BLASTX nr result
ID: Acanthopanax23_contig00021449
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00021449
(423 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK49064.1| unknown [Lotus japonicus] 197 1e-62
gb|PLY90520.1| hypothetical protein LSAT_2X20640 [Lactuca sativa] 194 1e-61
emb|CAA30522.1| ORF 143 (chloroplast) [Glycine max] >gi|73440260... 157 2e-57
ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococ... 147 6e-43
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 134 2e-38
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 121 2e-33
ref|XP_017225397.1| PREDICTED: CASP-like protein 1D1 [Daucus car... 117 6e-30
gb|OAY85602.1| 30S ribosomal protein S12, chloroplastic [Ananas ... 109 8e-30
gb|KQJ97119.1| hypothetical protein BRADI_3g28913v3 [Brachypodiu... 109 2e-28
gb|EEF42577.1| conserved hypothetical protein [Ricinus communis] 102 1e-23
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 96 2e-23
gb|EFH70943.1| hypothetical protein ARALYDRAFT_892903 [Arabidops... 82 7e-18
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 79 8e-16
gb|AFS35523.1| ribosomal protein S12, partial (plastid) [Fragari... 75 2e-15
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 75 4e-15
ref|YP_001152253.1| ORF40x [Pinus koraiensis] >gi|145048878|gb|A... 72 4e-14
gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max] 72 1e-13
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re... 70 3e-13
gb|OAY32019.1| hypothetical protein MANES_14G160100, partial [Ma... 67 3e-12
ref|XP_019246421.1| PREDICTED: ATP synthase subunit alpha, chlor... 69 7e-12
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 197 bits (500), Expect = 1e-62
Identities = 104/129 (80%), Positives = 109/129 (84%)
Frame = -3
Query: 388 IICPRFNIEIISEGFPDFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHYFGNPRTQSYGY 209
+ICPR NIE ISE F DFVRVNKQFE+PRLF R + LHYF N RTQSYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 208 VKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRS 29
VKYRISNPS+KRRETDTQF+VSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRS
Sbjct: 59 VKYRISNPSKKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRS 118
Query: 28 TLQYGVKKP 2
TLQYG KKP
Sbjct: 119 TLQYGAKKP 127
>gb|PLY90520.1| hypothetical protein LSAT_2X20640 [Lactuca sativa]
Length = 124
Score = 194 bits (493), Expect = 1e-61
Identities = 95/96 (98%), Positives = 95/96 (98%)
Frame = -3
Query: 289 RSESNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDT 110
RSESNSND KHFFLHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDT
Sbjct: 28 RSESNSNDLKHFFLHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDT 87
Query: 109 YRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 2
YRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 88 YRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 123
>emb|CAA30522.1| ORF 143 (chloroplast) [Glycine max]
gb|KHN32086.1| Putative 8.8 kDa protein in rps12-tRNA-Val intergenic region
[Glycine soja]
Length = 143
Score = 157 bits (398), Expect(2) = 2e-57
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = -3
Query: 250 LHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILRKAVFDESR 71
LHYFGNPRTQSYGYVKYRISNPSRKR TDTQF+VSKQNSILD+IDTYRIL KAVFDESR
Sbjct: 60 LHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDESR 119
Query: 70 MYGLEGDLSYLSRSTLQYGVKKP 2
MYGLEGDLSYLSRSTLQYG KKP
Sbjct: 120 MYGLEGDLSYLSRSTLQYGAKKP 142
Score = 93.2 bits (230), Expect(2) = 2e-57
Identities = 49/59 (83%), Positives = 50/59 (84%)
Frame = -1
Query: 423 KIFFLKRFDSELLYVQGSILK*FQRVSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY 247
KIFFLK+FDSEL YVQG I K FQR SLTLSVSTNNSK LDFFR GPSQIAMIRST Y
Sbjct: 4 KIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTLHY 62
>ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
ref|YP_009145127.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
gb|AKJ85882.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
gb|AKJ85883.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
Length = 121
Score = 147 bits (370), Expect = 6e-43
Identities = 73/77 (94%), Positives = 74/77 (96%)
Frame = -3
Query: 232 PRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEG 53
P + SYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRIL KAVFDESRMYGLEG
Sbjct: 44 PNSASYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEG 103
Query: 52 DLSYLSRSTLQYGVKKP 2
DLSYLSRSTLQYGVKKP
Sbjct: 104 DLSYLSRSTLQYGVKKP 120
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
ref|NP_862814.1| hypothetical protein CafeCp092 [Calycanthus floridus var. glaucus]
sp|Q7Y618.1|YCX1_CALFG RecName: Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region (chloroplast) [Calycanthus floridus
var. glaucus]
emb|CAD28768.1| hypothetical protein (chloroplast) [Calycanthus floridus var.
