BLASTX nr result

ID: Acanthopanax23_contig00020901 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00020901
         (559 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04996.1| hypothetical protein Ccrd_016686, partial [Cynara...    63   3e-08
ref|XP_021977000.1| E3 SUMO-protein ligase SIZ1-like isoform X2 ...    60   2e-07
ref|XP_021976999.1| E3 SUMO-protein ligase SIZ1-like isoform X1 ...    60   2e-07

>gb|KVI04996.1| hypothetical protein Ccrd_016686, partial [Cynara cardunculus var.
           scolymus]
          Length = 463

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 11/61 (18%)
 Frame = -3

Query: 554 SINNHGNE-----------INSMSYNFGSTSGITNRSSSASFGNPNIIVLSDSEEENASM 408
           SIN+HG             + S+ YN+  TSGITNRSSS+S G+P++IVLSDSEEEN  M
Sbjct: 322 SINHHGTNQFDITTNKDSMMESVPYNYNQTSGITNRSSSSSLGDPSVIVLSDSEEENDDM 381

Query: 407 V 405
           V
Sbjct: 382 V 382


>ref|XP_021977000.1| E3 SUMO-protein ligase SIZ1-like isoform X2 [Helianthus annuus]
          Length = 662

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/56 (58%), Positives = 39/56 (69%)
 Frame = -3

Query: 545 NHGNEINSMSYNFGSTSGITNRSSSASFGNPNIIVLSDSEEENASMVFQEVFP*PD 378
           NH   ++S+ YN   TSGITNRSSS+S G  NIIVLSDS+EEN  MV +   P PD
Sbjct: 524 NHDVMMDSVPYNHNPTSGITNRSSSSSLGEQNIIVLSDSDEENFDMVSETPGP-PD 578


>ref|XP_021976999.1| E3 SUMO-protein ligase SIZ1-like isoform X1 [Helianthus annuus]
 gb|OTG18114.1| putative zinc finger, PHD-type [Helianthus annuus]
          Length = 664

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/56 (58%), Positives = 39/56 (69%)
 Frame = -3

Query: 545 NHGNEINSMSYNFGSTSGITNRSSSASFGNPNIIVLSDSEEENASMVFQEVFP*PD 378
           NH   ++S+ YN   TSGITNRSSS+S G  NIIVLSDS+EEN  MV +   P PD
Sbjct: 526 NHDVMMDSVPYNHNPTSGITNRSSSSSLGEQNIIVLSDSDEENFDMVSETPGP-PD 580


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