----AATDLGFSDSGGHLSWIRKCTSKIFKISPGKKSEHVAAPVLTESSP 851

Query: 523  SSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVN 702
            SS +L                  A+G +I +D P+ S G+A  + DV +L SD+I  EV+
Sbjct: 852  SSPIL---LNVENKREPAMLGKGAKGYAISKDEPQPSLGMAANTYDVQRLQSDSIIGEVD 908

Query: 703  RRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVI 882
                    ++S+MDS+ ++ P+DS QSELR   R+PG K K+GVHRTRS+K VVEDA V 
Sbjct: 909  NVSAPSADDHSHMDSKVEKVPDDSLQSELRVVRRKPGGKRKSGVHRTRSVKAVVEDAKVF 968

Query: 883  LGKTSEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADD 1062
            L +T E  R         ++ ++ SRGDSSH E       RKRQH +TSR+  SE D  +
Sbjct: 969  LKETPEKTR--------QNHTDEESRGDSSHTETVVSKNARKRQHAQTSRITESEQDVGN 1020

Query: 1063 SEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            SE  SESV   G   RR+RRQT    VQT  EKRYNL
Sbjct: 1021 SEEHSESVTAGG---RRKRRQTAVSIVQTPVEKRYNL 1054


>ref|XP_023924333.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI 3-like [Quercus suber]
          Length = 1200

 Score =  317 bits (813), Expect = 7e-95
 Identities = 193/395 (48%), Positives = 249/395 (63%), Gaps = 10/395 (2%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            I +L EV  ++ +E+KSER R++KEK+E  LN+KQL  +QLEM+KDI EL  L+ KLK Q
Sbjct: 681  IKHLNEVAERQWQEVKSERLRLQKEKEEFKLNQKQLEVNQLEMNKDIVELNSLNSKLKKQ 740

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETE--NEEISPLPRLGDELLD 372
            REQFI+ER+R +AFV++ K CE CGEIT+E + SD Q  E E  + E+ P+PRL DE L+
Sbjct: 741  REQFIEERNRFLAFVEKFKGCESCGEITRELVFSDLQLPENEIKHREVIPVPRLADEFLN 800

Query: 373  RSRVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNKIAQ-------CSESPSSD 531
              + + A S     DL   +SGG M+WLRKCTSKIFNLSP K  +          SPSS 
Sbjct: 801  SPQGNAAAS-----DLGYSDSGGHMTWLRKCTSKIFNLSPGKKIENVSAPILTESSPSSA 855

Query: 532  MLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDV-HQLTSDNINREVNRR 708
            ML                  A G  I ED P  SFG+ N++ DV  QL S++I REV+  
Sbjct: 856  MLV--------------NKGASGHGISEDEPR-SFGMTNDTYDVQRQLQSESIIREVDNA 900

Query: 709  QDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILG 888
                  ++S MDS+ QE PEDS QSEL+SG R+P R+ K+GV+RTRS+K VV+DA V L 
Sbjct: 901  CAPSVDDHSYMDSKVQEVPEDSLQSELKSGRRKPARQRKSGVYRTRSVKDVVQDAKVFLE 960

Query: 889  KTSEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSE 1068
            ++      + E      +IN+ S+GDSS AEK+AG   RKRQH +TSR+  SE D  +SE
Sbjct: 961  RSELNANSQTEA---IDHINEESKGDSSRAEKSAGNNARKRQHAQTSRITESEQDDGNSE 1017

Query: 1069 GRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
              SESV   G   RR+RRQT    +QT GEKRYNL
Sbjct: 1018 EHSESVTAGG---RRKRRQTATSVMQTPGEKRYNL 1049


>emb|CAN74990.1| hypothetical protein VITISV_008657 [Vitis vinifera]
          Length = 1140

 Score =  315 bits (807), Expect = 3e-94
 Identities = 192/404 (47%), Positives = 250/404 (61%), Gaps = 19/404 (4%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            ++YL+EV R+EMEE+K ER R+EKEKQE+  NKK L EHQ EM KDIDEL  LS+KLKDQ
Sbjct: 649  VNYLREVARQEMEEVKLERLRIEKEKQEVAANKKHLDEHQFEMRKDIDELVSLSRKLKDQ 708

