BLASTX nr result

ID: Acanthopanax23_contig00022309 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00022309
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011463030.1| PREDICTED: mediator-associated protein 1-lik...    57   2e-06
ref|XP_008353581.1| PREDICTED: mediator-associated protein 1-lik...    57   3e-06
gb|PHU12004.1| hypothetical protein BC332_18934 [Capsicum chinense]    55   9e-06

>ref|XP_011463030.1| PREDICTED: mediator-associated protein 1-like [Fragaria vesca
           subsp. vesca]
          Length = 392

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 19/116 (16%)
 Frame = +1

Query: 232 EFEDDGLKEVVHQKKPKSTPESESNDGSFSQSDEIP-----VDFIVK--TSTPMSN--LR 384
           E EDD  + V   KKP+S  ES S+ GS ++SD +       DF VK   S PM++   +
Sbjct: 53  EEEDDDEENVTANKKPQS--ESASDAGSETESDAMTHSPTASDFTVKPIVSKPMNDSPAK 110

Query: 385 PSSKRKLPGEENSRR-------KKSKVVSNG---DEEKRRAATVWSEDDEIALLKG 522
           P+ K   P +  +         KK K  SNG   DEE ++A  +W EDDEIA+L+G
Sbjct: 111 PTRKTAAPAKRAAESDPNPKDSKKKKKGSNGSGEDEETKKAGRLWGEDDEIAILEG 166


>ref|XP_008353581.1| PREDICTED: mediator-associated protein 1-like [Malus domestica]
          Length = 379

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 20/120 (16%)
 Frame = +1

Query: 223 KVGEFEDDGLKEVVHQKK-------PKSTPESESNDGSFSQSDEI--PV------DFIV- 354
           K  +  DD L+E   +++       PKS P+SES++ S S SD    P+      D +V 
Sbjct: 42  KYVDLNDDELEEEDEEEEGRPSAAVPKSNPQSESDNNSPSASDFTVKPIVSKPANDAVVP 101

Query: 355 --KTSTPMSNLRPSSKRKLPGEE--NSRRKKSKVVSNGDEEKRRAATVWSEDDEIALLKG 522
             KT++      P+S  K P E   N +  K K V   DEE ++   +WSEDDEI +LKG
Sbjct: 102 SKKTASAKXAAAPNSGSKRPAETEPNPKNSKKKKVGVDDEELKKGQRLWSEDDEITILKG 161


>gb|PHU12004.1| hypothetical protein BC332_18934 [Capsicum chinense]
          Length = 404

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 28/123 (22%)
 Frame = +1

Query: 238 EDDGLKEVVHQKKPKSTPE---------SESNDGSFSQSDE---IPV----DFIVKTSTP 369
           ED+  K+ + QK  ++ P+         +E+  GS SQ+D    +P     DF VK S P
Sbjct: 51  EDEPPKKPITQKSLQTQPKPVHSSSESGTENGSGSESQTDSGQSLPSPSASDFTVKPSVP 110

Query: 370 MSNLRPS---SKRKLPGEE------NSRRKKSKVVSNGDEEKRRAAT---VWSEDDEIAL 513
           +    PS   +KR  P E+      +SR+KK K+    +EEK+ +AT   +WSEDD++A+
Sbjct: 111 VKTAVPSKEPAKRPPPQEQAQKESKDSRKKKPKIAE--EEEKKASATPRSLWSEDDQVAI 168

Query: 514 LKG 522
           LKG
Sbjct: 169 LKG 171


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