BLASTX nr result
ID: Acanthopanax23_contig00021446
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00021446
(605 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_075208790.1| RNA polymerase factor sigma-32 [Escherichia ... 369 e-128
ref|WP_105453152.1| RNA polymerase factor sigma-32, partial [Esc... 369 e-128
ref|WP_044081983.1| RNA polymerase sigma factor RpoH, partial [E... 369 e-128
gb|EFQ00856.1| alternative sigma factor RpoH [Escherichia coli 1... 369 e-127
gb|EFP72378.1| alternative sigma factor RpoH [Shigella dysenteri... 369 e-127
gb|ERF98731.1| RNA polymerase factor sigma-32 [Salmonella enteri... 366 e-127
ref|WP_080109661.1| RNA polymerase sigma factor RpoH, partial [S... 366 e-127
gb|EHV52977.1| alternative sigma factor RpoH [Escherichia coli D... 369 e-127
ref|WP_105272821.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_104213647.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_100009083.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_097752711.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_097741236.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_097556592.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_095526231.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_095512791.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_089623904.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_089621137.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_089565649.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
ref|WP_089519799.1| RNA polymerase sigma factor RpoH [Escherichi... 369 e-127
>ref|WP_075208790.1| RNA polymerase factor sigma-32 [Escherichia coli]
gb|PGF57461.1| RNA polymerase factor sigma-32, partial [Escherichia coli]
Length = 198
Score = 369 bits (946), Expect = e-128
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 4 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 63
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 64 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 123
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 124 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 183
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 184 LEKNAMKKLRAAIEA 198
>ref|WP_105453152.1| RNA polymerase factor sigma-32, partial [Escherichia coli]
gb|PND97499.1| RNA polymerase sigma factor RpoH, partial [Escherichia coli]
gb|PQV18370.1| RNA polymerase sigma factor RpoH, partial [Escherichia coli]
Length = 204
Score = 369 bits (946), Expect = e-128
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 10 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 69
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 70 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 129
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 130 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 189
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 190 LEKNAMKKLRAAIEA 204
>ref|WP_044081983.1| RNA polymerase sigma factor RpoH, partial [Escherichia coli]
gb|KEN91984.1| alternative sigma factor RpoH, partial [Escherichia coli
1-392-07_S4_C1]
Length = 214
Score = 369 bits (946), Expect = e-128
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 20 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 79
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 80 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 139
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 140 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 199
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 200 LEKNAMKKLRAAIEA 214
>gb|EFQ00856.1| alternative sigma factor RpoH [Escherichia coli 1827-70]
Length = 257
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 63 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 122
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 123 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSNDDSDSQPMAPVLYLQDKSSNFA 182
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 183 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 242
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 243 LEKNAMKKLRAAIEA 257
>gb|EFP72378.1| alternative sigma factor RpoH [Shigella dysenteriae 1617]
gb|EFU95370.1| alternative sigma factor RpoH [Escherichia coli 3431]
gb|EFZ48540.1| alternative sigma factor RpoH [Escherichia coli E128010]
gb|EFZ50582.1| alternative sigma factor RpoH [Shigella sonnei 53G]
gb|EFZ64586.1| alternative sigma factor RpoH [Escherichia coli OK1180]
gb|EFZ68327.1| alternative sigma factor RpoH [Escherichia coli OK1357]
gb|EFZ74232.1| alternative sigma factor RpoH [Escherichia coli RN587/1]
gb|EGE62790.1| alternative sigma factor RpoH [Escherichia coli STEC_7v]
gb|EGW65896.1| alternative sigma factor RpoH [Escherichia coli 2534-86]
gb|EGW81728.1| alternative sigma factor RpoH [Escherichia coli 3030-1]
gb|EGW91629.1| alternative sigma factor RpoH [Escherichia coli STEC_EH250]
gb|EGX02110.1| alternative sigma factor RpoH [Escherichia coli STEC_MHI813]
gb|EGX03138.1| alternative sigma factor RpoH [Escherichia coli G58-1]
gb|EHV21573.1| alternative sigma factor RpoH [Escherichia coli DEC5A]
gb|EHV56748.1| alternative sigma factor RpoH [Escherichia coli DEC6C]
