BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00010684
         (857 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN11781.1| RNA binding protein (contains RRM repeats) [Handr...    58   4e-08
gb|KZN06830.1| hypothetical protein DCAR_007667 [Daucus carota s...    56   9e-07

>gb|PIN11781.1| RNA binding protein (contains RRM repeats) [Handroanthus
           impetiginosus]
          Length = 316

 Score = 57.8 bits (138), Expect(2) = 4e-08
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = +2

Query: 17  IFKKPIWEKEGFWPPSCCPWCKWSSTTYDLPVAGRGCTLFSM 142
           IFK+ + EKEGF  PS CP C+WSS   DLPVAGRGC L  M
Sbjct: 251 IFKESVREKEGFDLPSRCPRCEWSSAFNDLPVAGRGCILLLM 292



 Score = 28.9 bits (63), Expect(2) = 4e-08
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 171 RMHHAAVACIH 203
           RMHHAAVACIH
Sbjct: 299 RMHHAAVACIH 309


>gb|KZN06830.1| hypothetical protein DCAR_007667 [Daucus carota subsp. sativus]
          Length = 84

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 36/63 (57%), Positives = 38/63 (60%)
 Frame = -3

Query: 204 NGCMQQLHDASYEVVVCIGQSIENRVHPLPATGRS*VVEXXXXXXXXXXXQNPSFSQMGF 25
           N CM        +VVVCI  SIENRVHPLPATGRS VVE           QN SFSQMG 
Sbjct: 5   NSCMMH----PIKVVVCIDHSIENRVHPLPATGRSRVVE-LHSGLGPQSGQNLSFSQMGS 59

Query: 24  LNI 16
           LN+
Sbjct: 60  LNM 62