BLASTX nr result
ID: Acanthopanax24_contig00003679
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00003679
(612 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus c... 92 4e-19
ref|XP_021627992.1| THO complex subunit 4A-like [Manihot esculen... 92 4e-19
ref|XP_009629373.1| PREDICTED: LOW QUALITY PROTEIN: THO complex ... 92 5e-19
gb|OIT37420.1| tho complex subunit 4b, partial [Nicotiana attenu... 89 6e-19
gb|KCW85601.1| hypothetical protein EUGRSUZ_B02389 [Eucalyptus g... 90 8e-19
ref|XP_008448388.1| PREDICTED: THO complex subunit 4A-like isofo... 90 8e-19
gb|KCW85602.1| hypothetical protein EUGRSUZ_B02389 [Eucalyptus g... 90 1e-18
ref|XP_017236718.1| PREDICTED: THO complex subunit 4A-like [Dauc... 90 2e-18
ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptu... 90 2e-18
ref|XP_008448384.1| PREDICTED: THO complex subunit 4A-like isofo... 90 2e-18
ref|XP_004143092.1| PREDICTED: THO complex subunit 4A-like [Cucu... 90 2e-18
ref|XP_012838682.1| PREDICTED: THO complex subunit 4A [Erythrant... 90 2e-18
ref|XP_008803415.1| PREDICTED: THO complex subunit 4A-like isofo... 90 2e-18
gb|PIN11441.1| RRM motif-containing protein [Handroanthus impeti... 89 3e-18
ref|XP_012064998.1| THO complex subunit 4A [Jatropha curcas] >gi... 90 3e-18
gb|PNY06328.1| RNA and export factor-binding protein 2-like [Tri... 87 3e-18
gb|KZV26748.1| THO complex subunit 4A [Dorcoceras hygrometricum] 89 3e-18
ref|XP_008803414.1| PREDICTED: THO complex subunit 4A-like isofo... 89 4e-18
emb|CAG26903.1| ALY protein [Nicotiana benthamiana] 89 4e-18
ref|XP_022729582.1| THO complex subunit 4A-like [Durio zibethinus] 89 5e-18
>ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus communis]
gb|EEF31023.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 247
Score = 92.0 bits (227), Expect = 4e-19
Identities = 47/72 (65%), Positives = 52/72 (72%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYTV 191
+HYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PAA
Sbjct: 122 IHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATPAANG 181
Query: 192 NFNEVQEGHRAG 227
NF R G
Sbjct: 182 NFGNSNGAPRGG 193
>ref|XP_021627992.1| THO complex subunit 4A-like [Manihot esculenta]
gb|OAY37838.1| hypothetical protein MANES_11G133200 [Manihot esculenta]
Length = 239
Score = 91.7 bits (226), Expect = 4e-19
Identities = 47/72 (65%), Positives = 53/72 (73%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYTV 191
+HYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PAA V
Sbjct: 116 IHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPPANNV 175
Query: 192 NFNEVQEGHRAG 227
+F R G
Sbjct: 176 SFGNSNGVPRGG 187
>ref|XP_009629373.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4A-like
[Nicotiana tomentosiformis]
Length = 252
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLY-T 188
+HYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PA+ T
Sbjct: 124 IHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPASPAFNGT 183
Query: 189 VNFNEVQEGHRAG 227
F + G R+G
Sbjct: 184 FGFGDANGGPRSG 196
>gb|OIT37420.1| tho complex subunit 4b, partial [Nicotiana attenuata]
Length = 146
Score = 89.0 bits (219), Expect = 6e-19
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLY-T 188
+HYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ NIA+PAA
Sbjct: 18 IHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGANIATPAAPAFNGA 77
Query: 189 VNFNEVQEGHRAG 227
F + G R+G
Sbjct: 78 FGFGDANGGPRSG 90
>gb|KCW85601.1| hypothetical protein EUGRSUZ_B02389 [Eucalyptus grandis]
Length = 206
Score = 90.1 bits (222), Expect = 8e-19
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAA 173
VHYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PAA
Sbjct: 79 VHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA 132
>ref|XP_008448388.1| PREDICTED: THO complex subunit 4A-like isoform X2 [Cucumis melo]
Length = 191
Score = 89.7 bits (221), Expect = 8e-19
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYTV 191
+HYD+SGRSKG AE +FSRRLDA+ AVK+YNNV+LDG PMKIEI+ TNI++PA G V
Sbjct: 116 IHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAV 175
Query: 192 NFNEVQEG 215
N E G
Sbjct: 176 NPFENSNG 183
>gb|KCW85602.1| hypothetical protein EUGRSUZ_B02389 [Eucalyptus grandis]
Length = 216
Score = 90.1 bits (222), Expect = 1e-18
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAA 173
VHYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PAA
Sbjct: 89 VHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA 142
>ref|XP_017236718.1| PREDICTED: THO complex subunit 4A-like [Daucus carota subsp.
