BLASTX nr result

ID: Acanthopanax23_contig00022356 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00022356
         (613 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP6...    82   4e-30
gb|PIN21916.1| hypothetical protein CDL12_05370 [Handroanthus im...    82   6e-30
ref|XP_021683306.1| nuclear pore complex protein NUP62-like isof...    81   2e-29
ref|XP_021683307.1| nuclear pore complex protein NUP62-like isof...    81   2e-29
ref|XP_020550604.1| LOW QUALITY PROTEIN: nuclear pore complex pr...    80   1e-28
ref|XP_023899086.1| cell wall protein DAN4-like isoform X1 [Quer...    75   1e-25
gb|POE52496.1| hypothetical protein CFP56_35023 [Quercus suber]        75   1e-25
ref|XP_022870308.1| nuclear pore complex protein NUP62-like [Ole...    71   2e-22
ref|XP_021683308.1| nuclear pore complex protein NUP62-like isof...    61   3e-07

>ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP62 isoform X2
           [Erythranthe guttata]
          Length = 823

 Score = 81.6 bits (200), Expect(2) = 4e-30
 Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
 Frame = -2

Query: 606 SLCSDMNDFTPSSQNSL------IVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHR 445
           S C D      S QN+L      ++KQI+ KYGDIT GSILKS+ AK  FLQLV +VV R
Sbjct: 660 SSCEDSKQLDSSLQNTLSPGRDNLIKQILRKYGDITKGSILKSIEAKKAFLQLVVEVVER 719

Query: 444 LCNHTLDTLGNDEMQLIQ 391
           L +HTLDTLG  EM +IQ
Sbjct: 720 LHSHTLDTLGAHEMHVIQ 737



 Score = 78.2 bits (191), Expect(2) = 4e-30
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = -3

Query: 383 TADAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQMVRKK 204
           T DA  VGFHVDWLQ+R+ ++ +  K++   ++L  + EKI AAK +L E+ELQ M+ KK
Sbjct: 740 TDDAATVGFHVDWLQQRIKKIVSISKYRDSLMQLNDISEKINAAKIALLEMELQHMILKK 799

Query: 203 EVTFLKAEMEGNDFNGPNLGDGLL 132
           E+  +KAEM+  +    NL  GLL
Sbjct: 800 EIDSMKAEMDMEELCVSNLCVGLL 823


>gb|PIN21916.1| hypothetical protein CDL12_05370 [Handroanthus impetiginosus]
          Length = 269

 Score = 81.6 bits (200), Expect(2) = 6e-30
 Identities = 38/83 (45%), Positives = 56/83 (67%)
 Frame = -3

Query: 383 TADAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQMVRKK 204
           T DA AVGFHV+WLQ R+ ++ T  K+Q C + L ++ E++ AAK +L E+ELQQM+ K+
Sbjct: 186 TDDAAAVGFHVEWLQHRIKKIVTISKYQHCLMRLNEISERVNAAKIALWEMELQQMILKE 245

Query: 203 EVTFLKAEMEGNDFNGPNLGDGL 135
           +   +K EM+  D    NL +GL
Sbjct: 246 DADSMKTEMDRQDLCRSNLCEGL 268



 Score = 77.4 bits (189), Expect(2) = 6e-30
 Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
 Frame = -2

Query: 603 LCSDMNDFTPSSQNSL------IVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHRL 442
           LC+D      S QN+L      ++KQI  KYGDIT GSILKS+ AK  FLQLVA+V+  L
Sbjct: 107 LCTDFKQLNLSLQNTLTPKKAHLIKQIFGKYGDITEGSILKSIEAKRAFLQLVAEVLELL 166

Query: 441 CNHTLDTLGNDEMQLIQ 391
             H++DT+G++E+Q+IQ
Sbjct: 167 DTHSVDTIGSNEIQVIQ 183


>ref|XP_021683306.1| nuclear pore complex protein NUP62-like isoform X1 [Hevea
           brasiliensis]
          Length = 815

 Score = 81.3 bits (199), Expect(2) = 2e-29
 Identities = 42/89 (47%), Positives = 58/89 (65%)
 Frame = -3

Query: 398 LYRHRTADAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQ 219
           L   +TADAVAVGF+V+WLQ+RV+EVT A K+     EL++LG++I +AKK L E+E + 
Sbjct: 726 LIESQTADAVAVGFNVEWLQQRVDEVTAASKYHAIQSELDELGQQIQSAKKYLMEMEQRH 785

Query: 218 MVRKKEVTFLKAEMEGNDFNGPNLGDGLL 132
           +    EV  +K   EG       LG+GLL
Sbjct: 786 IALSNEVDAIKTGTEGKSIGYSALGEGLL 814



