BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00020684
         (707 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017238589.1| PREDICTED: double-stranded RNA-binding prote...    77   2e-12
gb|KZN00327.1| hypothetical protein DCAR_009081 [Daucus carota s...    77   2e-12
ref|XP_011034326.1| PREDICTED: double-stranded RNA-binding prote...    61   3e-07
ref|XP_011034325.1| PREDICTED: double-stranded RNA-binding prote...    60   1e-06
ref|XP_011034324.1| PREDICTED: double-stranded RNA-binding prote...    60   1e-06
ref|XP_011034323.1| PREDICTED: double-stranded RNA-binding prote...    60   1e-06
ref|XP_011034322.1| PREDICTED: double-stranded RNA-binding prote...    60   1e-06
emb|CDP10526.1| unnamed protein product [Coffea canephora]             59   1e-06
ref|XP_010319639.1| PREDICTED: double-stranded RNA-binding prote...    58   4e-06
ref|XP_010319636.1| PREDICTED: double-stranded RNA-binding prote...    58   4e-06
ref|XP_004229058.1| PREDICTED: double-stranded RNA-binding prote...    58   5e-06

>ref|XP_017238589.1| PREDICTED: double-stranded RNA-binding protein 1-like [Daucus
           carota subsp. sativus]
          Length = 426

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +2

Query: 77  VSSFNLQPNVIEKVEPKVVLKINSSIEEQAQEIKKKDINGERHRKPSSSENEYAWLQGPT 256
           + SFNLQP+V EKVE  V    N SI E AQ+ +  D NGERH   ++SE+ +A  +G +
Sbjct: 296 IPSFNLQPDVTEKVEEDVARNRNISINE-AQDFQ--DNNGERHINSTTSEDAHA-REGNS 351

Query: 257 SSTSSPPKDCPS-LSSPSIARSDIEISAGAQTSATKRILVCARIPHLTIPDGATILPISD 433
           S+T SPP+D      SP++     EI      ++ K+I++      + IP+GAT+LP  +
Sbjct: 352 STTRSPPQDLKDGAGSPTL-----EIVIPPAQNSIKKIMIIPSTSDMIIPEGATVLPYEN 406

Query: 434 NEWVAMRL 457
           +E+VA+ +
Sbjct: 407 DEYVAITM 414


>gb|KZN00327.1| hypothetical protein DCAR_009081 [Daucus carota subsp. sativus]
          Length = 433

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +2

Query: 77  VSSFNLQPNVIEKVEPKVVLKINSSIEEQAQEIKKKDINGERHRKPSSSENEYAWLQGPT 256
           + SFNLQP+V EKVE  V    N SI E AQ+ +  D NGERH   ++SE+ +A  +G +
Sbjct: 303 IPSFNLQPDVTEKVEEDVARNRNISINE-AQDFQ--DNNGERHINSTTSEDAHA-REGNS 358

Query: 257 SSTSSPPKDCPS-LSSPSIARSDIEISAGAQTSATKRILVCARIPHLTIPDGATILPISD 433
           S+T SPP+D      SP++     EI      ++ K+I++      + IP+GAT+LP  +
Sbjct: 359 STTRSPPQDLKDGAGSPTL-----EIVIPPAQNSIKKIMIIPSTSDMIIPEGATVLPYEN 413

Query: 434 NEWVAMRL 457
           +E+VA+ +
Sbjct: 414 DEYVAITM 421


>ref|XP_011034326.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X5
           [Populus euphratica]
          Length = 520

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 47/144 (32%), Positives = 73/144 (50%)
 Frame = +2

Query: 26  QYSTVSAPSFQNKGALEVSSFNLQPNVIEKVEPKVVLKINSSIEEQAQEIKKKDINGERH 205
           Q +T  +P+ Q   AL++S+ +L  ++   ++  +  K+   IE Q +E + +D      
Sbjct: 375 QSTTCHSPAHQGHEALQLSTPSLLADLTAYLQQNIQPKLPVPIE-QDEEGRGQDSVSAVT 433

Query: 206 RKPSSSENEYAWLQGPTSSTSSPPKDCPSLSSPSIARSDIEISAGAQTSATKRILVCARI 385
              SSS+   + L     S SS P D    S+ S A S IE   G  T+   RI+V  R 
Sbjct: 434 SITSSSDVAISSLPEHDLSPSSLPSDS---STSSAANSSIEHIVGRSTTCQSRIIVHPRG 490