gb|EHW59383.1| alternative sigma factor RpoH [Escherichia coli DEC10A]
gb|EHX27660.1| alternative sigma factor RpoH [Escherichia coli DEC12C]
gb|EHX85003.1| alternative sigma factor RpoH [Escherichia coli DEC14C]
gb|EHY00577.1| alternative sigma factor RpoH [Escherichia coli DEC15B]
gb|EHY04231.1| alternative sigma factor RpoH [Escherichia coli DEC15C]
gb|EID68323.1| RNA polymerase factor sigma-32 [Escherichia coli W26]
gb|EIE55604.1| RNA polymerase factor sigma-32 [Escherichia coli AI27]
gb|EIN35469.1| alternative sigma factor RpoH [Escherichia coli 93-001]
gb|EIN38633.1| alternative sigma factor RpoH [Escherichia coli FRIK1990]
gb|EIN51253.1| alternative sigma factor RpoH [Escherichia coli PA3]
gb|EIN67917.1| alternative sigma factor RpoH [Escherichia coli PA10]
gb|EIO25874.1| alternative sigma factor RpoH [Escherichia coli PA40]
gb|EIO33465.1| alternative sigma factor RpoH [Escherichia coli PA41]
gb|EIO55520.1| alternative sigma factor RpoH [Escherichia coli TW10246]
gb|EIO71771.1| alternative sigma factor RpoH [Escherichia coli TW09109]
gb|EIP21310.1| alternative sigma factor RpoH [Escherichia coli EC4422]
gb|EIP25464.1| alternative sigma factor RpoH [Escherichia coli EC4013]
gb|EIP36787.1| alternative sigma factor RpoH [Escherichia coli EC4439]
gb|EIP52721.1| alternative sigma factor RpoH [Escherichia coli EC4448]
gb|EIP75072.1| alternative sigma factor RpoH [Escherichia coli EC1863]
gb|EIQ16645.1| alternative sigma factor RpoH [Shigella flexneri K-315]
gb|EIQ25136.1| alternative sigma factor RpoH [Shigella boydii 965-58]
gb|EIQ68060.1| alternative sigma factor RpoH [Escherichia coli EPEC C342-62]
gb|EKH01852.1| alternative sigma factor RpoH [Escherichia coli PA34]
gb|EKH22447.1| alternative sigma factor RpoH [Escherichia coli FDA504]
gb|EKH34064.1| alternative sigma factor RpoH [Escherichia coli FRIK1997]
gb|EKH50455.1| alternative sigma factor RpoH [Escherichia coli FRIK2001]
gb|EKH98286.1| alternative sigma factor RpoH [Escherichia coli CB7326]
gb|EKI16495.1| alternative sigma factor RpoH [Escherichia coli TW15901]
gb|EKI34718.1| alternative sigma factor RpoH [Escherichia coli 3006]
gb|EKI35757.1| alternative sigma factor RpoH [Escherichia coli 07798]
gb|EKI62359.1| alternative sigma factor RpoH [Escherichia coli EC1737]
gb|EKI84340.1| alternative sigma factor RpoH [Escherichia coli EC1849]
gb|EKJ08030.1| alternative sigma factor RpoH [Escherichia coli EC1864]
gb|EKJ12654.1| alternative sigma factor RpoH [Escherichia coli EC1865]
gb|EKJ22418.1| alternative sigma factor RpoH [Escherichia coli EC1868]
gb|EKJ58281.1| alternative sigma factor RpoH [Escherichia coli 0.1304]
gb|EKK23993.1| alternative sigma factor RpoH [Escherichia coli 3.4870]
gb|EKK41873.1| alternative sigma factor RpoH [Escherichia coli 8.0569]
gb|EKK68636.1| alternative sigma factor RpoH [Escherichia coli 88.0221]
gb|EKW06746.1| alternative sigma factor RpoH [Escherichia coli 93.0056]
gb|EKW78702.1| alternative sigma factor RpoH [Escherichia coli 99.0672]
gb|ELV37593.1| alternative sigma factor RpoH [Escherichia coli 99.0848]
gb|ELV65810.1| alternative sigma factor RpoH [Escherichia coli ATCC 700728]
gb|ELW33098.1| alternative sigma factor RpoH [Escherichia coli 95.0083]
gb|EMV53496.1| alternative sigma factor RpoH [Escherichia coli 2871950]
gb|EMX47802.1| alternative sigma factor RpoH [Escherichia coli Jurua 20/10]
gb|EMZ64285.1| alternative sigma factor RpoH [Escherichia coli 2846750]
gb|ENA77861.1| alternative sigma factor RpoH [Escherichia coli 2730350]
gb|END65718.1| alternative sigma factor RpoH [Escherichia coli P0299483.1]
gb|ENF49191.1| alternative sigma factor RpoH [Escherichia coli P0304816.6]
gb|ENG13948.1| alternative sigma factor RpoH [Escherichia coli P0305260.6]
gb|ENH29739.1| alternative sigma factor RpoH [Escherichia coli P0304816.3]
gb|ENH30026.1| alternative sigma factor RpoH [Escherichia coli P0304816.4]
gb|ENH37001.1| alternative sigma factor RpoH [Escherichia coli P0304816.5]
gb|ERB72663.1| alternative sigma factor RpoH [Escherichia coli 09BKT076207]
gb|ERC18663.1| alternative sigma factor RpoH [Escherichia coli B36-2]
gb|ERC32079.1| alternative sigma factor RpoH [Escherichia coli B7-2]
gb|ERC36336.1| alternative sigma factor RpoH [Escherichia coli B93]
gb|EYD80498.1| alternative sigma factor RpoH [Escherichia coli 1-176-05_S1_C1]
gb|EZJ17238.1| alternative sigma factor RpoH [Escherichia coli 1-182-04_S4_C3]
gb|KDW16415.1| alternative sigma factor RpoH [Escherichia coli 2-156-04_S4_C1]
gb|KEJ06789.1| alternative sigma factor RpoH [Escherichia coli 8-415-05_S4_C2]
gb|KEJ44329.1| alternative sigma factor RpoH [Escherichia coli 2-427-07_S4_C3]
gb|KEL98895.1| alternative sigma factor RpoH [Escherichia coli 6-175-07_S3_C3]
gb|KEM29586.1| alternative sigma factor RpoH [Escherichia coli 6-319-05_S4_C2]
gb|KEM57750.1| alternative sigma factor RpoH [Escherichia coli 6-319-05_S4_C3]
gb|KEM98280.1| alternative sigma factor RpoH [Escherichia coli 7-233-03_S1_C3]
emb|CEE09020.1| alternative sigma factor RpoH [Escherichia coli]
gb|KZO75703.1| RNA polymerase factor sigma-32 [Escherichia coli]
gb|PRW36850.1| alternative sigma factor RpoH [Escherichia coli]
gb|PRW52830.1| alternative sigma factor RpoH [Escherichia coli]