 Score = 76.3 bits (186), Expect(2) = 2e-29
 Identities = 37/73 (50%), Positives = 55/73 (75%)
 Frame = -2

Query: 606 SLCSDMNDFTPSSQNSLIVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHRLCNHTL 427
           S+  D++ +  S +N  I+K I++KYGDIT GSILKS+AAK T L+LVAD V RL  +T+
Sbjct: 657 SIHDDVDRYVHSPRNRTIIKSILSKYGDITKGSILKSMAAKLTILELVADTVSRLSKNTM 716

Query: 426 DTLGNDEMQLIQT 388
           +TL + E++LI++
Sbjct: 717 ETLSSHELRLIES 729


>ref|XP_021683307.1| nuclear pore complex protein NUP62-like isoform X2 [Hevea
           brasiliensis]
          Length = 809

 Score = 81.3 bits (199), Expect(2) = 2e-29
 Identities = 42/89 (47%), Positives = 58/89 (65%)
 Frame = -3

Query: 398 LYRHRTADAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQ 219
           L   +TADAVAVGF+V+WLQ+RV+EVT A K+     EL++LG++I +AKK L E+E + 
Sbjct: 720 LIESQTADAVAVGFNVEWLQQRVDEVTAASKYHAIQSELDELGQQIQSAKKYLMEMEQRH 779

Query: 218 MVRKKEVTFLKAEMEGNDFNGPNLGDGLL 132
           +    EV  +K   EG       LG+GLL
Sbjct: 780 IALSNEVDAIKTGTEGKSIGYSALGEGLL 808



 Score = 76.3 bits (186), Expect(2) = 2e-29
 Identities = 37/73 (50%), Positives = 55/73 (75%)
 Frame = -2

Query: 606 SLCSDMNDFTPSSQNSLIVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHRLCNHTL 427
           S+  D++ +  S +N  I+K I++KYGDIT GSILKS+AAK T L+LVAD V RL  +T+
Sbjct: 651 SIHDDVDRYVHSPRNRTIIKSILSKYGDITKGSILKSMAAKLTILELVADTVSRLSKNTM 710

Query: 426 DTLGNDEMQLIQT 388
           +TL + E++LI++
Sbjct: 711 ETLSSHELRLIES 723


>ref|XP_020550604.1| LOW QUALITY PROTEIN: nuclear pore complex protein NUP62 [Sesamum
           indicum]
          Length = 1172

 Score = 80.5 bits (197), Expect(2) = 1e-28
 Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
 Frame = -2

Query: 603 LCSDMNDFTPSSQNSL------IVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHRL 442
           LC++        QN+L      ++KQI+ KYGDIT GSILKS+ AK+ FLQLVA+VV RL
Sbjct: 765 LCTECVQLNLCLQNTLCHRKAHLIKQILRKYGDITRGSILKSIEAKAAFLQLVAEVVERL 824

Query: 441 CNHTLDTLGNDEMQLIQ 391
            +HTLDT+G  EMQ++Q
Sbjct: 825 HSHTLDTIGAHEMQVVQ 841



 Score = 73.9 bits (180), Expect(2) = 1e-28
 Identities = 36/82 (43%), Positives = 54/82 (65%)
 Frame = -3

Query: 383  TADAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQMVRKK 204
            T DA AVGFHV+WLQ R+ +V    K++    +L ++ E+I AAK +L E++LQQ++ KK
Sbjct: 844  TDDAAAVGFHVEWLQHRIKKVFAISKYRESLTQLNEIKEQIAAAKIALLEMQLQQIILKK 903

Query: 203  EVTFLKAEMEGNDFNGPNLGDG 138
            E+  +K EM+  D    NL +G
Sbjct: 904  EIDSVKDEMDREDLCRSNLSEG 925


>ref|XP_023899086.1| cell wall protein DAN4-like isoform X1 [Quercus suber]
          Length = 753

 Score = 75.5 bits (184), Expect(2) = 1e-25
 Identities = 39/89 (43%), Positives = 59/89 (66%)
 Frame = -3

Query: 398 LYRHRTADAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQ 219
           L   + AD +A GF+V WL++RV+EV  ++K Q   +ELE+L ++I A KKSL ++E Q+
Sbjct: 665 LIEAKVADVLAAGFNVKWLKQRVDEVIASIKCQEYCMELEELDKRIEATKKSLVDMEQQR 724

Query: 218 MVRKKEVTFLKAEMEGNDFNGPNLGDGLL 132
           +V  +EV  +KA+ E N   G  L +GLL
Sbjct: 725 VVLAREVIAIKAQNERNGILGRTLAEGLL 753



