BLASTX nr result

ID: Acanthopanax23_contig00021029 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00021029
         (710 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM94748.1| hypothetical protein DCAR_017990 [Daucus carota s...    60   2e-08
ref|XP_017253914.1| PREDICTED: uncharacterized protein LOC108223...    60   3e-08

>gb|KZM94748.1| hypothetical protein DCAR_017990 [Daucus carota subsp. sativus]
          Length = 90

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 42/96 (43%), Positives = 47/96 (48%)
 Frame = -3

Query: 552 LLGRRAMRDLSMLSSGQQDAHHKIKVGIHKISIPFYFPDSCHLP*NSSFRNLKSSCKIKV 373
           LLGRR +RDL +L S QQDA HKIKV                LP                
Sbjct: 15  LLGRRPIRDLRILHSRQQDADHKIKV----------------LP---------------- 42

Query: 372 HKEMERNSNQPGSFSNEFADVYNEPELVYHIDYHGV 265
            KE  + + QP S  NE A V +E ELVYHIDYHGV
Sbjct: 43  -KETAKVTIQPDSLRNESASVDDERELVYHIDYHGV 77


>ref|XP_017253914.1| PREDICTED: uncharacterized protein LOC108223948 [Daucus carota
           subsp. sativus]
          Length = 111

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 42/96 (43%), Positives = 47/96 (48%)
 Frame = -3

Query: 552 LLGRRAMRDLSMLSSGQQDAHHKIKVGIHKISIPFYFPDSCHLP*NSSFRNLKSSCKIKV 373
           LLGRR +RDL +L S QQDA HKIKV                LP                
Sbjct: 36  LLGRRPIRDLRILHSRQQDADHKIKV----------------LP---------------- 63

Query: 372 HKEMERNSNQPGSFSNEFADVYNEPELVYHIDYHGV 265
            KE  + + QP S  NE A V +E ELVYHIDYHGV
Sbjct: 64  -KETAKVTIQPDSLRNESASVDDERELVYHIDYHGV 98


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