BLASTX nr result
ID: Acanthopanax24_contig00006014
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00006014
(669 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_026999916.1| ribonuclease H [Eisenibacter elegans] 64 5e-09
ref|WP_005927464.1| hypothetical protein [Bacteroides salyersiae... 62 3e-08
dbj|GAK01363.1| LOW QUALITY PROTEIN: ribonuclease HI-related pro... 62 6e-08
ref|XP_021836735.1| uncharacterized protein LOC110776486 [Spinac... 59 9e-08
ref|WP_007479300.1| ribonuclease H [Bacteroides salyersiae] >gi|... 61 1e-07
ref|WP_055293257.1| ribonuclease H [Bacteroides salyersiae] >gi|... 61 1e-07
emb|CCY52721.1| uncharacterized protein BN523_00939 [Bacteroides... 61 1e-07
ref|WP_090831861.1| MULTISPECIES: ribonuclease H [Bacillus] >gi|... 60 2e-07
ref|WP_042420732.1| ribonuclease H [Geomicrobium sp. JCM 19038] ... 60 2e-07
ref|WP_007210946.1| MULTISPECIES: ribonuclease H [Bacteroides] >... 60 3e-07
ref|WP_101520430.1| ribonuclease HI [Chromatocurvus sp. F02] >gi... 60 3e-07
emb|SHF20014.1| ribonuclease HI [Bacteroides faecichinchillae] 60 3e-07
ref|WP_027847416.1| ribonuclease H [Marinococcus halotolerans] 59 3e-07
ref|WP_038478282.1| MULTISPECIES: ribonuclease H [Bacillus] >gi|... 59 5e-07
ref|WP_077155623.1| ribonuclease H [Bacteroides bouchesdurhonensis] 59 5e-07
ref|WP_041044743.1| ribonuclease H [Paenibacillus sp. VKM B-2647... 59 5e-07
ref|WP_106069710.1| ribonuclease H [Bacteroides heparinolyticus]... 59 5e-07
ref|WP_060385620.1| ribonuclease H [Bacteroides stercoris] 59 6e-07
ref|WP_005656019.1| ribonuclease H [Bacteroides stercoris] >gi|1... 59 6e-07
ref|WP_094909003.1| ribonuclease H [Marinococcus halophilus] >gi... 59 6e-07
>ref|WP_026999916.1| ribonuclease H [Eisenibacter elegans]
Length = 202
Score = 64.3 bits (155), Expect = 5e-09
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 20/92 (21%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHAPQVL 325
M++ FYVVW G+ PG+YS+WP CEAQ K +G+ YK + T A A + P ++P+
Sbjct: 1 MAQQKFYVVWKGRKPGVYSSWPSCEAQIKAFNGASYKSFATRSEADAAFKAGPRYSPKAK 60
Query: 324 ------PP--------------PGLLQYRLMH 289
PP PGL++Y+ +H
Sbjct: 61 AAKSSNPPILNSLSVDAACSGNPGLMEYQGVH 92
>ref|WP_005927464.1| hypothetical protein [Bacteroides salyersiae]
gb|EOA50617.1| hypothetical protein HMPREF1532_01670 [Bacteroides salyersiae WAL
10018 = DSM 18765 = JCM 12988]
Length = 211
Score = 62.4 bits (150), Expect = 3e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHA 337
M + FYVVW G PGIY++W EC+ QTKG G+ YK + T++ A A HS P+A
Sbjct: 1 MGKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTYEEAERAF-HSSPYA 55
>dbj|GAK01363.1| LOW QUALITY PROTEIN: ribonuclease HI-related protein 3
[Geomicrobium sp. JCM 19055]
Length = 213
Score = 61.6 bits (148), Expect = 6e-08
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQ 355
M++ +YVVW G+ PGIY+TW ECEA+ KG G+ +K Y T++ A A Q
Sbjct: 1 MAKKKYYVVWKGRKPGIYTTWAECEAEVKGFKGARFKSYPTYEEAKQAFQ 50
>ref|XP_021836735.1| uncharacterized protein LOC110776486 [Spinacia oleracea]
Length = 98
Score = 58.5 bits (140), Expect = 9e-08
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = -1
Query: 507 KMSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHAPQV 328
