BLASTX nr result
ID: Acanthopanax24_contig00010008
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00010008
(480 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007013105.2| PREDICTED: DNA-directed RNA polymerases II a... 113 5e-29
gb|ACF80672.1| unknown [Zea mays] 112 6e-29
gb|OAY64866.1| DNA-directed RNA polymerases II and IV subunit 5A... 110 6e-29
ref|XP_015571646.1| PREDICTED: DNA-directed RNA polymerases II a... 114 7e-29
gb|EEF48219.1| DNA-directed RNA polymerase II, putative [Ricinus... 114 1e-28
gb|EOY30724.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 113 1e-28
ref|XP_022037585.1| DNA-directed RNA polymerases II and IV subun... 114 1e-28
ref|XP_021313015.1| DNA-directed RNA polymerases II and IV subun... 113 2e-28
gb|ESR64457.1| hypothetical protein CICLE_v10009504mg [Citrus cl... 111 2e-28
gb|PNT32001.1| hypothetical protein POPTR_006G161600v3 [Populus ... 113 3e-28
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a... 113 3e-28
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 113 3e-28
ref|XP_007013104.1| PREDICTED: DNA-directed RNA polymerases II a... 113 3e-28
gb|PPD68418.1| hypothetical protein GOBAR_DD34699 [Gossypium bar... 110 3e-28
gb|KQK10218.1| hypothetical protein BRADI_2g52777v3 [Brachypodiu... 111 3e-28
ref|XP_024187492.1| DNA-directed RNA polymerases II and IV subun... 112 4e-28
ref|XP_024028624.1| DNA-directed RNA polymerases II and IV subun... 112 4e-28
gb|POO00886.1| DNA-directed RNA polymerase RPB5 subunit, eukaryo... 112 4e-28
gb|PON62276.1| DNA-directed RNA polymerase RPB5 subunit, eukaryo... 112 4e-28
ref|XP_022991826.1| DNA-directed RNA polymerases II and IV subun... 112 4e-28
>ref|XP_007013105.2| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
isoform X2 [Theobroma cacao]
Length = 146
Score = 113 bits (282), Expect = 5e-29
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLL+RYTVKETQLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 89 NEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 146
>gb|ACF80672.1| unknown [Zea mays]
Length = 127
Score = 112 bits (280), Expect = 6e-29
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYT+KETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 70 NEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 127
>gb|OAY64866.1| DNA-directed RNA polymerases II and IV subunit 5A, partial [Ananas
comosus]
Length = 79
Score = 110 bits (276), Expect = 6e-29
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = +3
Query: 6 EEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
EEKKTLLERYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 23 EEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 79
>ref|XP_015571646.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Ricinus communis]
Length = 205
Score = 114 bits (286), Expect = 7e-29
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 148 NEEKKTLLERYTVKETQLPRIQISDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 205
>gb|EEF48219.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
Length = 225
Score = 114 bits (286), Expect = 1e-28
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 168 NEEKKTLLERYTVKETQLPRIQISDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 225
>gb|EOY30724.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 2,
partial [Theobroma cacao]
Length = 181
Score = 113 bits (282), Expect = 1e-28
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLL+RYTVKETQLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 124 NEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 181
>ref|XP_022037585.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Helianthus
annuus]
gb|OTG24638.1| putative eukaryotic rpb5 RNA polymerase subunit family protein
[Helianthus annuus]
Length = 208
Score = 114 bits (284), Expect = 1e-28
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ+SDP+ARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 151 NEEKKTLLERYTVKETQLPRIQVSDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 208
>ref|XP_021313015.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Sorghum
bicolor]
gb|KXG33574.1| hypothetical protein SORBI_3003G328700 [Sorghum bicolor]
Length = 210
Score = 113 bits (283), Expect = 2e-28
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYT+KETQLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 153 NEEKKTLLERYTLKETQLPRIQISDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
>gb|ESR64457.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
Length = 146
Score = 111 bits (278), Expect = 2e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLL+RYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 89 NEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 146
>gb|PNT32001.1| hypothetical protein POPTR_006G161600v3 [Populus trichocarpa]
Length = 205
Score = 113 bits (282), Expect = 3e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 148 NEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 205
>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 113 bits (282), Expect = 3e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 149 NEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gb|PNT32002.1| hypothetical protein POPTR_006G161600v3 [Populus trichocarpa]
Length = 206
Score = 113 bits (282), Expect = 3e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 149 NEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206
>ref|XP_007013104.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
isoform X1 [Theobroma cacao]
ref|XP_021276750.1| DNA-directed RNA polymerases II and IV subunit 5A [Herrania
umbratica]
ref|XP_021276751.1| DNA-directed RNA polymerases II and IV subunit 5A [Herrania
umbratica]
gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 113 bits (282), Expect = 3e-28
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLL+RYTVKETQLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 149 NEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206
>gb|PPD68418.1| hypothetical protein GOBAR_DD34699 [Gossypium barbadense]
Length = 124
Score = 110 bits (275), Expect = 3e-28
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = +3
Query: 6 EEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
EEKKTLL+RYTVKETQLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 68 EEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 124
>gb|KQK10218.1| hypothetical protein BRADI_2g52777v3 [Brachypodium distachyon]
Length = 149
Score = 111 bits (277), Expect = 3e-28
Identities = 53/58 (91%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
N+EKKTLLERYT+KETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 92 NDEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 149
>ref|XP_024187492.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Rosa
chinensis]
gb|PRQ56167.1| putative DNA-directed RNA polymerase [Rosa chinensis]
Length = 206
Score = 112 bits (281), Expect = 4e-28
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQL DPIARYYGL RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 149 NEEKKTLLERYTVKETQLPRIQLIDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206
>ref|XP_024028624.1| DNA-directed RNA polymerases II and IV subunit 5A [Morus notabilis]
ref|XP_024028625.1| DNA-directed RNA polymerases II and IV subunit 5A [Morus notabilis]
Length = 206
Score = 112 bits (281), Expect = 4e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 149 NEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206
>gb|POO00886.1| DNA-directed RNA polymerase RPB5 subunit, eukaryote/virus [Trema
orientalis]
Length = 206
Score = 112 bits (281), Expect = 4e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 149 NEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206
>gb|PON62276.1| DNA-directed RNA polymerase RPB5 subunit, eukaryote/virus
[Parasponia andersonii]
Length = 206
Score = 112 bits (281), Expect = 4e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 149 NEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_022991826.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023547519.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
pepo subsp. pepo]
Length = 206
Score = 112 bits (281), Expect = 4e-28
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 NEEKKTLLERYTVKETQLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 176
NEEKKTLLERYTVKETQLPRIQ++DP+ARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 149 NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206