Query: 386 PHLTIPDGATILPISDNEWVAMRL 457
             +T P G T+LPISD  WVA+++
Sbjct: 491 ATVTYPSGTTVLPISDGNWVAVKI 514


>ref|XP_011034325.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X4
           [Populus euphratica]
          Length = 525

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
 Frame = +2

Query: 26  QYSTVSAPSFQNKGALEVSSFNLQPNVIEKVEPKVVLKINSSIEEQAQEIKKKDINGERH 205
           Q +T  +P+ Q   AL++S+ +L  ++   ++  +  K+   IE+  +     +I     
Sbjct: 365 QSTTCHSPAHQGHEALQLSTPSLLADLTAYLQQNIQPKLPVPIEQDEEGRVCSEIRSRHP 424

Query: 206 RKPSSSENEYAWLQGPTSST-----SSP-----PKDCPSLSSPS-IARSDIEISAGAQTS 352
              SS ++  + +   TSS+     S P     P   PS SS S  A S IE   G  T+
Sbjct: 425 FIASSGQDSVSAVTSITSSSDVAISSLPEHDLSPSSLPSDSSTSSAANSSIEHIVGRSTT 484

Query: 353 ATKRILVCARIPHLTIPDGATILPISDNEWVAMRL 457
              RI+V  R   +T P G T+LPISD  WVA+++
Sbjct: 485 CQSRIIVHPRGATVTYPSGTTVLPISDGNWVAVKI 519


>ref|XP_011034324.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X3
           [Populus euphratica]
          Length = 528

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
 Frame = +2

Query: 26  QYSTVSAPSFQNKGALEVSSFNLQPNVIEKVEPKVVLKINSSIEEQAQEIKKKDINGERH 205
           Q +T  +P+ Q   AL++S+ +L  ++   ++  +  K+   IE+  +     +I     
Sbjct: 368 QSTTCHSPAHQGHEALQLSTPSLLADLTAYLQQNIQPKLPVPIEQDEEGRVCSEIRSRHP 427

Query: 206 RKPSSSENEYAWLQGPTSST-----SSP-----PKDCPSLSSPS-IARSDIEISAGAQTS 352
              SS ++  + +   TSS+     S P     P   PS SS S  A S IE   G  T+
Sbjct: 428 FIASSGQDSVSAVTSITSSSDVAISSLPEHDLSPSSLPSDSSTSSAANSSIEHIVGRSTT 487

Query: 353 ATKRILVCARIPHLTIPDGATILPISDNEWVAMRL 457
              RI+V  R   +T P G T+LPISD  WVA+++
Sbjct: 488 CQSRIIVHPRGATVTYPSGTTVLPISDGNWVAVKI 522


>ref|XP_011034323.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
           [Populus euphratica]
          Length = 532

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
 Frame = +2

Query: 26  QYSTVSAPSFQNKGALEVSSFNLQPNVIEKVEPKVVLKINSSIEEQAQEIKKKDINGERH 205
           Q +T  +P+ Q   AL++S+ +L  ++   ++  +  K+   IE+  +     +I     
Sbjct: 372 QSTTCHSPAHQGHEALQLSTPSLLADLTAYLQQNIQPKLPVPIEQDEEGRVCSEIRSRHP 431

Query: 206 RKPSSSENEYAWLQGPTSST-----SSP-----PKDCPSLSSPS-IARSDIEISAGAQTS 352
              SS ++  + +   TSS+     S P     P   PS SS S  A S IE   G  T+
Sbjct: 432 FIASSGQDSVSAVTSITSSSDVAISSLPEHDLSPSSLPSDSSTSSAANSSIEHIVGRSTT 491

Query: 353 ATKRILVCARIPHLTIPDGATILPISDNEWVAMRL 457
              RI+V  R   +T P G T+LPISD  WVA+++
Sbjct: 492 CQSRIIVHPRGATVTYPSGTTVLPISDGNWVAVKI 526


>ref|XP_011034322.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
           [Populus euphratica]
          Length = 535

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
 Frame = +2

Query: 26  QYSTVSAPSFQNKGALEVSSFNLQPNVIEKVEPKVVLKINSSIEEQAQEIKKKDINGERH 205
           Q +T  +P+ Q   AL++S+ +L  ++   ++  +  K+   IE+  +     +I     
Sbjct: 375 QSTTCHSPAHQGHEALQLSTPSLLADLTAYLQQNIQPKLPVPIEQDEEGRVCSEIRSRHP 434