K +RF+ YVVW G+ PG+Y +W EC Q KG + ++G+Y +SA A + +
Sbjct: 21 KGTRFSHYVVWNGRKPGVYESWDECSKQVKGFKNATFRGFYDLESAVAAFKRKEEGPLSI 80
Query: 327 LP 322
+P
Sbjct: 81 VP 82
>ref|WP_007479300.1| ribonuclease H [Bacteroides salyersiae]
gb|EIY66670.1| hypothetical protein HMPREF1071_01431 [Bacteroides salyersiae
CL02T12C01]
Length = 211
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHA 337
M + FYVVW G PGIY++W EC+ QTKG G+ YK + T + A A HS P+A
Sbjct: 1 MGKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTHEEAERAF-HSSPYA 55
>ref|WP_055293257.1| ribonuclease H [Bacteroides salyersiae]
emb|CUM71186.1| Predicted double-stranded RNA/RNA-DNA hybrid binding protein
[Bacteroides salyersiae]
Length = 211
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHA 337
M + FYVVW G PGIY++W EC+ QTKG G+ YK + T + A A HS P+A
Sbjct: 1 MGKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTHEEAERAF-HSSPYA 55
>emb|CCY52721.1| uncharacterized protein BN523_00939 [Bacteroides sp. CAG:189]
Length = 211
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHA 337
M + FYVVW G PGIY++W EC+ QTKG G+ YK + T + A A HS P+A
Sbjct: 1 MGKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTHEEAERAF-HSSPYA 55
>ref|WP_090831861.1| MULTISPECIES: ribonuclease H [Bacillus]
emb|SFQ85423.1| ribonuclease HI [Bacillus sp. cl95]
emb|SFA90892.1| ribonuclease HI [Bacillus sp. UNCCL13]
Length = 206
Score = 60.1 bits (144), Expect = 2e-07
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHAPQ 331
M+ FYVVW G+ PGIY TW ECEAQTKG G+ +K + + A A +P P+
Sbjct: 1 MASKKFYVVWSGRKPGIYKTWAECEAQTKGYQGARFKSFPSQKEAEEAFSKAPSSTPR 58
>ref|WP_042420732.1| ribonuclease H [Geomicrobium sp. JCM 19038]
dbj|GAK10059.1| ribonuclease HI-related protein 3 [Geomicrobium sp. JCM 19038]
Length = 210
Score = 60.1 bits (144), Expect = 2e-07
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQ 355
M++ +YVVW G+ PGIY+TW ECE++ KG G+ +K Y T++ A A Q
Sbjct: 1 MAKKKYYVVWKGRKPGIYTTWAECESEVKGFKGARFKSYPTYEEAKRAFQ 50
>ref|WP_007210946.1| MULTISPECIES: ribonuclease H [Bacteroides]
gb|EEF90890.1| ribonuclease H [Bacteroides cellulosilyticus DSM 14838]
gb|EIY32542.1| hypothetical protein HMPREF1062_02100 [Bacteroides cellulosilyticus
CL02T12C19]
emb|CDB72988.1| uncharacterized protein BN506_00546 [Bacteroides cellulosilyticus
CAG:158]
gb|ALJ59687.1| Ribonuclease H [Bacteroides cellulosilyticus]
gb|KWR58176.1| ribonuclease H [Bacteroides cellulosilyticus]
gb|KXT42664.1| putative ribonuclease H [Bacteroides intestinalis]
Length = 211
Score = 59.7 bits (143), Expect = 3e-07
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSP 346
MS+ FYVVW G PGIY++W +C+ QTKG G+ YK + T + A A + SP
Sbjct: 1 MSKEKFYVVWSGVNPGIYTSWTDCQLQTKGYEGAKYKSFETREEAEKAFESSP 53
>ref|WP_101520430.1| ribonuclease HI [Chromatocurvus sp. F02]
gb|PLW83749.1| ribonuclease HI [Chromatocurvus sp. F02]
Length = 247
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPHAPQVL 325
M++ +YV+W G PGIY++WPE E Q KG +G+ YK + T + A A P P
Sbjct: 1 MAKQKYYVIWAGAIPGIYTSWPEAERQVKGFAGARYKSFMTREEAETAYSRGPAAKPAAR 60
Query: 324 PP 319
P
Sbjct: 61 KP 62
>emb|SHF20014.1| ribonuclease HI [Bacteroides faecichinchillae]
