BLASTX nr result
ID: Acanthopanax24_contig00007946
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00007946
(408 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017214761.1| PREDICTED: H/ACA ribonucleoprotein complex s... 119 2e-28
ref|XP_017246834.1| PREDICTED: H/ACA ribonucleoprotein complex s... 115 3e-27
ref|XP_021749223.1| H/ACA ribonucleoprotein complex subunit 4-li... 105 7e-24
ref|XP_021725549.1| H/ACA ribonucleoprotein complex subunit 4-li... 104 2e-23
gb|OMO88041.1| Pseudouridine synthase/archaeosine transglycosyla... 104 2e-23
gb|OMO59282.1| Pseudouridine synthase/archaeosine transglycosyla... 103 5e-23
gb|PHU29084.1| H/ACA ribonucleoprotein complex subunit 4 [Capsic... 99 6e-23
gb|KNA16764.1| hypothetical protein SOVF_086290 [Spinacia oleracea] 103 7e-23
ref|XP_021862630.1| H/ACA ribonucleoprotein complex subunit 4-li... 103 7e-23
gb|KNA18045.1| hypothetical protein SOVF_074420, partial [Spinac... 101 1e-22
ref|XP_021841654.1| H/ACA ribonucleoprotein complex subunit 4-li... 102 2e-22
gb|OVA06252.1| Pseudouridine synthase/archaeosine transglycosyla... 102 2e-22
ref|XP_009788100.1| PREDICTED: H/ACA ribonucleoprotein complex s... 102 2e-22
dbj|GAU37758.1| hypothetical protein TSUD_102740 [Trifolium subt... 102 2e-22
ref|XP_010685781.1| PREDICTED: H/ACA ribonucleoprotein complex s... 101 2e-22
ref|XP_021720875.1| H/ACA ribonucleoprotein complex subunit 4-li... 101 2e-22
ref|XP_021845318.1| H/ACA ribonucleoprotein complex subunit 4-li... 101 2e-22
ref|XP_021650846.1| H/ACA ribonucleoprotein complex subunit 4-li... 101 3e-22
gb|OVA18343.1| Pseudouridine synthase/archaeosine transglycosyla... 100 4e-22
ref|XP_013456513.1| centromere/microtubule-binding protein [Medi... 100 4e-22
>ref|XP_017214761.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Daucus
carota subsp. sativus]
gb|KZM92417.1| hypothetical protein DCAR_020218 [Daucus carota subsp. sativus]
Length = 615
Score = 119 bits (297), Expect = 2e-28
Identities = 74/143 (51%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGPKASMKKKLV+EGKLDKHGKPNE+TPAEWMRN V PTGGDS+V SLAA TE V+VKA
Sbjct: 370 GLGPKASMKKKLVSEGKLDKHGKPNESTPAEWMRNVVYPTGGDSVVASLAAGTESVNVKA 429
Query: 183 EVPDVEAD-----XXXXXXXXXXXXXXXLEETDASPAPE---LHKXXXXXXXXXXXXXXX 338
E+P E + LEE DAS APE K
Sbjct: 430 EIPVEEVEKTKKKKNKDRENEEDGRKRKLEEADASHAPEHTKKPKVEEAEETLDSEKKDK 489
Query: 339 XXXXXXXXXXXAVASDGETAKKE 407
ASDGETAKKE
Sbjct: 490 KKKKKKNQDDEINASDGETAKKE 512
>ref|XP_017246834.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Daucus
carota subsp. sativus]
gb|KZM98464.1| hypothetical protein DCAR_014174 [Daucus carota subsp. sativus]
Length = 563
Score = 115 bits (287), Expect = 3e-27
Identities = 73/136 (53%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGPKASMKKKLVAEGKLDKHGKPNE TPAEW+RN VLPTGGDS+V L+AVTE VKA
Sbjct: 371 GLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGGDSIVAGLSAVTE--PVKA 428
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPELHKXXXXXXXXXXXXXXXXXXXXXXX 362