Length = 257
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 63 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 122
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 123 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 182
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 183 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 242
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 243 LEKNAMKKLRAAIEA 257
>gb|ERF98731.1| RNA polymerase factor sigma-32 [Salmonella enterica subsp. enterica
serovar Muenchen str. RKS4129]
Length = 201
Score = 366 bits (940), Expect = e-127
Identities = 185/195 (94%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 7 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 66
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGV+SKDVREMESRMAAQDMTFD+ QPMAPVLYLQDKSSNFA
Sbjct: 67 NQDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKSSNFA 126
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 127 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 186
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 187 LEKNAMKKLRAAIEA 201
>ref|WP_080109661.1| RNA polymerase sigma factor RpoH, partial [Salmonella enterica]
Length = 219
Score = 366 bits (940), Expect = e-127
Identities = 185/195 (94%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 25 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 84
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGV+SKDVREMESRMAAQDMTFD+ QPMAPVLYLQDKSSNFA
Sbjct: 85 NQDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKSSNFA 144
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 145 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 204
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 205 LEKNAMKKLRAAIEA 219
>gb|EHV52977.1| alternative sigma factor RpoH [Escherichia coli DEC6B]
gb|EHX70200.1| alternative sigma factor RpoH [Escherichia coli DEC13E]
gb|EKK40759.1| alternative sigma factor RpoH [Escherichia coli 8.0566]
gb|EKK63737.1| alternative sigma factor RpoH [Escherichia coli 10.0869]
gb|ELV17335.1| alternative sigma factor RpoH [Escherichia coli 09BKT078844]
gb|ELV53152.1| alternative sigma factor RpoH [Escherichia coli 99.1793]
gb|EMW85090.1| alternative sigma factor RpoH [Escherichia coli 180050]
gb|ENE03202.1| alternative sigma factor RpoH [Escherichia coli P0304799.3]
gb|ERC63690.1| alternative sigma factor RpoH [Escherichia coli Bd5610_99]
gb|EZJ29604.1| alternative sigma factor RpoH [Escherichia coli 1-392-07_S4_C2]
gb|KDA68888.1| alternative sigma factor RpoH [Escherichia coli 1-182-04_S1_C2]
gb|KDX23519.1| alternative sigma factor RpoH [Escherichia coli 2-156-04_S4_C2]
gb|KEM46058.1| alternative sigma factor RpoH [Escherichia coli 6-175-07_S4_C3]
Length = 280
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 86 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 145
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 146 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 205
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 206 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 265
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 266 LEKNAMKKLRAAIEA 280
>ref|WP_105272821.1| RNA polymerase sigma factor RpoH [Escherichia sp. MOD1-EC7003]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_104213647.1| RNA polymerase sigma factor RpoH [Escherichia coli]
gb|PPE13810.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_100009083.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_097752711.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_097741236.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_097556592.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_095526231.1| RNA polymerase sigma factor RpoH [Escherichia coli]
gb|PAS54024.1| RNA polymerase sigma factor RpoH [Escherichia coli]
gb|PAS79350.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_095512791.1| RNA polymerase sigma factor RpoH [Escherichia coli]
gb|PAQ96717.1| RNA polymerase factor sigma-32 [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_089623904.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_089621137.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_089565649.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284
>ref|WP_089519799.1| RNA polymerase sigma factor RpoH [Escherichia coli]
Length = 284
Score = 369 bits (946), Expect = e-127
Identities = 187/195 (95%), Positives = 187/195 (95%)
Frame = +1
Query: 1 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 180
VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF
Sbjct: 90 VRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWF 149
Query: 181 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLXXXXXXXXQPMAPVLYLQDKSSNFA 360
NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDL QPMAPVLYLQDKSSNFA
Sbjct: 150 NQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFA 209
Query: 361 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 540
DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ
Sbjct: 210 DGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQ 269
Query: 541 LEKNAMKKLRAAIEA 585
LEKNAMKKLRAAIEA
Sbjct: 270 LEKNAMKKLRAAIEA 284