Length = 220
Score = 59.7 bits (143), Expect = 3e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -1
Query: 522 ISRSIKMSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSP 346
I + + M + +YVVW G PGIY++W EC+ Q KG G+ YK + T + A +AI SP
Sbjct: 4 IDQLLSMGKQKYYVVWEGVTPGIYTSWTECQLQIKGYDGAKYKSFDTREEAEHAIATSP 62
>ref|WP_027847416.1| ribonuclease H [Marinococcus halotolerans]
Length = 196
Score = 59.3 bits (142), Expect = 3e-07
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHS 349
M++ +YVVW GK PGIYSTW ECE Q KG G+ +K + +++ A A +S
Sbjct: 1 MAKKKWYVVWKGKKPGIYSTWAECEKQVKGFKGARFKSFSSYEEAETAFNNS 52
>ref|WP_038478282.1| MULTISPECIES: ribonuclease H [Bacillus]
gb|AIC93771.1| ribonuclease H [Bacillus lehensis G1]
gb|KQL59103.1| ribonuclease H [Bacillus plakortidis]
Length = 210
Score = 58.9 bits (141), Expect = 5e-07
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSP 346
M++ +YVVW GK PGIY TW ECE Q KG G+ YK + T + A A P
Sbjct: 1 MAKQKYYVVWAGKKPGIYETWSECERQVKGFKGARYKSFPTKNEAEQAFLGKP 53
>ref|WP_077155623.1| ribonuclease H [Bacteroides bouchesdurhonensis]
Length = 211
Score = 58.9 bits (141), Expect = 5e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSP 346
M + FYVVW G PGIY++W EC+ Q KG G+ YK + T + A +AI SP
Sbjct: 1 MGKQKFYVVWEGVTPGIYTSWTECQLQIKGYDGAKYKSFDTREEAEHAIATSP 53
>ref|WP_041044743.1| ribonuclease H [Paenibacillus sp. VKM B-2647]
gb|KIL42425.1| ribonuclease H [Paenibacillus sp. VKM B-2647]
Length = 211
Score = 58.9 bits (141), Expect = 5e-07
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -1
Query: 489 FYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQ 355
+YVVWVG+ PGIY TWP+C+ QTKG+ + YK Y T A A +
Sbjct: 8 YYVVWVGRQPGIYRTWPDCQEQTKGVPDAKYKSYETLQEAEKAYE 52
>ref|WP_106069710.1| ribonuclease H [Bacteroides heparinolyticus]
gb|AVM58074.1| ribonuclease H [Bacteroides heparinolyticus]
Length = 212
Score = 58.9 bits (141), Expect = 5e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSPPH 340
M + FYVVW G PGIYS+W +C+ QTKG G+ +K + T + A A SP H
Sbjct: 1 MKKEKFYVVWSGVTPGIYSSWTDCQLQTKGYEGAKFKSFDTREEAEKAFASSPYH 55
>ref|WP_060385620.1| ribonuclease H [Bacteroides stercoris]
Length = 214
Score = 58.9 bits (141), Expect = 6e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSP 346
M + FYVVW G PGIY++W EC+ QTKG G+ +K + T + A +A SP
Sbjct: 1 MKKEKFYVVWAGVTPGIYTSWTECQLQTKGYEGAKFKSFDTREEAEHAFAASP 53
>ref|WP_005656019.1| ribonuclease H [Bacteroides stercoris]
gb|EDS14807.1| hypothetical protein BACSTE_02495 [Bacteroides stercoris ATCC
43183]
Length = 214
Score = 58.9 bits (141), Expect = 6e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHSP 346
M + FYVVW G PGIY++W EC+ QTKG G+ +K + T + A +A SP
Sbjct: 1 MKKEKFYVVWAGVTPGIYTSWTECQLQTKGYEGAKFKSFDTREEAEHAFAASP 53
>ref|WP_094909003.1| ribonuclease H [Marinococcus halophilus]
gb|OZT79026.1| ribonuclease H [Marinococcus halophilus]
Length = 196
Score = 58.5 bits (140), Expect = 6e-07
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -1
Query: 504 MSRFAFYVVWVGKCPGIYSTWPECEAQTKGLSGSCYKGYYTFDSAYYAIQHS 349
M++ +YVVW GK PGIYSTW ECE Q KG G+ +K + +++ A A +S
Sbjct: 1 MAKKKWYVVWRGKKPGIYSTWAECEKQVKGFKGAKFKSFPSYEEAEAAFNNS 52