E P E+D LE+TD+SPAPE+ K
Sbjct: 429 E-PIEESD-----VKKKKKDKRKLEDTDSSPAPEVSKKIKVEEALESDKKDKKKKKKKGG 482
Query: 363 XXXAVA-SDGETAKKE 407
A A SD ET KKE
Sbjct: 483 EEEAAAVSDVETPKKE 498
>ref|XP_021749223.1| H/ACA ribonucleoprotein complex subunit 4-like [Chenopodium quinoa]
Length = 567
Score = 105 bits (263), Expect = 7e-24
Identities = 57/97 (58%), Positives = 64/97 (65%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+AEGKLDKHGKPNE TPAEW RN VLPTGGDSM+ S+AA E A
Sbjct: 378 GLGPRASMKKKLIAEGKLDKHGKPNEQTPAEWARNVVLPTGGDSMIASIAAAAE----PA 433
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPELHK 293
E DV + LEE DASPA ++ K
Sbjct: 434 EAEDVVVE-----GKKEKKSKRKLEEVDASPAGDVKK 465
>ref|XP_021725549.1| H/ACA ribonucleoprotein complex subunit 4-like [Chenopodium quinoa]
Length = 571
Score = 104 bits (260), Expect = 2e-23
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+AEGKLDKHGKPNE TPAEW RN VLPTGGDSM+ S+AA E KA
Sbjct: 382 GLGPRASMKKKLIAEGKLDKHGKPNEQTPAEWARNVVLPTGGDSMIASIAAAAE--PAKA 439
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPELHK 293
E VE LEE DASPA ++ K
Sbjct: 440 EDVVVE-------EKKEKKSKRKLEEVDASPAGDVKK 469
>gb|OMO88041.1| Pseudouridine synthase/archaeosine transglycosylase [Corchorus
capsularis]
Length = 583
Score = 104 bits (260), Expect = 2e-23
Identities = 50/68 (73%), Positives = 55/68 (80%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP ASMKKKL+AEGKLDKHGKPNENTP EWMRN VLPTGGD+MV SLAA T+L +
Sbjct: 376 GLGPNASMKKKLIAEGKLDKHGKPNENTPKEWMRNVVLPTGGDAMVASLAASTQLDAKNG 435
Query: 183 EVPDVEAD 206
E VE +
Sbjct: 436 ETAAVEKE 443
>gb|OMO59282.1| Pseudouridine synthase/archaeosine transglycosylase [Corchorus
olitorius]
Length = 587
Score = 103 bits (257), Expect = 5e-23
Identities = 52/73 (71%), Positives = 57/73 (78%), Gaps = 7/73 (9%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVT------- 161
GLGP ASMKKKL+AEGKLDKHGKPNENTP EWMRN VLPTGGD+MV SLAA T
Sbjct: 376 GLGPNASMKKKLIAEGKLDKHGKPNENTPKEWMRNVVLPTGGDAMVASLAASTQPDAKNG 435
Query: 162 ELVSVKAEVPDVE 200
E +V+ E+ DVE
Sbjct: 436 ETAAVEKEIIDVE 448
>gb|PHU29084.1| H/ACA ribonucleoprotein complex subunit 4 [Capsicum chinense]
Length = 242
Score = 99.4 bits (246), Expect = 6e-23
Identities = 51/68 (75%), Positives = 55/68 (80%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKLVAEGKLDKHGKPNE TPAEWMRN VLPTGGD+MV LAA +VK
Sbjct: 11 GLGPRASMKKKLVAEGKLDKHGKPNEKTPAEWMRNVVLPTGGDAMVAGLAA----ANVKP 66
Query: 183 EVPDVEAD 206
+ PD AD
Sbjct: 67 D-PDAVAD 73
>gb|KNA16764.1| hypothetical protein SOVF_086290 [Spinacia oleracea]
Length = 598
Score = 103 bits (256), Expect = 7e-23
Identities = 55/94 (58%), Positives = 63/94 (67%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+A+GKLDKHGKPNE TP EW RN VLPTGGDSM+ S+AA + VKA
Sbjct: 386 GLGPRASMKKKLIADGKLDKHGKPNEQTPVEWARNVVLPTGGDSMIASIAA-SPAEPVKA 444
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPE 284
E DV + LEE DASPA +
Sbjct: 445 EADDVVVE-----EKKEKKHKRKLEEVDASPAAD 473
>ref|XP_021862630.1| H/ACA ribonucleoprotein complex subunit 4-like [Spinacia oleracea]