 Score = 69.3 bits (168), Expect(2) = 1e-25
 Identities = 34/72 (47%), Positives = 50/72 (69%)
 Frame = -2

Query: 606 SLCSDMNDFTPSSQNSLIVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHRLCNHTL 427
           SLC +++    S  N  I+K I+ KYGDIT GS  +S+ AK  FL+L+AD V++L N TL
Sbjct: 596 SLCVEVDKHVLSPHNGPIIKSILYKYGDITMGSTFRSMDAKLAFLELMADAVYQLSNLTL 655

Query: 426 DTLGNDEMQLIQ 391
           DT+ + E++LI+
Sbjct: 656 DTVSSHEIELIE 667


>gb|POE52496.1| hypothetical protein CFP56_35023 [Quercus suber]
          Length = 340

 Score = 75.5 bits (184), Expect(2) = 1e-25
 Identities = 39/89 (43%), Positives = 59/89 (66%)
 Frame = -3

Query: 398 LYRHRTADAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQ 219
           L   + AD +A GF+V WL++RV+EV  ++K Q   +ELE+L ++I A KKSL ++E Q+
Sbjct: 252 LIEAKVADVLAAGFNVKWLKQRVDEVIASIKCQEYCMELEELDKRIEATKKSLVDMEQQR 311

Query: 218 MVRKKEVTFLKAEMEGNDFNGPNLGDGLL 132
           +V  +EV  +KA+ E N   G  L +GLL
Sbjct: 312 VVLAREVIAIKAQNERNGILGRTLAEGLL 340



 Score = 69.3 bits (168), Expect(2) = 1e-25
 Identities = 34/72 (47%), Positives = 50/72 (69%)
 Frame = -2

Query: 606 SLCSDMNDFTPSSQNSLIVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHRLCNHTL 427
           SLC +++    S  N  I+K I+ KYGDIT GS  +S+ AK  FL+L+AD V++L N TL
Sbjct: 183 SLCVEVDKHVLSPHNGPIIKSILYKYGDITMGSTFRSMDAKLAFLELMADAVYQLSNLTL 242

Query: 426 DTLGNDEMQLIQ 391
           DT+ + E++LI+
Sbjct: 243 DTVSSHEIELIE 254


>ref|XP_022870308.1| nuclear pore complex protein NUP62-like [Olea europaea var.
           sylvestris]
          Length = 601

 Score = 71.2 bits (173), Expect(2) = 2e-22
 Identities = 35/81 (43%), Positives = 56/81 (69%)
 Frame = -3

Query: 377 DAVAVGFHVDWLQRRVNEVTTALKHQVCTIELEQLGEKIYAAKKSLAELELQQMVRKKEV 198
           DA AVGF V WLQ+R   + T  ++Q   ++L ++GE+I AAK SL  ++L+Q+  K+EV
Sbjct: 520 DAEAVGFKVKWLQQRFKNIVTVSRYQERLMQLNEIGEQISAAKISLRAMKLRQINLKEEV 579

Query: 197 TFLKAEMEGNDFNGPNLGDGL 135
             +K E++G++F+  NL +GL
Sbjct: 580 DTIKVELDGDNFDESNLCEGL 600



 Score = 62.8 bits (151), Expect(2) = 2e-22
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
 Frame = -2

Query: 606 SLCSDMNDFTPSSQNSL------IVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHR 445
           S C+D  D   + QNS       I  QI+ +YGDI+  S LKS+ AK+ F QL+A VV R
Sbjct: 438 SPCADSEDLALALQNSSPAQYAPIFNQILCRYGDISNESKLKSIEAKAAFFQLLAKVVER 497

Query: 444 LCNHTLDTLGNDEMQLIQ 391
           L NHT+ +L + E+Q +Q
Sbjct: 498 LSNHTVKSLDSGELQRMQ 515


>ref|XP_021683308.1| nuclear pore complex protein NUP62-like isoform X3 [Hevea
           brasiliensis]
          Length = 752

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = -2

Query: 606 SLCSDMNDFTPSSQNSLIVKQIITKYGDITTGSILKSVAAKSTFLQLVADVVHRLCNHTL 427
           S+  D++ +  S +N  I+K I++KYGDIT GSILKS+AAK T L+LVAD +  L     
Sbjct: 657 SIHDDVDRYVHSPRNRTIIKSILSKYGDITKGSILKSMAAKLTILELVADTMLLLLVSMW 716

Query: 426 DTLGNDEMQLIQTPN-S*CSSSWVS 355
           +    + M+  Q PN    S SW++
Sbjct: 717 NGCNKELMKSQQLPNIMPFSQSWMN 741


Top