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSL-ETENEEISPLPRLGDELLDR 375
            RE F KER R +AFV++ KSC++CGEIT E++LSD Q L E EN E+ PLPRL D     
Sbjct: 709  RELFSKERERFIAFVEQQKSCKNCGEITCEFVLSDLQPLPEIENVEVPPLPRLADRYFKG 768

Query: 376  S---------RVDIAGSPGAGTDLRSLNSGGKMSWLRKCTSKIFNLSPNK------IAQC 510
            S         R +I  +PG      S  SGG +S+LRKCTSKIFNLSP K      I   
Sbjct: 769  SVQGNMAASERQNIEMTPGI-VGSGSPTSGGTISFLRKCTSKIFNLSPGKKIEVAAIQNL 827

Query: 511  SESPSSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNIN 690
            +E+P     A                 ++     ED PE SF IAN+S DV ++ SDN  
Sbjct: 828  TEAPEPSRQA-------------IVEPSKRLGSTEDEPEPSFRIANDSFDVQRIQSDNSI 874

Query: 691  REVNRRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVED 870
            +EV   QD L+++ SN+DS+  E  + SQ S+L+   R+PG++ K  +HRTRS+K VV D
Sbjct: 875  KEVEAGQD-LSIDESNIDSKALELQQHSQHSDLKGARRKPGKRSKQRIHRTRSVKAVVRD 933

Query: 871  AAVILGKT---SEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRG 1041
            A  ILG++   SE   P    + DS+++N  SRG+SS A+K      RKRQ   TS+   
Sbjct: 934  AKAILGESLELSENEHPNGNPE-DSAHMNDESRGESSFADKGTPRNGRKRQRAYTSQTMV 992

Query: 1042 SEVDADDSEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            SE D DDSEGRS+SV+     ++ +RRQ   P+VQT G++RYNL
Sbjct: 993  SEQDGDDSEGRSDSVM---ARRQGKRRQKVPPAVQTLGQERYNL 1033


>ref|XP_010660444.1| PREDICTED: protein CROWDED NUCLEI 1 isoform X2 [Vitis vinifera]
          Length = 1235

 Score =  314 bits (804), Expect = 2e-93
 Identities = 190/403 (47%), Positives = 251/403 (62%), Gaps = 18/403 (4%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            ++YL+EV R+EMEE+K ER R+EKEKQE+  NKK L EHQ EM KDIDEL  LS+KLKDQ
Sbjct: 677  VNYLREVARQEMEEVKLERLRIEKEKQEVAANKKHLDEHQFEMRKDIDELVSLSRKLKDQ 736

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSL-ETENEEISPLPRLGDELLDR 375
            RE F KER R +AFV++ KSC++CGEIT E++LSD Q L E EN E+ PLPRL D     
Sbjct: 737  RELFSKERERFIAFVEQQKSCKNCGEITCEFVLSDLQPLPEIENVEVPPLPRLADRYFKG 796

Query: 376  S-RVDIAGSPGAGTDLR-------SLNSGGKMSWLRKCTSKIFNLSPNK------IAQCS 513
            S + ++A S     ++        S  SGG +S+LRKCTSKIFNLSP K      I   +
Sbjct: 797  SVQGNMAASERQNNEMTPGIVGSGSPTSGGTISFLRKCTSKIFNLSPGKKIEVAAIQNLT 856

Query: 514  ESPSSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINR 693
            E+P     A                 ++     ED PE SF IAN+S DV ++ SDN  +
Sbjct: 857  EAPEPSRQA-------------IVEPSKRLGSTEDEPEPSFRIANDSFDVQRIQSDNSIK 903

Query: 694  EVNRRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDA 873
            EV   QD L+++ SN+DS+  E  + SQ S+L+   R+PG++ K  +HRTRS+K VV DA
Sbjct: 904  EVEAGQD-LSIDESNIDSKALELQQHSQHSDLKGARRKPGKRSKQRIHRTRSVKAVVRDA 962

Query: 874  AVILGKT---SEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGS 1044
              ILG++   SE   P    + DS+++N  SRG+SS A+K      RKRQ   TS+   S
Sbjct: 963  KAILGESLELSENEHPNGNPE-DSAHMNDESRGESSFADKGTPRNGRKRQRAYTSQTMVS 1021

Query: 1045 EVDADDSEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            E D DDSEGRS+SV+     ++ +RRQ   P+VQT G++RYNL
Sbjct: 1022 EQDGDDSEGRSDSVM---ARRQGKRRQKVPPAVQTLGQERYNL 1061