glaucus]
emb|CAD28782.1| hypothetical protein (chloroplast) [Calycanthus floridus var.
glaucus]
Length = 75
Score = 134 bits (337), Expect = 2e-38
Identities = 69/72 (95%), Positives = 69/72 (95%)
Frame = -1
Query: 423 KIFFLKRFDSELLYVQGSILK*FQRVSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYT 244
KIFFLKRFDSELLYVQGSILK FQR SLTLSVSTNNSKYLDFFRTGPSQIA IRSTSFYT
Sbjct: 4 KIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTSFYT 63
Query: 243 ISETQGLNRMDM 208
ISETQGLNRMDM
Sbjct: 64 ISETQGLNRMDM 75
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
ref|YP_001109569.1| hypothetical protein Poptr_cp092 [Populus trichocarpa]
gb|ABO36754.1| conserved hypothetical protein (chloroplast) [Populus trichocarpa]
gb|ABO36773.1| conserved hypothetical protein (chloroplast) [Populus trichocarpa]
Length = 65
Score = 121 bits (303), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = -1
Query: 342 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNRMDM*NTGFPILAGKGGKR 163
+TLSVSTNNSK LDFFR GPSQIAMIRSTSFYTISETQGLNRMDM NTGFPILAGKGGKR
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGGKR 60
Query: 162 ILNLK 148
ILNLK
Sbjct: 61 ILNLK 65
>ref|XP_017225397.1| PREDICTED: CASP-like protein 1D1 [Daucus carota subsp. sativus]
Length = 232
Score = 117 bits (293), Expect = 6e-30
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = +2
Query: 65 VHTTFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRLSPWVSEI 244
VHTTFIEYGF QNSICIYEIEYGILFTHFKLSIRFPPFPARI NPVFYISIR SP VS+I
Sbjct: 172 VHTTFIEYGFVQNSICIYEIEYGILFTHFKLSIRFPPFPARIENPVFYISIRFSPCVSQI 231
Query: 245 V 247
V
Sbjct: 232 V 232
>gb|OAY85602.1| 30S ribosomal protein S12, chloroplastic [Ananas comosus]
Length = 182
Score = 109 bits (273), Expect(2) = 8e-30
Identities = 56/59 (94%), Positives = 56/59 (94%)
Frame = -1
Query: 423 KIFFLKRFDSELLYVQGSILK*FQRVSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY 247
KIFFLKRFDSELLYVQG ILK FQR SLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY
Sbjct: 102 KIFFLKRFDSELLYVQGPILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY 160
Score = 48.5 bits (114), Expect(2) = 8e-30
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -2
Query: 248 TLFRKPKDSIVWICKIQDFQS 186
TLFRKPKDSIVWICKIQDFQS
Sbjct: 162 TLFRKPKDSIVWICKIQDFQS 182
>gb|KQJ97119.1| hypothetical protein BRADI_3g28913v3 [Brachypodium distachyon]
Length = 84
Score = 109 bits (272), Expect = 2e-28
Identities = 65/92 (70%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Frame = -1
Query: 423 KIFFLKRFDSELLYVQGSILK*FQRVSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSF-- 250
KI FLKRFDSELLY R SLTLSVSTNNSKYLDFFRTGPS +AMIRSTSF
Sbjct: 4 KILFLKRFDSELLY----------RFSLTLSVSTNNSKYLDFFRTGPS-LAMIRSTSFSI 52
Query: 249 YTISETQGLNRMDM*NTGFPILAGKGGKRILN 154
I +++ +RMDM NTGF ILAGKGGKRILN
Sbjct: 53 TLIRKSKDSDRMDMENTGFSILAGKGGKRILN 84
>gb|EEF42577.1| conserved hypothetical protein [Ricinus communis]
Length = 286
Score = 102 bits (254), Expect = 1e-23
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = +2
Query: 83 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRLSPWVSEIV 247
EYGF QNSICIYEIEYGILFTHFKLSI PPFPARIGNPVFYISIRLSP VS+IV
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana]
gb|AAW82567.1| hypothetical protein (chloroplast) [Phalaenopsis aphrodite subsp.