sativus]
gb|KZN04477.1| hypothetical protein DCAR_005314 [Daucus carota subsp. sativus]
Length = 242
Score = 90.1 bits (222), Expect = 2e-18
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 4/77 (5%)
Frame = +3
Query: 3 QSIVHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLL 182
+S+VHYDRSGRSKG AE +FSRR DAL AV +YNNV+LDG PMK+EI+ TNI +PAAG
Sbjct: 114 RSVVHYDRSGRSKGTAEVVFSRRQDALSAVMKYNNVQLDGKPMKVEIVGTNIVTPAAGQP 173
Query: 183 Y----TVNFNEVQEGHR 221
+ NFN V ++
Sbjct: 174 FINNNVSNFNGVPRSNQ 190
>ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptus grandis]
gb|KCW85598.1| hypothetical protein EUGRSUZ_B02389 [Eucalyptus grandis]
gb|KCW85599.1| hypothetical protein EUGRSUZ_B02389 [Eucalyptus grandis]
gb|KCW85600.1| hypothetical protein EUGRSUZ_B02389 [Eucalyptus grandis]
Length = 252
Score = 90.1 bits (222), Expect = 2e-18
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAA 173
VHYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PAA
Sbjct: 125 VHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA 178
>ref|XP_008448384.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]
ref|XP_008448386.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]
ref|XP_008448387.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]
ref|XP_016900540.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]
Length = 237
Score = 89.7 bits (221), Expect = 2e-18
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYTV 191
+HYD+SGRSKG AE +FSRRLDA+ AVK+YNNV+LDG PMKIEI+ TNI++PA G V
Sbjct: 116 IHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAV 175
Query: 192 NFNEVQEG 215
N E G
Sbjct: 176 NPFENSNG 183
>ref|XP_004143092.1| PREDICTED: THO complex subunit 4A-like [Cucumis sativus]
gb|KGN47175.1| hypothetical protein Csa_6G193610 [Cucumis sativus]
Length = 237
Score = 89.7 bits (221), Expect = 2e-18
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYTV 191
+HYD+SGRSKG AE +FSRRLDA+ AVK+YNNV+LDG PMKIEI+ TNI++PA G V
Sbjct: 116 IHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAV 175
Query: 192 NFNEVQEG 215
N E G
Sbjct: 176 NPFENSNG 183
>ref|XP_012838682.1| PREDICTED: THO complex subunit 4A [Erythranthe guttata]
gb|EYU36262.1| hypothetical protein MIMGU_mgv1a012702mg [Erythranthe guttata]
Length = 242
Score = 89.7 bits (221), Expect = 2e-18
Identities = 46/79 (58%), Positives = 55/79 (69%)
Frame = +3
Query: 9 IVHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYT 188
I+HYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIE++ TNI + A L +
Sbjct: 110 IIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIELVGTNITAAAVSLPPS 169
Query: 189 VNFNEVQEGHRAG*HGNAK 245
F E R+G G +
Sbjct: 170 AAFAEPNVAPRSGNSGQGR 188
>ref|XP_008803415.1| PREDICTED: THO complex subunit 4A-like isoform X2 [Phoenix
dactylifera]
Length = 243
