BLASTX nr result

ID: Acanthopanax23_contig00021956 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00021956
         (634 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017218701.1| PREDICTED: uncharacterized protein LOC108196...    79   1e-13
ref|WP_016252705.1| hypothetical protein [Enterococcus sulfureus...    58   4e-06

>ref|XP_017218701.1| PREDICTED: uncharacterized protein LOC108196103 [Daucus carota
           subsp. sativus]
 gb|KZM88574.1| hypothetical protein DCAR_025649 [Daucus carota subsp. sativus]
          Length = 594

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 57/158 (36%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
 Frame = +2

Query: 128 NVSTGVSTSQ-TIHCESTMGVDVNKLSEGLSPRSKNRSKTLSNNQKVGGLYSKTSTKPVS 304
           +VS G + +  T+H +S M  DV  LS+ +  R+K R +TL++ Q+ G L S T+T P +
Sbjct: 308 DVSMGTTNNLLTVHSQSKMDEDVRALSKFVPTRNKTRLETLTSQQQEG-LPSNTTTNPDT 366

Query: 305 MSEASGNQCGGTRAETNVSNVSRSAILSEENNEVAKILDSSGVGRSSRPKHLGGGVATIR 484
            S  S  Q   T   T+V++VS+SAI +  N +V ++LDSS     +   HLG   +  R
Sbjct: 367 TSRTSTRQYADTTV-THVASVSQSAIPNAANIKVDRVLDSSSSKNCTTCNHLGKNDSAKR 425

Query: 485 ESRLEISINKQEENLSSTTFGNPELSAQFSASEVSENQ 598
            +  E+ +N QE NL + T  +P ++A   A E+S N+
Sbjct: 426 GTMSEMLMNSQELNLFAATL-DPGVTAPIPAPEMSRNR 462


>ref|WP_016252705.1| hypothetical protein [Enterococcus sulfureus]
 gb|EOT83789.1| hypothetical protein I573_01514 [Enterococcus sulfureus ATCC 49903]
          Length = 2475

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 1/211 (0%)
 Frame = +2

Query: 5    TRSKKRSKALRNNEGRFTKT-VSTSEAVGSQCGGTIAEKNASNVSTGVSTSQTIHCESTM 181
            + S   S +   +E   + T  S SE+  +    + +E N S+ ST  S S T    ST 
Sbjct: 2021 SESNTSSTSTSESESNTSSTSTSVSESNTTSASTSTSESNTSSTSTSASESNTAST-STS 2079

Query: 182  GVDVNKLSEGLSPRSKNRSKTLSNNQKVGGLYSKTSTKPVSMSEASGNQCGGTRAETNVS 361
              + N  S   S    N + T ++  +     S TS+   S SE++      + +E+N S
Sbjct: 2080 ASESNTTSTSTSGSESNTASTSTSASE-----SNTSSTSTSASESTTTSASTSASESNTS 2134

Query: 362  NVSRSAILSEENNEVAKILDSSGVGRSSRPKHLGGGVATIRESRLEISINKQEENLSSTT 541
            + S SA  SE N       DS     S+         +T   +    S +  E N SST+
Sbjct: 2135 STSTSA--SESNTASTSTSDSESNTTST-------STSTSESTTASASTSASESNTSSTS 2185

Query: 542  FGNPELSAQFSASEVSENQCGGTITNTNASN 634
                E +   +++ VSE+      T+T+ SN
Sbjct: 2186 TSASESNTSSTSTSVSESNTTSASTSTSESN 2216


Top