Length = 599
Score = 103 bits (256), Expect = 7e-23
Identities = 55/94 (58%), Positives = 63/94 (67%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+A+GKLDKHGKPNE TP EW RN VLPTGGDSM+ S+AA + VKA
Sbjct: 387 GLGPRASMKKKLIADGKLDKHGKPNEQTPVEWARNVVLPTGGDSMIASIAA-SPAEPVKA 445
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPE 284
E DV + LEE DASPA +
Sbjct: 446 EADDVVVE-----EKKEKKHKRKLEEVDASPAAD 474
>gb|KNA18045.1| hypothetical protein SOVF_074420, partial [Spinacia oleracea]
Length = 452
Score = 101 bits (252), Expect = 1e-22
Identities = 54/94 (57%), Positives = 62/94 (65%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+A+GKLDKHGKPNE TP EW RN VLPTGGDSM+ S+AA + VKA
Sbjct: 243 GLGPRASMKKKLIADGKLDKHGKPNEQTPVEWARNVVLPTGGDSMIASIAA-SPAEPVKA 301
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPE 284
E DV + LEE D SPA +
Sbjct: 302 EADDVVVE-----EKKEKKHKRKLEEVDVSPAAD 330
>ref|XP_021841654.1| H/ACA ribonucleoprotein complex subunit 4-like [Spinacia oleracea]
gb|KNA15312.1| hypothetical protein SOVF_099290 [Spinacia oleracea]
Length = 587
Score = 102 bits (253), Expect = 2e-22
Identities = 53/94 (56%), Positives = 60/94 (63%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+A+GKLDKHGKPNE TP EW RN VLPTGGDSM+ S+AA E
Sbjct: 387 GLGPRASMKKKLIADGKLDKHGKPNEQTPVEWARNVVLPTGGDSMIASIAASAE------ 440
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPE 284
V+AD LEE DASPA +
Sbjct: 441 ---PVKADDVVVEEKKEKKHKRKLEEVDASPAAD 471
>gb|OVA06252.1| Pseudouridine synthase/archaeosine transglycosylase [Macleaya
cordata]
Length = 593
Score = 102 bits (253), Expect = 2e-22
Identities = 56/96 (58%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGPKASMKKKL+AEG LDKHGKPNE TPAEW RN VLPTGGD+MV LAAV E KA
Sbjct: 390 GLGPKASMKKKLIAEGLLDKHGKPNEKTPAEWRRNVVLPTGGDTMVAGLAAVAEPPLEKA 449
Query: 183 E---VPDVEADXXXXXXXXXXXXXXXLEETDASPAP 281
+ V + + LEET SPAP
Sbjct: 450 DGAIVEEKKKKKKQKDEEDGEGRKRKLEETSDSPAP 485
>ref|XP_009788100.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Nicotiana
sylvestris]
ref|XP_016439734.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Nicotiana tabacum]
Length = 598
Score = 102 bits (253), Expect = 2e-22
Identities = 57/104 (54%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVT-----EL 167
GLGP+ASMKKKLVAEGKLDKHGKPNE TPAEW+RN VLPTGGD+MV LAA ++
Sbjct: 383 GLGPRASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGGDAMVAGLAAANVKTDPDV 442
Query: 168 VSVKAEVPDVE--ADXXXXXXXXXXXXXXXLEETDASPAPELHK 293
V V DVE L++ DASPAP K
Sbjct: 443 VPADGAVGDVEKKKKKKHKEDEEEEGNKRKLDDLDASPAPSALK 486
>dbj|GAU37758.1| hypothetical protein TSUD_102740 [Trifolium subterraneum]
Length = 609
Score = 102 bits (253), Expect = 2e-22
Identities = 53/93 (56%), Positives = 62/93 (66%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+A+GKLDKHGKPNE+TP EWMRN VLPTGGDS++ +AA TE VK
Sbjct: 382 GLGPRASMKKKLIAQGKLDKHGKPNESTPQEWMRNVVLPTGGDSVIAGMAAATE--DVKK 439
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAP 281
EV D + + E D SPAP
