BLASTX nr result
ID: Acanthopanax24_contig00001624
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax24_contig00001624
(466 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIC33043.1| DNA-directed RNA polymerase IIa [Panax ginseng] 166 5e-50
ref|XP_017249671.1| PREDICTED: DNA-directed RNA polymerases II, ... 166 8e-50
ref|XP_010246465.1| PREDICTED: DNA-directed RNA polymerases II a... 161 3e-48
gb|KVH98719.1| DNA-directed RNA polymerase, 14-18kDa subunit, co... 161 4e-48
ref|XP_022016108.1| DNA-directed RNA polymerases II, IV and V su... 161 5e-48
ref|XP_022034672.1| DNA-directed RNA polymerases II and V subuni... 161 5e-48
ref|XP_023769998.1| DNA-directed RNA polymerases II, IV and V su... 159 3e-47
ref|XP_017241414.1| PREDICTED: DNA-directed RNA polymerases II, ... 159 3e-47
ref|XP_016542524.1| PREDICTED: DNA-directed RNA polymerases II a... 158 6e-47
ref|XP_009620211.1| PREDICTED: DNA-directed RNA polymerases II a... 158 6e-47
ref|XP_023755688.1| DNA-directed RNA polymerases II and V subuni... 158 6e-47
gb|KRY02988.1| DNA-directed RNA polymerases II, IV and V subunit... 156 1e-46
gb|OWM78139.1| hypothetical protein CDL15_Pgr014958 [Punica gran... 157 1e-46
gb|EYU34946.1| hypothetical protein MIMGU_mgv1a015848mg [Erythra... 157 1e-46
ref|XP_010919240.1| PREDICTED: DNA-directed RNA polymerases II, ... 157 2e-46
ref|XP_012840303.1| PREDICTED: DNA-directed RNA polymerases II, ... 157 2e-46
gb|PKA62849.1| hypothetical protein AXF42_Ash019432 [Apostasia s... 156 4e-46
gb|PIN11932.1| RNA polymerase subunit K [Handroanthus impetigino... 156 4e-46
ref|XP_009616945.1| PREDICTED: DNA-directed RNA polymerases II, ... 156 4e-46
ref|XP_020592708.1| DNA-directed RNA polymerases II, IV and V su... 155 6e-46
>gb|AIC33043.1| DNA-directed RNA polymerase IIa [Panax ginseng]
Length = 145
Score = 166 bits (420), Expect = 5e-50
Identities = 85/98 (86%), Positives = 85/98 (86%)
Frame = -1
Query: 295 KEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELEG 116
KEDDVPDPL ERARKTSKYMTKYERARILGTRALQISMNAPVMVELEG
Sbjct: 35 KEDDVPDPLQADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQISMNAPVMVELEG 94
Query: 115 ETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
ETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 95 ETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 132
>ref|XP_017249671.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A
[Daucus carota subsp. sativus]
gb|KZM94932.1| hypothetical protein DCAR_018174 [Daucus carota subsp. sativus]
Length = 145
Score = 166 bits (419), Expect = 8e-50
Identities = 85/99 (85%), Positives = 85/99 (85%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
NKEDDV DPLL ER RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34 NKEDDVADPLLADGEEKQEEEPAERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 93
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 94 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 132
>ref|XP_010246465.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
isoform X1 [Nelumbo nucifera]
ref|XP_010246466.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
isoform X1 [Nelumbo nucifera]
Length = 144
Score = 161 bits (408), Expect = 3e-48
Identities = 81/99 (81%), Positives = 84/99 (84%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
N +DVPDPL+ ER RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 33 NNNEDVPDPLMAETEEKEEQESVERRRKTSKYMTKYERARILGTRALQISMNAPVMVELE 92
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 93 GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 131
>gb|KVH98719.1| DNA-directed RNA polymerase, 14-18kDa subunit, conserved
site-containing protein [Cynara cardunculus var.
