BLASTX nr result

ID: Acanthopanax24_contig00004188 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00004188
         (1860 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021355588.1| extensin-like [Mizuhopecten yessoensis]            64   8e-07
ref|XP_024284396.1| extensin-like [Oncorhynchus tshawytscha]           60   9e-06

>ref|XP_021355588.1| extensin-like [Mizuhopecten yessoensis]
          Length = 766

 Score = 63.9 bits (154), Expect = 8e-07
 Identities = 94/357 (26%), Positives = 131/357 (36%), Gaps = 18/357 (5%)
 Frame = -2

Query: 1037 PPHPLPPLQDCHCKTDTWYLLLCLNIRTPAQSEPLSNKSDPSAYSNQTLFPNTVTHLMKL 858
            PP PLP L+  H  T T    L  ++       PL++             PN       L
Sbjct: 367  PPQPLPNLKH-HTSTSTTPKPLTPHL-------PLNHSQTSPPTPPYQPLPN-------L 411

Query: 857  LPHPDMTKSTLPGTHTTPALPLPNSKIILSQLPSNGKSARPH*MSRHINAEAQTENDLQ* 678
              HP  + +  P T T P  PLPN    L+   S   + +PH    H+N  +QT +    
Sbjct: 412  TSHPSTSITPKPHTPTLPPKPLPN----LTTHTSTPITPKPHAPHLHLN-HSQTPHP--- 463

Query: 677  VRLPKPSQPIWLLTANPKTA---KRSNPSAADDQSSSVDP--------PDLKVPSRTS*P 531
                 P QP   LT++P T+   K   P    + S +  P        P+L  P+ TS  
Sbjct: 464  ---TPPPQPHPNLTSHPSTSITPKPHTPHLHINHSQTSHPTSPPHPPSPNLTPPTSTS-T 519

Query: 530  SARPLKTDAELPHSKVLGSI*QTPAELPTPKPNGRTIRSP-------PTSHNQTAQPLPS 372
            + +P      L HS+        P  LP   P+  T  +P       P +H+QT+ P P 
Sbjct: 520  TPKPHTPHLPLNHSQTSHPT-PPPQSLPNLTPHTSTSTTPKPHTPHLPLNHSQTSHPTPP 578

Query: 371  PVLRAASCRPPSGGLEHHLGSSNN*PKQIIPVPYRARCRPRPNLQTKPTDSQHRPAADPT 192
            P     +  PP   L H   S    P Q +P        P P+  T  T + H P     
Sbjct: 579  P-QSLPNLTPPHFHLNHSQTSQPTPPPQPLP-------NPTPHTSTSTTPNPHTPHLHLN 630

Query: 191  INYQAKTSDARAVKVEPSSIA*SPVEDSWPKNSH*GHHLVRSDPHPLTPTKPTSNPR 21
                ++TS        P+S    P  +  P  S      +   PH  TP  PT   R
Sbjct: 631  ---PSQTS-------HPTSPPHPPSPNLTPHTS----TSITPKPHTPTPNYPTQTSR 673


>ref|XP_024284396.1| extensin-like [Oncorhynchus tshawytscha]
          Length = 611

 Score = 60.5 bits (145), Expect = 9e-06
 Identities = 86/318 (27%), Positives = 126/318 (39%), Gaps = 1/318 (0%)
 Frame = -2

Query: 980  LLLCLNIRTPAQSEPLSNKSDPSAYSNQTLFPNTVTHLMKLLPHPDMTKSTLPGTHTTPA 801
            LLL L  + P    PL   +  S  S+ ++  +  T L   LP     + TLP +H+ P 
Sbjct: 335  LLLSLPTQLPPSRSPLITLTPGSVPSSPSITSSPTTLLTHHLP--SSPRITLPSSHSIP- 391

Query: 800  LPLPNSKIILSQLPSNGKSARPH*MSRHINAEAQTENDLQ*VRLPKPSQPIWLLTANPKT 621
               P+S   ++  P       P  +  HI        DL       PS P   +T+ P T
Sbjct: 392  ---PSSPHHITPFPHQPSRTHPPFLPTHIPLLPSAHADL-------PSSPP--ITSFPTT 439

Query: 620  AKRSNPSAADDQSSSVDPPDLKVPSRTS*PSARPLKTDAELPHSKVLGSI*QTPAELPTP 441
               S+P  +   +S    P + +PS +  PS  PL     LP S ++ S+      LPT 
Sbjct: 440  LPISSPITSSSHASIPFRPRITIPSSSHSPS--PLNYTRPLPSSTLITSL------LPT- 490

Query: 440  KPNGRTIRSPPTSHNQTAQPL-PSPVLRAASCRPPSGGLEHHLGSSNN*PKQIIPVPYRA 264
                  +   P   + ++ P+ PSP        PPS    HHL SS   P  ++  P+  
Sbjct: 491  ----HNLPFRPAHPSLSSSPIPPSP--------PPSPTHYHHLPSS---PHPLL--PFSP 533

Query: 263  RCRPRPNLQTKPTDSQHRPAADPTINYQAKTSDARAVKVEPSSIA*SPVEDSWPKNSH*G 84
              +P P L T P+   H P   P I     TS       +PSS+     +   P   H  
Sbjct: 534  LIKP-PFLPTHPSFPHHPP---PLITALLPTSS------QPSSL-----QRHHPLPPHSS 578

Query: 83   HHLVRSDPHPLTPTKPTS 30
                 + P+ +TP  PTS
Sbjct: 579  TSFPTTPPNFITPFLPTS 596


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