BLASTX nr result

ID: Acanthopanax24_contig00000368 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax24_contig00000368
         (871 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_079403015.1| hypothetical protein [Vibrio campbellii] >gi...    59   1e-06
gb|ABF48477.1| dehydrin 4 [Panax ginseng]                              59   1e-06
gb|ABF48481.1| dehydrin 8 [Panax ginseng]                              59   1e-06

>ref|WP_079403015.1| hypothetical protein [Vibrio campbellii]
 gb|OPH47454.1| hypothetical protein B4U81_25640 [Vibrio campbellii]
          Length = 218

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 43/87 (49%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
 Frame = -3

Query: 746 IHKEEDTSVPXXXXXXXXXXXXXXK-GFLDKIKEKLPGGDHKK---XXXXXXXXXXXXES 579
           IHKEEDTSVP              K GFLDKIKEKLPGG HKK               ES
Sbjct: 119 IHKEEDTSVPVEKIEETVVVEXEEKKGFLDKIKEKLPGGGHKKAEDQEFPSPAPPAAVES 178

Query: 578 CATVEGEPAXXXXXXXXXXXXXIPGYH 498
            ATVEGEPA             IPGYH
Sbjct: 179 YATVEGEPAKEKKGILEKIKEKIPGYH 205


>gb|ABF48477.1| dehydrin 4 [Panax ginseng]
          Length = 218

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 42/87 (48%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
 Frame = -3

Query: 746 IHKEEDTSVPXXXXXXXXXXXXXXK-GFLDKIKEKLPGGDHKK---XXXXXXXXXXXXES 579
           IHKEEDTSVP              K GFLDKIKEKLPGG HKK               ES
Sbjct: 119 IHKEEDTSVPVEKIEETVVVEQEEKKGFLDKIKEKLPGGGHKKAEDQEFPSPAPPAAVES 178

Query: 578 CATVEGEPAXXXXXXXXXXXXXIPGYH 498
            ATVEGEPA             IPGYH
Sbjct: 179 YATVEGEPAKEKKGILEKIKEKIPGYH 205


>gb|ABF48481.1| dehydrin 8 [Panax ginseng]
          Length = 229

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 42/87 (48%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
 Frame = -3

Query: 746 IHKEEDTSVPXXXXXXXXXXXXXXK-GFLDKIKEKLPGGDHKK---XXXXXXXXXXXXES 579
           IHKEEDTSVP              K GFLDKIKEKLPGG HKK               ES
Sbjct: 119 IHKEEDTSVPVEKIEETVVVEQEEKKGFLDKIKEKLPGGGHKKAEDQEFPSPAPPAAVES 178

Query: 578 CATVEGEPAXXXXXXXXXXXXXIPGYH 498
            ATVEGEPA             IPGYH
Sbjct: 179 YATVEGEPAKEKKGILEKIKEKIPGYH 205


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