scolymus]
Length = 145
Score = 161 bits (408), Expect = 4e-48
Identities = 82/99 (82%), Positives = 85/99 (85%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
NKE+DVPDPL+ E+ RKT KYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34 NKEEDVPDPLVGDNEDKEEPEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 93
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 94 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 132
>ref|XP_022016108.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like
[Helianthus annuus]
gb|OTF93433.1| putative RNA polymerase Rpb6 [Helianthus annuus]
Length = 144
Score = 161 bits (407), Expect = 5e-48
Identities = 81/99 (81%), Positives = 85/99 (85%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
NK+D+ PDPLL ER RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 33 NKDDEAPDPLLGDDEDKEEQEQGERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 92
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELR++KIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 93 GETDPLEIAMKELREKKIPFTIRRYLPDGSYEDWGVDEL 131
>ref|XP_022034672.1| DNA-directed RNA polymerases II and V subunit 6B-like [Helianthus
annuus]
gb|OTG28204.1| putative RNA polymerase Rpb6 [Helianthus annuus]
Length = 145
Score = 161 bits (407), Expect = 5e-48
Identities = 81/99 (81%), Positives = 85/99 (85%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
NK++D+PDPLL E+ RKT KYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34 NKDEDIPDPLLGENEEKEEGEGVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 93
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 94 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 132
>ref|XP_023769998.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Lactuca
sativa]
gb|PLY80739.1| hypothetical protein LSAT_3X64081 [Lactuca sativa]
Length = 145
Score = 159 bits (402), Expect = 3e-47
Identities = 78/99 (78%), Positives = 86/99 (86%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
NK+D++PDPLL +R RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34 NKDDELPDPLLADNEDKEDQEQVDRPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 93
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELR++KIPFTIRR+LPDGSYE+WGVDEL
Sbjct: 94 GETDPLEIAMKELREKKIPFTIRRHLPDGSYEEWGVDEL 132
>ref|XP_017241414.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Daucus carota subsp. sativus]
Length = 146
Score = 159 bits (402), Expect = 3e-47
Identities = 82/100 (82%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXE-RARKTSKYMTKYERARILGTRALQISMNAPVMVEL 122
NK+DD+ DPLL R RKTSKYMTKYERARILGTRALQISMNAPVMVEL
Sbjct: 34 NKDDDIGDPLLADGEDKQGAEEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL 93
Query: 121 EGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
EGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 94 EGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 133
>ref|XP_016542524.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
[Capsicum annuum]
Length = 143
Score = 158 bits (400), Expect = 6e-47
Identities = 80/96 (83%), Positives = 83/96 (86%)
Frame = -1
Query: 289 DDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 110
DD+PDPLL ER RKTSK+MTKYERARILGTRALQISMNAPVMVELEGET
Sbjct: 35 DDIPDPLLGEGAEKTEQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGET 94
Query: 109 DPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
DPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 95 DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 130
>ref|XP_009620211.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
[Nicotiana tomentosiformis]
ref|XP_009763347.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
[Nicotiana sylvestris]
ref|XP_016471800.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
[Nicotiana tabacum]
ref|XP_016490328.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
[Nicotiana tabacum]
ref|XP_019231836.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
isoform X1 [Nicotiana attenuata]
gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum]
gb|OIT28448.1| dna-directed rna polymerases ii, iv and v subunit 6a [Nicotiana
attenuata]
Length = 143
Score = 158 bits (400), Expect = 6e-47
Identities = 80/96 (83%), Positives = 83/96 (86%)
Frame = -1
Query: 289 DDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 110
+D+PDPLL ER RKTSKYMTKYERARILGTRALQISMNAPVMVELEGET
Sbjct: 35 EDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 94
Query: 109 DPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
DPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 95 DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 130
>ref|XP_023755688.1| DNA-directed RNA polymerases II and V subunit 6B-like [Lactuca
sativa]
gb|PLY91535.1| hypothetical protein LSAT_1X9221 [Lactuca sativa]
Length = 145
Score = 158 bits (400), Expect = 6e-47
Identities = 81/97 (83%), Positives = 83/97 (85%)
Frame = -1
Query: 292 EDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELEGE 113
E+DVPDPLL E+ RKT KYMTKYERARILGTRALQISMNAPVMVELEGE
Sbjct: 36 EEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELEGE 95
Query: 112 TDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
TDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 96 TDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 132