Query: 206 RKPSSSENEYAWLQGPTSST-----SSP-----PKDCPSLSSPS-IARSDIEISAGAQTS 352
              SS ++  + +   TSS+     S P     P   PS SS S  A S IE   G  T+
Sbjct: 435 FIASSGQDSVSAVTSITSSSDVAISSLPEHDLSPSSLPSDSSTSSAANSSIEHIVGRSTT 494

Query: 353 ATKRILVCARIPHLTIPDGATILPISDNEWVAMRL 457
              RI+V  R   +T P G T+LPISD  WVA+++
Sbjct: 495 CQSRIIVHPRGATVTYPSGTTVLPISDGNWVAVKI 529


>emb|CDP10526.1| unnamed protein product [Coffea canephora]
          Length = 488

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
 Frame = +2

Query: 110 EKVEPKVVLKINSSIEEQAQEIKKKDINGERHR-KPSSSENEYA-WLQGPTSSTSSPPKD 283
           + ++PK +  +  +++     +K ++ N +R+R  P+ + +E    +  P+S++ + P  
Sbjct: 369 QNIQPKPIPTVKENLDAA---VKGEEKNAKRYRCSPTENMHESRPEISSPSSASLNTPSS 425

Query: 284 CPSLSSPSIA-RSDIEISAGAQTSATKRILVCARIPHLTIPDGATILPISDNEWVAMRLE 460
           C   S PS++  SD    AG  T  TK ILV  R   + IP+GA+ILP SD++WVA+++E
Sbjct: 426 C---SMPSVSVESDAAKPAGGNTRRTK-ILVFPRGSPMEIPEGASILPYSDDKWVAVKVE 481

Query: 461 GNHS 472
            N +
Sbjct: 482 LNQN 485


>ref|XP_010319639.1| PREDICTED: double-stranded RNA-binding protein 4 isoform X4
           [Solanum lycopersicum]
          Length = 320

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
 Frame = +2

Query: 152 IEEQAQEIKKKDINGERHRKPSSSENEYAWLQGPTSSTSSPPKDCPSLSSPSIARS-DIE 328
           IEE + + ++ D N +RHR  SS+ N Y+ ++    +      D    SS ++A S D +
Sbjct: 217 IEELSLQNEEADTNAKRHRC-SSAPNTYSLIRDHRPAAPFVASD----SSDAVAESADSD 271

Query: 329 ISAGAQTSATKRILVCARIPHLTIPDGATILPISDNEWVAMRLEGNHSH 475
             AG     +++I +  R  ++ +P GA++LP SD +WVA  LE N +H
Sbjct: 272 TYAGTSILPSEKIFIFPRKANMNLPSGASVLPCSDEKWVAASLELNQNH 320


>ref|XP_010319636.1| PREDICTED: double-stranded RNA-binding protein 1 isoform X3
           [Solanum lycopersicum]
          Length = 388

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
 Frame = +2

Query: 152 IEEQAQEIKKKDINGERHRKPSSSENEYAWLQGPTSSTSSPPKDCPSLSSPSIARS-DIE 328
           IEE + + ++ D N +RHR  SS+ N Y+ ++    +      D    SS ++A S D +
Sbjct: 285 IEELSLQNEEADTNAKRHRC-SSAPNTYSLIRDHRPAAPFVASD----SSDAVAESADSD 339

Query: 329 ISAGAQTSATKRILVCARIPHLTIPDGATILPISDNEWVAMRLEGNHSH 475
             AG     +++I +  R  ++ +P GA++LP SD +WVA  LE N +H
Sbjct: 340 TYAGTSILPSEKIFIFPRKANMNLPSGASVLPCSDEKWVAASLELNQNH 388


>ref|XP_004229058.1| PREDICTED: double-stranded RNA-binding protein 1 isoform X1
           [Solanum lycopersicum]
          Length = 417

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
 Frame = +2

Query: 152 IEEQAQEIKKKDINGERHRKPSSSENEYAWLQGPTSSTSSPPKDCPSLSSPSIARS-DIE 328
           IEE + + ++ D N +RHR  SS+ N Y+ ++    +      D    SS ++A S D +
Sbjct: 314 IEELSLQNEEADTNAKRHRC-SSAPNTYSLIRDHRPAAPFVASD----SSDAVAESADSD 368

Query: 329 ISAGAQTSATKRILVCARIPHLTIPDGATILPISDNEWVAMRLEGNHSH 475
             AG     +++I +  R  ++ +P GA++LP SD +WVA  LE N +H
Sbjct: 369 TYAGTSILPSEKIFIFPRKANMNLPSGASVLPCSDEKWVAASLELNQNH 417