BLASTX nr result

ID: Acanthopanax23_contig00021394 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00021394
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017244825.1| PREDICTED: protein SHI RELATED SEQUENCE 1-li...    58   6e-07
ref|XP_017257083.1| PREDICTED: protein SHI RELATED SEQUENCE 1 [D...    56   3e-06
ref|XP_017240325.1| PREDICTED: protein SHORT INTERNODES-like [Da...    55   7e-06

>ref|XP_017244825.1| PREDICTED: protein SHI RELATED SEQUENCE 1-like [Daucus carota
           subsp. sativus]
 gb|KZM98793.1| hypothetical protein DCAR_013845 [Daucus carota subsp. sativus]
          Length = 370

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 30/52 (57%), Positives = 33/52 (63%)
 Frame = +3

Query: 57  QRPLNLIXXXXXXXXXXXXPSNLPCVTWLDTSSYPTPLNAFTAGTQFFPPRR 212
           Q+PLNLI             +N P VTW+D S YPTPLNAF AGTQFFPP R
Sbjct: 320 QQPLNLITSGTSTGPTTT--NNPPGVTWIDPSIYPTPLNAFMAGTQFFPPPR 369


>ref|XP_017257083.1| PREDICTED: protein SHI RELATED SEQUENCE 1 [Daucus carota subsp.
           sativus]
 gb|KZM90187.1| hypothetical protein DCAR_022448 [Daucus carota subsp. sativus]
          Length = 335

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
 Frame = +3

Query: 117 SNLPCVTWLDTSS-YPTPLNAFTAGTQFFPPRRP 215
           +N P VTWLD+S+ YPTPLNAF AGTQFFPP RP
Sbjct: 302 TNPPGVTWLDSSTTYPTPLNAFMAGTQFFPPPRP 335


>ref|XP_017240325.1| PREDICTED: protein SHORT INTERNODES-like [Daucus carota subsp.
           sativus]
 gb|KZN01197.1| hypothetical protein DCAR_009951 [Daucus carota subsp. sativus]
          Length = 329

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
 Frame = +3

Query: 57  QRPLNLIXXXXXXXXXXXXPSNLPCVTWLDTSS-YPTPLNAFTAGTQFFPPRRP 215
           Q+PLNL              +N P VTWLD+S+ YPTPLNAF A TQFFPP RP
Sbjct: 286 QQPLNLTTAT----------TNSPGVTWLDSSTTYPTPLNAFMASTQFFPPPRP 329


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