formosana]
Length = 77
Score = 96.3 bits (238), Expect = 2e-23
Identities = 49/56 (87%), Positives = 50/56 (89%)
Frame = +2
Query: 251 KEVLRIIAI*LGPVLKKSRYFELFVDTDKVRETL*NYFNIEPWTYNSSESNLFRKK 418
KEVLRIIAI LGPVLKKSRYFELFVDTDK RE L NY NI PWTY+SSESNLFRKK
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKK 58
>gb|EFH70943.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata]
Length = 60
Score = 81.6 bits (200), Expect = 7e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1
Query: 342 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNRMDM 208
+TLSVSTNNSK LDFFRT PSQIAMIRST FYTISETQGLNRMDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
emb|CDL78835.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 79.0 bits (193), Expect = 8e-16
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = -3
Query: 121 LIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 2
+IDTYRILRKAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155
>gb|AFS35523.1| ribosomal protein S12, partial (plastid) [Fragaria moschata]
Length = 40
Score = 74.7 bits (182), Expect = 2e-15
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = -3
Query: 118 IDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 2
IDTY IL KAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
ref|YP_001312284.1| hypothetical protein CYtaCp120 [Cycas taitungensis]
dbj|BAF64995.1| hypothetical protein (chloroplast) [Cycas taitungensis]
dbj|BAF65026.1| hypothetical protein (chloroplast) [Cycas taitungensis]
Length = 64
Score = 74.7 bits (182), Expect = 4e-15
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 FPSFSC*DWKSCILHIHTIESLGFRNSVKR-SASNHCYLTRTCSKKVEVF 312
F FSC DWKS ILHI TI+SLG + SVK+ S SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64
>ref|YP_001152253.1| ORF40x [Pinus koraiensis]
gb|ABP35493.1| ORF40x (chloroplast) [Pinus koraiensis]
Length = 40
Score = 71.6 bits (174), Expect = 4e-14
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -1
Query: 114 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNME*KSQ 1
+ IE CGKPYS KVVCT WREIFH FRDPPYNME KSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38
>gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max]
Length = 87
Score = 71.6 bits (174), Expect = 1e-13
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = -1
Query: 423 KIFFLKRFDSELLYVQGSILK*FQRVSLTLSVSTNNSKYLDFFRTGPS 280
KIFFLK+FDSEL YVQG I K FQR S TLSVSTNNSK LDFFR G S
Sbjct: 4 KIFFLKKFDSELRYVQGPIWKEFQRFSWTLSVSTNNSKCLDFFRIGLS 51
>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
ref|YP_009308177.1| hypothetical protein (chloroplast) [Cycas panzhihuaensis]
gb|AEX99157.1| hypothetical_protein (chloroplast) [Cycas revoluta]
gb|AOS53126.1| hypothetical protein (chloroplast) [Cycas panzhihuaensis]
Length = 60
Score = 69.7 bits (169), Expect(2) = 3e-13
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +1
Query: 166 FPSFSC*DWKSCILHIHTIESLGFRNSVKRSASNHCYLTRTCSKKVEVF 312
F FSC DWKS ILHI TI+SLG + SV SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKVEVF 60
Score = 33.1 bits (74), Expect(2) = 3e-13
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 128 YGILFTHFKLSIRFPPF 178
Y ILFTHFKLSIRF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>gb|OAY32019.1| hypothetical protein MANES_14G160100, partial [Manihot esculenta]
Length = 48
Score = 67.0 bits (162), Expect = 3e-12
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 351 RVSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNRMDM 208
R LSVS NNSK L+FFRT PSQIA+IR++SFYTIS+ Q LNRMDM
Sbjct: 1 RFFFILSVSINNSKCLNFFRTSPSQIAIIRNSSFYTISKIQELNRMDM 48
>ref|XP_019246421.1| PREDICTED: ATP synthase subunit alpha, chloroplastic-like
[Nicotiana attenuata]
Length = 177
Score = 69.3 bits (168), Expect = 7e-12
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +1
Query: 199 CILHIHTIESLGFRNSVKRSASNHCYLTRTCSKK 300
CILHIHTIESLGFRNSVKRSASNHCYLTRT KK
Sbjct: 61 CILHIHTIESLGFRNSVKRSASNHCYLTRTVLKK 94