BLASTX nr result

ID: Acanthopanax24_contig00008482 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00008482
         (645 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV58277.1| hypothetical protein CFOL_v3_01811 [Cephalotus f...    58   2e-07

>dbj|GAV58277.1| hypothetical protein CFOL_v3_01811 [Cephalotus follicularis]
          Length = 102

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 27/48 (56%), Positives = 29/48 (60%)
 Frame = +3

Query: 84  MLSCYLLLYLHHRVWEEQGWEVMVHHNRHLWVEWGCLQCPHLACHQWA 227
           MLSC LL  LHH+  E   W  +  HN H WV W CLQC   ACHQWA
Sbjct: 1   MLSCCLLHCLHHQCRE---WVEVSLHNHHQWVGWECLQCQLSACHQWA 45


Top