>ref|XP_010660443.1| PREDICTED: protein CROWDED NUCLEI 1 isoform X1 [Vitis vinifera]
          Length = 1238

 Score =  314 bits (804), Expect = 2e-93
 Identities = 190/403 (47%), Positives = 251/403 (62%), Gaps = 18/403 (4%)
 Frame = +1

Query: 19   ISYLKEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQ 198
            ++YL+EV R+EMEE+K ER R+EKEKQE+  NKK L EHQ EM KDIDEL  LS+KLKDQ
Sbjct: 677  VNYLREVARQEMEEVKLERLRIEKEKQEVAANKKHLDEHQFEMRKDIDELVSLSRKLKDQ 736

Query: 199  REQFIKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSL-ETENEEISPLPRLGDELLDR 375
            RE F KER R +AFV++ KSC++CGEIT E++LSD Q L E EN E+ PLPRL D     
Sbjct: 737  RELFSKERERFIAFVEQQKSCKNCGEITCEFVLSDLQPLPEIENVEVPPLPRLADRYFKG 796

Query: 376  S-RVDIAGSPGAGTDLR-------SLNSGGKMSWLRKCTSKIFNLSPNK------IAQCS 513
            S + ++A S     ++        S  SGG +S+LRKCTSKIFNLSP K      I   +
Sbjct: 797  SVQGNMAASERQNNEMTPGIVGSGSPTSGGTISFLRKCTSKIFNLSPGKKIEVAAIQNLT 856

Query: 514  ESPSSDMLAXXXXXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINR 693
            E+P     A                 ++     ED PE SF IAN+S DV ++ SDN  +
Sbjct: 857  EAPEPSRQA-------------IVEPSKRLGSTEDEPEPSFRIANDSFDVQRIQSDNSIK 903

Query: 694  EVNRRQDLLTVEYSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDA 873
            EV   QD L+++ SN+DS+  E  + SQ S+L+   R+PG++ K  +HRTRS+K VV DA
Sbjct: 904  EVEAGQD-LSIDESNIDSKALELQQHSQHSDLKGARRKPGKRSKQRIHRTRSVKAVVRDA 962

Query: 874  AVILGKT---SEGPRPKMEVQPDSSYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGS 1044
              ILG++   SE   P    + DS+++N  SRG+SS A+K      RKRQ   TS+   S
Sbjct: 963  KAILGESLELSENEHPNGNPE-DSAHMNDESRGESSFADKGTPRNGRKRQRAYTSQTMVS 1021

Query: 1045 EVDADDSEGRSESVLEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
            E D DDSEGRS+SV+     ++ +RRQ   P+VQT G++RYNL
Sbjct: 1022 EQDGDDSEGRSDSVM---ARRQGKRRQKVPPAVQTLGQERYNL 1061


>gb|EOY02172.1| Nuclear matrix constituent protein-related, putative isoform 2
            [Theobroma cacao]
          Length = 1079

 Score =  311 bits (796), Expect = 4e-93
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 700  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 759

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 760  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 818

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 819  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 873

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 874  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 920

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 921  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 980

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 981  PSESVQPDDISHANEVSAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1040

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1041 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1066


>gb|EOY02173.1| Nuclear matrix constituent protein-related, putative isoform 3
            [Theobroma cacao]
          Length = 1080

 Score =  311 bits (796), Expect = 4e-93
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 700  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 759

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 760  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 818

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 819  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 873

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 874  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 920

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 921  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 980

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 981  PSESVQPDDISHANEVSAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1040

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1041 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1066


>ref|XP_007046342.2| PREDICTED: protein CROWDED NUCLEI 2 isoform X2 [Theobroma cacao]
          Length = 1195

 Score =  311 bits (797), Expect = 1e-92
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 700  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 759

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 760  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 818

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 819  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 873

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 874  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 920

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 921  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 980

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 981  PSESVQPDDISHANEESAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1040

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1041 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1066


>ref|XP_007046339.2| PREDICTED: protein CROWDED NUCLEI 2 isoform X1 [Theobroma cacao]
          Length = 1198

 Score =  311 bits (797), Expect = 1e-92
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 700  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 759

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 760  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 818

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 819  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 873

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 874  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 920

