BLASTX nr result

ID: Acanthopanax23_contig00021209 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00021209
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16176.3| unnamed protein product, partial [Vitis vinifera]      63   2e-08
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat...    63   2e-08
gb|POE81471.1| putative pentatricopeptide repeat-containing prot...    58   1e-07
gb|POE81470.1| putative pentatricopeptide repeat-containing prot...    58   9e-07
ref|XP_023876268.1| putative pentatricopeptide repeat-containing...    58   9e-07
ref|XP_010103287.2| putative pentatricopeptide repeat-containing...    56   4e-06
ref|XP_010106220.1| putative pentatricopeptide repeat-containing...    56   4e-06
gb|EXC46504.1| hypothetical protein L484_000619 [Morus notabilis]      56   4e-06

>emb|CBI16176.3| unnamed protein product, partial [Vitis vinifera]
          Length = 819

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +1

Query: 1   LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPT 117
           L++AFELRDDM RRG+KPNRA Y SLIHGTC MSSV  T
Sbjct: 763 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 801


>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +1

Query: 1   LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPT 117
           L++AFELRDDM RRG+KPNRA Y SLIHGTC MSSV  T
Sbjct: 860 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 898


>gb|POE81471.1| putative pentatricopeptide repeat-containing protein [Quercus
           suber]
          Length = 143

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPT 117
           L++AFELRDDM RRG+ PNR  Y +LIHGTC  SSVL T
Sbjct: 105 LTKAFELRDDMIRRGVMPNRVTYNTLIHGTCLKSSVLST 143


>gb|POE81470.1| putative pentatricopeptide repeat-containing protein [Quercus
           suber]
          Length = 908

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPT 117
           L++AFELRDDM RRG+ PNR  Y +LIHGTC  SSVL T
Sbjct: 870 LTKAFELRDDMIRRGVMPNRVTYNTLIHGTCLKSSVLST 908


>ref|XP_023876268.1| putative pentatricopeptide repeat-containing protein At5g59900
            [Quercus suber]
 ref|XP_023876269.1| putative pentatricopeptide repeat-containing protein At5g59900
            [Quercus suber]
          Length = 922

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +1

Query: 1    LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPT 117
            L++AFELRDDM RRG+ PNR  Y +LIHGTC  SSVL T
Sbjct: 884  LTKAFELRDDMIRRGVMPNRVTYNTLIHGTCLKSSVLST 922


>ref|XP_010103287.2| putative pentatricopeptide repeat-containing protein At5g59900
           [Morus notabilis]
          Length = 910

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +1

Query: 1   LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPTGG 123
           L++AFELRDDM RRGL PN+  Y SL+ GTC  S+V P GG
Sbjct: 870 LNKAFELRDDMMRRGLMPNQFTYSSLMQGTCLASTVQPAGG 910


>ref|XP_010106220.1| putative pentatricopeptide repeat-containing protein At5g59900
           [Morus notabilis]
 gb|EXC51944.1| hypothetical protein L484_000629 [Morus notabilis]
          Length = 910

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +1

Query: 1   LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPTGG 123
           L++AFELRDDM RRGL PN+  Y SL+ GTC  S+V P GG
Sbjct: 870 LTKAFELRDDMMRRGLMPNQFTYSSLMQGTCLASTVQPAGG 910


>gb|EXC46504.1| hypothetical protein L484_000619 [Morus notabilis]
          Length = 955

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +1

Query: 1    LSRAFELRDDMTRRGLKPNRAIYYSLIHGTCSMSSVLPTGG 123
            L++AFELRDDM RRGL PN+  Y SL+ GTC  S+V P GG
Sbjct: 915  LNKAFELRDDMMRRGLMPNQFTYSSLMQGTCLASTVQPAGG 955


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