BLASTX nr result

ID: Acanthopanax24_contig00010520 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00010520
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017216663.1| PREDICTED: protein AUXIN-REGULATED GENE INVO...    60   6e-09
gb|KZM85090.1| hypothetical protein DCAR_027488 [Daucus carota s...    57   7e-08
ref|XP_021663054.1| protein AUXIN-REGULATED GENE INVOLVED IN ORG...    55   9e-07

>ref|XP_017216663.1| PREDICTED: protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE-like
           [Daucus carota subsp. sativus]
          Length = 120

 Score = 60.5 bits (145), Expect = 6e-09
 Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
 Frame = +3

Query: 177 MMNVRTMKNNPPPFPRK--GTHTTTNNTFVERQKMDYQRSFSQGHGRRMFSSKSYFSLE 347
           MM+VRT+ NN   F R   G +     TFV+R+K+++QRSFSQG  R++ SSKSYF+L+
Sbjct: 1   MMDVRTLHNNASSFSRNDNGGYHRNGTTFVQRRKIEHQRSFSQGLDRKLLSSKSYFTLQ 59


>gb|KZM85090.1| hypothetical protein DCAR_027488 [Daucus carota subsp. sativus]
          Length = 112

 Score = 57.4 bits (137), Expect = 7e-08
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +3

Query: 180 MNVRTMKNNPPPFPRKGTHTTTNNTFVERQKMDYQRSFSQGHGRRMFSSKSYFSLE 347
           M++RT+K N PPF   G   T   ++ E +KM+YQRSFSQGH R+M   KSYF+L+
Sbjct: 1   MDIRTLKTNSPPFRTNGHELT--RSYNEMRKMEYQRSFSQGHDRKM---KSYFTLQ 51


>ref|XP_021663054.1| protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE-like [Hevea
           brasiliensis]
          Length = 134

 Score = 55.1 bits (131), Expect = 9e-07
 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
 Frame = +3

Query: 141 LINLQDGYSSRIM------MNVRTMKNNPPPFPRKGTHTTTNNTFVERQKMDYQRSFSQG 302
           +INLQD Y S+IM      MNV T    PPP  R           VE++KM+YQRS SQG
Sbjct: 16  IINLQDHYPSKIMDGRARKMNVTTP--TPPPPLR-----------VEKKKMEYQRSMSQG 62

Query: 303 HGRRMFSSKSYFSLE 347
            GRR+F + SYFSLE
Sbjct: 63  SGRRLFPA-SYFSLE 76


Top