>gb|KRY02988.1| DNA-directed RNA polymerases II, IV and V subunit 6A, partial
[Trichinella patagoniensis]
Length = 107
Score = 156 bits (395), Expect = 1e-46
Identities = 80/99 (80%), Positives = 83/99 (83%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
+ DDVPD L+ E+ RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 8 DNNDDVPDDLVGVENEEKDQEPAEKPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 67
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 68 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 106
>gb|OWM78139.1| hypothetical protein CDL15_Pgr014958 [Punica granatum]
gb|PKI45573.1| hypothetical protein CRG98_034091 [Punica granatum]
Length = 144
Score = 157 bits (398), Expect = 1e-46
Identities = 81/99 (81%), Positives = 84/99 (84%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
N DDVPDPLL +R RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34 NNNDDVPDPLL-DAEEKEEQGPVKRERKTSKYMTKYERARILGTRALQISMNAPVMVELE 92
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELR+RKIPFTIRRYLPDGS+EDWGVDEL
Sbjct: 93 GETDPLEIAMKELRERKIPFTIRRYLPDGSFEDWGVDEL 131
>gb|EYU34946.1| hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
Length = 127
Score = 157 bits (396), Expect = 1e-46
Identities = 80/96 (83%), Positives = 82/96 (85%)
Frame = -1
Query: 289 DDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 110
DDVPDP+ ER RKTSKYMTKYERARILGTRALQISMNAPVMVELEGET
Sbjct: 19 DDVPDPIEGDGEEKQEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 78
Query: 109 DPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
DPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 79 DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 114
>ref|XP_010919240.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A
[Elaeis guineensis]
Length = 144
Score = 157 bits (397), Expect = 2e-46
Identities = 80/99 (80%), Positives = 83/99 (83%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
N DDVPD ++ ER RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 33 NNNDDVPDDVVGAEAEEKEQVSVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 92
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 93 GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 131
>ref|XP_012840303.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Erythranthe guttata]
gb|EYU34945.1| hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
Length = 143
Score = 157 bits (396), Expect = 2e-46
Identities = 80/96 (83%), Positives = 82/96 (85%)
Frame = -1
Query: 289 DDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 110
DDVPDP+ ER RKTSKYMTKYERARILGTRALQISMNAPVMVELEGET
Sbjct: 35 DDVPDPIEGDGEEKQEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 94
Query: 109 DPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
DPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 95 DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 130
>gb|PKA62849.1| hypothetical protein AXF42_Ash019432 [Apostasia shenzhenica]
Length = 142
Score = 156 bits (394), Expect = 4e-46
Identities = 78/99 (78%), Positives = 82/99 (82%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
N +DVPD ++ R RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 31 NNNEDVPDDIVGEETEEKEQEQVPRPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 90
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 91 GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 129
>gb|PIN11932.1| RNA polymerase subunit K [Handroanthus impetiginosus]
Length = 142
Score = 156 bits (394), Expect = 4e-46
Identities = 79/99 (79%), Positives = 82/99 (82%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
N +D PDP+ ER RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 31 NNNEDAPDPIEGEGDEKEEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 90
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 91 GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 129
>ref|XP_009616945.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like isoform X1 [Nicotiana tomentosiformis]
ref|XP_016445034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like isoform X1 [Nicotiana tabacum]
Length = 143
Score = 156 bits (394), Expect = 4e-46
Identities = 79/96 (82%), Positives = 83/96 (86%)
Frame = -1
Query: 289 DDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 110
++VPDPLL ER RKTSKYMTKYERARILGTRALQISMNAPVMVELEGET
Sbjct: 35 EEVPDPLLGEGEEKPEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 94
Query: 109 DPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
DPLEIAMKELR++KIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 95 DPLEIAMKELREKKIPFTIRRYLPDGSYEDWGVDEL 130
>ref|XP_020592708.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like
[Phalaenopsis equestris]
Length = 142
Score = 155 bits (393), Expect = 6e-46
Identities = 79/99 (79%), Positives = 83/99 (83%)
Frame = -1
Query: 298 NKEDDVPDPLLVXXXXXXXXXXXERARKTSKYMTKYERARILGTRALQISMNAPVMVELE 119
+ DDVPD ++ E+ RKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 31 DNNDDVPDDIVGVENEEKDQEPVEKPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 90
Query: 118 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 2
GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL
Sbjct: 91 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDEL 129