Score = 89.7 bits (221), Expect = 2e-18
Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAG-LLYT 188
+HYDRSGRSKG AE +FSRR+DAL AVKRYNNV+LDG PMKIEI+ TNI +PA G + T
Sbjct: 118 IHYDRSGRSKGTAEVVFSRRVDALAAVKRYNNVQLDGKPMKIEIVGTNIETPATGPQIST 177
Query: 189 VNFNEVQEGHRAG 227
F + ++G
Sbjct: 178 RAFGSINGASKSG 190
>gb|PIN11441.1| RRM motif-containing protein [Handroanthus impetiginosus]
Length = 227
Score = 89.4 bits (220), Expect = 3e-18
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAG 176
+HYDRSGRSKG AE +FSRR DAL AVK+YNNV+LDG PMKIEI+ TNI++PAAG
Sbjct: 109 IHYDRSGRSKGTAEVVFSRRQDALAAVKKYNNVQLDGKPMKIEIVGTNISTPAAG 163
>ref|XP_012064998.1| THO complex subunit 4A [Jatropha curcas]
gb|KDP44208.1| hypothetical protein JCGZ_05675 [Jatropha curcas]
Length = 248
Score = 89.7 bits (221), Expect = 3e-18
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAA 173
+HYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PAA
Sbjct: 117 IHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA 170
>gb|PNY06328.1| RNA and export factor-binding protein 2-like [Trifolium pratense]
Length = 155
Score = 87.4 bits (215), Expect = 3e-18
Identities = 45/70 (64%), Positives = 53/70 (75%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYTV 191
VHYDRSGRSKG AE +FSRR DA+ AVKRYNNV+LDG PMKIEI+ TNI++P A +
Sbjct: 17 VHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGAAPVVNA 76
Query: 192 ---NFNEVQE 212
NFN V +
Sbjct: 77 PIGNFNGVPQ 86
>gb|KZV26748.1| THO complex subunit 4A [Dorcoceras hygrometricum]
Length = 233
Score = 89.4 bits (220), Expect = 3e-18
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAGLLYTV 191
+HYDRSGRSKG AE +FSRR DAL A+K+YNN++LDG PMKIE++ TNI++PAA L
Sbjct: 109 IHYDRSGRSKGTAELVFSRRQDALAAIKKYNNIELDGKPMKIELVGTNISTPAASLPAAG 168
Query: 192 NFNEVQEGHRAG 227
F + R+G
Sbjct: 169 GFGDSNAAPRSG 180
>ref|XP_008803414.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Phoenix
dactylifera]
Length = 244
Score = 89.4 bits (220), Expect = 4e-18
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAAG 176
+HYDRSGRSKG AE +FSRR+DAL AVKRYNNV+LDG PMKIEI+ TNI +PA G
Sbjct: 118 IHYDRSGRSKGTAEVVFSRRVDALAAVKRYNNVQLDGKPMKIEIVGTNIETPATG 172
>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 89.4 bits (220), Expect = 4e-18
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAA 173
+HYDRSGRSKG AE +FSRR DAL AVKRYNNV+LDG PMKIEI+ TNIA+PAA
Sbjct: 124 IHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA 177
>ref|XP_022729582.1| THO complex subunit 4A-like [Durio zibethinus]
Length = 241
Score = 89.0 bits (219), Expect = 5e-18
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +3
Query: 12 VHYDRSGRSKGIAEEIFSRRLDALLAVKRYNNVKLDGMPMKIEIMETNIASPAA 173
VHYDRSGRSKG AE +FSRR DA+ AVKRYNNV+LDG PMKIEI+ TN+A+PAA
Sbjct: 117 VHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPAA 170