BLASTX nr result

ID: Acanthopanax23_contig00021611 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00021611
         (477 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM90651.1| hypothetical protein DCAR_021984 [Daucus carota s...    62   2e-09
emb|CAN71531.1| hypothetical protein VITISV_023494 [Vitis vinifera]    57   7e-08
gb|PIA62128.1| hypothetical protein AQUCO_00200256v1 [Aquilegia ...    53   4e-06

>gb|KZM90651.1| hypothetical protein DCAR_021984 [Daucus carota subsp. sativus]
          Length = 99

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
 Frame = -2

Query: 473 RIQYFTIIYFXXXXXXLSSKPSGTEARRPFNMMSPSS-----------SFGAMKVSGPSH 327
           ++ Y TI +        S  P+ T A RP    + +S           S   +K SGPS 
Sbjct: 5   KVTYVTITFLLFSLLLCSKAPT-TRASRPLPEKTRTSYMEDFLRGHGFSVDEVKSSGPSS 63

Query: 326 RGDGHMRHKEDLTALRNFKNSGPRPGEGHKYVAGNHH 216
           RG GHM+ K  L +LR  K+SGP PG GHK +AG+HH
Sbjct: 64  RGAGHMKVK-GLPSLRTLKDSGPSPGAGHKSIAGDHH 99


>emb|CAN71531.1| hypothetical protein VITISV_023494 [Vitis vinifera]
          Length = 98

 Score = 57.4 bits (137), Expect = 7e-08
 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = -2

Query: 362 SFGAMKVSGPSHRGDGH-MRHKEDLTALRNFKNSGPRPGEGHKYVAGNHH 216
           S GA+K SGPS+RG GH +     L  L   K+SGP PGEGHKY+ GNHH
Sbjct: 51  SIGAIKHSGPSYRGGGHSLIRLGKLKVL--MKDSGPSPGEGHKYITGNHH 98


>gb|PIA62128.1| hypothetical protein AQUCO_00200256v1 [Aquilegia coerulea]
          Length = 94

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 25/56 (44%), Positives = 31/56 (55%)
 Frame = -2

Query: 386 FNMMSPSSSFGAMKVSGPSHRGDGHMRHKEDLTALRNFKNSGPRPGEGHKYVAGNH 219
           +N      S G MK SGPS  G GH  +  D   +   KNSGP PG+GH ++ GNH
Sbjct: 40  YNFSKKYLSLGVMKKSGPSPGGKGHRLYVID--GIGGMKNSGPSPGKGHSFITGNH 93


Top