BLASTX nr result

ID: Acanthopanax24_contig00005834 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00005834
         (548 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POF10759.1| polyadenylate-binding protein 2 [Quercus suber]         59   6e-07
ref|XP_023912125.1| LOW QUALITY PROTEIN: polyadenylate-binding p...    59   7e-07

>gb|POF10759.1| polyadenylate-binding protein 2 [Quercus suber]
          Length = 341

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = -3

Query: 546 SNPEEAKKALKSLNGTVVKGRSLDVVVAQSKEERNKSLQ--MTQHPPQSLYTSNWDV 382
           SNPE+A KAL +LNGT ++G++L V +AQ KE+R ++LQ    Q  P++ Y  NW+V
Sbjct: 129 SNPEDAMKALHTLNGTTLEGKTLCVAIAQRKEDRIRTLQNRYAQFSPETFYNCNWNV 185


>ref|XP_023912125.1| LOW QUALITY PROTEIN: polyadenylate-binding protein 6-like [Quercus
           suber]
          Length = 574

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = -3

Query: 546 SNPEEAKKALKSLNGTVVKGRSLDVVVAQSKEERNKSLQ--MTQHPPQSLYTSNWDV 382
           SNPE+A KAL +LNGT ++G++L V +AQ KE+R ++LQ    Q  P++ Y  NW+V
Sbjct: 367 SNPEDAMKALHTLNGTTLEGKTLCVAIAQRKEDRIRTLQNRYAQFSPETFYNCNWNV 423


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