Sbjct: 440 EVADEDGEKVKKDGDGEGRKRKKHESVD-SPAP 471
>ref|XP_010685781.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Beta vulgaris
subsp. vulgaris]
gb|KMT05263.1| hypothetical protein BVRB_7g174020 [Beta vulgaris subsp. vulgaris]
Length = 570
Score = 101 bits (252), Expect = 2e-22
Identities = 52/94 (55%), Positives = 62/94 (65%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+AEGKLDKHGKPNE TP EW RN VLPTGGDSM+ S+AA + V +
Sbjct: 383 GLGPRASMKKKLIAEGKLDKHGKPNEKTPTEWARNVVLPTGGDSMIASIAASADPVKTEE 442
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPE 284
V + + + LEE DASPA +
Sbjct: 443 TVVEEKKE---------KKHKRKLEEVDASPAAD 467
>ref|XP_021720875.1| H/ACA ribonucleoprotein complex subunit 4-like [Chenopodium quinoa]
Length = 573
Score = 101 bits (252), Expect = 2e-22
Identities = 52/97 (53%), Positives = 64/97 (65%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+AEGKLDKHGKPNE TPAEW RN VLPTGGDS++ S+AA E + +
Sbjct: 385 GLGPRASMKKKLIAEGKLDKHGKPNEQTPAEWARNVVLPTGGDSVIASIAAAAEPATAED 444
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPELHK 293
V + + + LEE DASP ++ K
Sbjct: 445 VVVEEKKE---------KKSKRKLEEVDASPGGDVKK 472
>ref|XP_021845318.1| H/ACA ribonucleoprotein complex subunit 4-like [Spinacia oleracea]
Length = 596
Score = 101 bits (252), Expect = 2e-22
Identities = 54/94 (57%), Positives = 62/94 (65%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+A+GKLDKHGKPNE TP EW RN VLPTGGDSM+ S+AA + VKA
Sbjct: 387 GLGPRASMKKKLIADGKLDKHGKPNEQTPVEWARNVVLPTGGDSMIASIAA-SPAEPVKA 445
Query: 183 EVPDVEADXXXXXXXXXXXXXXXLEETDASPAPE 284
E DV + LEE D SPA +
Sbjct: 446 EADDVVVE-----EKKEKKHKRKLEEVDVSPAAD 474
>ref|XP_021650846.1| H/ACA ribonucleoprotein complex subunit 4-like [Hevea brasiliensis]
Length = 615
Score = 101 bits (251), Expect = 3e-22
Identities = 51/70 (72%), Positives = 58/70 (82%), Gaps = 2/70 (2%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAA--VTELVSV 176
GLGPKASMKKKL+AEGKLDKHGKPNENTP EWMRN VLPTGGDS+V SLAA E+ +V
Sbjct: 385 GLGPKASMKKKLIAEGKLDKHGKPNENTPQEWMRNLVLPTGGDSIVASLAAEPEKEVNAV 444
Query: 177 KAEVPDVEAD 206
K + +VE +
Sbjct: 445 KKDNGEVEEE 454
>gb|OVA18343.1| Pseudouridine synthase/archaeosine transglycosylase [Macleaya
cordata]
Length = 594
Score = 100 bits (250), Expect = 4e-22
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGPKASMKKK++AEGKLDKHGKP E+TPAEW+RN VLP GGDS+V LAA TE V+VK
Sbjct: 398 GLGPKASMKKKMIAEGKLDKHGKPKEDTPAEWLRNVVLPAGGDSVVAGLAAATEPVAVKV 457
Query: 183 E 185
+
Sbjct: 458 D 458
>ref|XP_013456513.1| centromere/microtubule-binding protein [Medicago truncatula]
gb|KEH30544.1| centromere/microtubule-binding protein [Medicago truncatula]
Length = 612
Score = 100 bits (250), Expect = 4e-22
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = +3
Query: 3 GLGPKASMKKKLVAEGKLDKHGKPNENTPAEWMRNAVLPTGGDSMVVSLAAVTELVSVKA 182
GLGP+ASMKKKL+A GKLDKHGKPNE+TP EWMRN VLPTGGD+++ +AA T VK
Sbjct: 380 GLGPRASMKKKLIAAGKLDKHGKPNESTPQEWMRNVVLPTGGDAVIAGMAAATGTEDVKK 439
Query: 183 EVPDVEAD 206
EV D E +
Sbjct: 440 EVADEEGE 447