BLASTX nr result

ID: Acanthopanax23_contig00021705 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00021705
         (737 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65350.1| hypothetical protein VITISV_000640 [Vitis vinifera]    73   4e-11
ref|XP_010661316.1| PREDICTED: uncharacterized protein LOC104881...    73   4e-11
ref|XP_015889413.1| PREDICTED: mediator of RNA polymerase II tra...    58   6e-06

>emb|CAN65350.1| hypothetical protein VITISV_000640 [Vitis vinifera]
          Length = 628

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 26/104 (25%)
 Frame = -1

Query: 632 NYQHQQVPSQTEPTLIHPPGVPIPPESAHLVAPEPTHHQNQLNSYYP---------QQQQ 480
           +YQ+QQ     +PT IHPPGVPIPPE  H V P+  H Q   N+YYP         QQQQ
Sbjct: 57  DYQNQQ-----QPTSIHPPGVPIPPEPTHTVGPDYAHLQAPHNAYYPQGVHEQQQQQQQQ 111

Query: 479 VTPY-------------AGNVDSSQ----QWQGSYGGFGAAPLQ 399
              Y             AGN+DS+Q    QWQ + GGFG  P++
Sbjct: 112 HMGYPDSAQAGSNLFQMAGNMDSAQGSAEQWQVNNGGFGPGPVR 155


>ref|XP_010661316.1| PREDICTED: uncharacterized protein LOC104881792 [Vitis vinifera]
          Length = 628

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 26/104 (25%)
 Frame = -1

Query: 632 NYQHQQVPSQTEPTLIHPPGVPIPPESAHLVAPEPTHHQNQLNSYYP---------QQQQ 480
           +YQ+QQ     +PT IHPPGVPIPPE  H V P+  H Q   N+YYP         QQQQ
Sbjct: 57  DYQNQQ-----QPTSIHPPGVPIPPEPTHTVGPDYAHLQAPHNAYYPQGVHEQQQQQQQQ 111

Query: 479 VTPY-------------AGNVDSSQ----QWQGSYGGFGAAPLQ 399
              Y             AGN+DS+Q    QWQ + GGFG  P++
Sbjct: 112 HMGYPDSAQAGSNLFQMAGNMDSAQGSAEQWQVNNGGFGPGPVR 155


>ref|XP_015889413.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Ziziphus jujuba]
          Length = 655

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 35/78 (44%), Positives = 38/78 (48%)
 Frame = -1

Query: 626 QHQQVPSQTEPTLIHPPGVPIPPESAHLVAPEPTHHQNQLNSYYPQQQQVTPYAGNVDSS 447
           Q  Q     EPT IHPPGVPIPP S+    P  TH Q Q N+YYP         G V+S 
Sbjct: 74  QQSQQQFHQEPTSIHPPGVPIPPASSQSAEPAQTHLQRQQNAYYPH--------GAVESR 125

Query: 446 QQWQGSYGGFGAAPLQGG 393
           QQ   S  G   A   GG
Sbjct: 126 QQ---SVPGSDVAGTTGG 140


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