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 921  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 980

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 981  PSESVQPDDISHANEESAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1040

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1041 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1066


>gb|EOY02176.1| Nuclear matrix constituent protein-related, putative isoform 6
            [Theobroma cacao]
          Length = 1179

 Score =  311 bits (796), Expect = 1e-92
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 681  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 740

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 741  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 799

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 800  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 854

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 855  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 901

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 902  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 961

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 962  PSESVQPDDISHANEVSAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1021

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1022 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1047


>gb|EOY02175.1| Nuclear matrix constituent protein-related, putative isoform 5
            [Theobroma cacao]
          Length = 1188

 Score =  311 bits (796), Expect = 2e-92
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 690  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 749

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 750  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 808

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 809  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 863

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 864  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 910

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 911  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 970

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 971  PSESVQPDDISHANEVSAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1030

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1031 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1056


>gb|EOY02174.1| Nuclear matrix constituent protein-related, putative isoform 4
            [Theobroma cacao]
          Length = 1195

 Score =  311 bits (796), Expect = 2e-92
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 700  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 759

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 760  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 818

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 819  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 873

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 874  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 920

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 921  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 980

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 981  PSESVQPDDISHANEVSAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1040

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1041 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1066


>gb|EOY02171.1| Nuclear matrix constituent protein-related, putative isoform 1
            [Theobroma cacao]
          Length = 1198

 Score =  311 bits (796), Expect = 2e-92
 Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
 Frame = +1

Query: 31   KEVVRKEMEELKSERCRMEKEKQEITLNKKQLHEHQLEMHKDIDELGVLSKKLKDQREQF 210
            KE V +EMEE++S R  +E+EKQE+ +N+ +L+E Q EM KDIDELG+LS +LKDQRE F
Sbjct: 700  KEDVEREMEEIRSARLAVEREKQEVAINRDKLNEQQQEMRKDIDELGILSSRLKDQREHF 759

Query: 211  IKERSRLVAFVDRLKSCEHCGEITQEYLLSDFQSLETENEEISPLPRLGDELLDRSRVDI 390
            I+ER   + FV++LKSC+ CGEIT++++LS+FQ  + E+ EI PLPRL DEL+ R+    
Sbjct: 760  IRERHSFLEFVEKLKSCKTCGEITRDFVLSNFQLPDVEDREIVPLPRLADELI-RNHQGY 818

Query: 391  AGSPGAGTDLRS-------LNSGGKMSWLRKCTSKIFNLSPNKIAQCSESPSSDMLAXXX 549
             G+ G     RS         S G+MSWLRKCT+KIF++SP K  +       ++     
Sbjct: 819  LGASGVKNIKRSPEAYSQYPESAGRMSWLRKCTTKIFSISPTKRNESKAEGPGEL----- 873

Query: 550  XXXXXXXXXXXXXXARGQSIDEDGPEASFGIANESCDVHQLTSDNINREVNRRQDLLTVE 729
                            G +I E   E S  I  +S +   L SD I +  +R     +++
Sbjct: 874  -----------TNKEAGGNIHEKAGEPSLRIPGDSINNQLLQSDKIGKVDDRSGP--SLD 920

Query: 730  YSNMDSQTQEAPEDSQQSELRSGHRRPGRKPKAGVHRTRSMKVVVEDAAVILGKTSEGPR 909
            +S  DS+ QE PEDSQQSE +SG R+PGRKPK+G++RTRS+K VVEDA + LG++ E P 
Sbjct: 921  HSYTDSKVQEVPEDSQQSERKSGRRKPGRKPKSGLNRTRSVKAVVEDAKLFLGESPEEPE 980

Query: 910  PKMEVQPDS-SYINKGSRGDSSHAEKAAGTIPRKRQHGETSRVRGSEVDADDSEGRSESV 1086
            P   VQPD  S+ N+ S G S+H+E  A    RKR+  + S++  +E+DA DSEGRS+SV
Sbjct: 981  PSESVQPDDISHANEVSAGVSTHSENRARNNARKRRRPQDSKITDTELDAADSEGRSDSV 1040

Query: 1087 LEVGREKRRQRRQTEAPSVQTRGEKRYNL 1173
               G   +R+R+QT A  +QT GEKRYNL
Sbjct: 1041 TTGG---QRKRQQTAAQGLQTPGEKRYNL 1066