BLASTX nr result
ID: Acanthopanax23_contig00020494
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00020494
(763 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZM96955.1| hypothetical protein DCAR_015683 [Daucus carota s... 68 2e-09
ref|XP_017245179.1| PREDICTED: pentatricopeptide repeat-containi... 68 2e-09
ref|XP_017245178.1| PREDICTED: pentatricopeptide repeat-containi... 68 2e-09
ref|XP_024161506.1| pentatricopeptide repeat-containing protein ... 60 2e-06
gb|PRQ23934.1| putative tetratricopeptide-like helical domain-co... 60 2e-06
ref|XP_012067178.1| pentatricopeptide repeat-containing protein ... 59 2e-06
ref|XP_004292418.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
ref|XP_011040797.1| PREDICTED: pentatricopeptide repeat-containi... 59 4e-06
ref|XP_016650691.1| PREDICTED: pentatricopeptide repeat-containi... 59 4e-06
gb|OAP10591.1| hypothetical protein AXX17_AT2G12380 [Arabidopsis... 58 7e-06
gb|AAD25139.1| putative selenium-binding protein [Arabidopsis th... 58 7e-06
ref|NP_001318238.1| Tetratricopeptide repeat (TPR)-like superfam... 58 8e-06
ref|XP_022744125.1| pentatricopeptide repeat-containing protein ... 58 8e-06
>gb|KZM96955.1| hypothetical protein DCAR_015683 [Daucus carota subsp. sativus]
Length = 654
Score = 68.2 bits (165), Expect = 2e-09
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +2
Query: 569 GRGIFEPNIANLVLVIQACKAVNDGLRIHGYVIKSRFCTISSVQNS 706
G G+FEPN+ANLVLVIQ C+ V +GL IH YVIK FC++SSVQNS
Sbjct: 54 GTGMFEPNVANLVLVIQECRNVYEGLIIHCYVIKRGFCSVSSVQNS 99
>ref|XP_017245179.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210
isoform X2 [Daucus carota subsp. sativus]
Length = 719
Score = 68.2 bits (165), Expect = 2e-09
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +2
Query: 569 GRGIFEPNIANLVLVIQACKAVNDGLRIHGYVIKSRFCTISSVQNS 706
G G+FEPN+ANLVLVIQ C+ V +GL IH YVIK FC++SSVQNS
Sbjct: 144 GTGMFEPNVANLVLVIQECRNVYEGLIIHCYVIKRGFCSVSSVQNS 189
>ref|XP_017245178.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210
isoform X1 [Daucus carota subsp. sativus]
Length = 744
Score = 68.2 bits (165), Expect = 2e-09
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +2
Query: 569 GRGIFEPNIANLVLVIQACKAVNDGLRIHGYVIKSRFCTISSVQNS 706
G G+FEPN+ANLVLVIQ C+ V +GL IH YVIK FC++SSVQNS
Sbjct: 144 GTGMFEPNVANLVLVIQECRNVYEGLIIHCYVIKRGFCSVSSVQNS 189
>ref|XP_024161506.1| pentatricopeptide repeat-containing protein At2g17210 [Rosa
chinensis]
ref|XP_024161507.1| pentatricopeptide repeat-containing protein At2g17210 [Rosa
chinensis]
ref|XP_024161508.1| pentatricopeptide repeat-containing protein At2g17210 [Rosa
chinensis]
ref|XP_024161509.1| pentatricopeptide repeat-containing protein At2g17210 [Rosa
chinensis]
Length = 754
Score = 59.7 bits (143), Expect = 2e-06
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
Frame = +2
Query: 581 FEPNIANLVLVIQACK----AVNDGLRIHGYVIKSRFCTISSVQNSTTG--AGSDEMVS 739
F+PN + LVLVIQAC+ A+ +GL++HGYVI+ FC ISSVQNS A D+M S
Sbjct: 144 FQPNTSTLVLVIQACRWLRAAIYEGLKVHGYVIRGGFCYISSVQNSLLSLYAEDDDMES 202
>gb|PRQ23934.1| putative tetratricopeptide-like helical domain-containing protein
[Rosa chinensis]
Length = 775
Score = 59.7 bits (143), Expect = 2e-06
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
Frame = +2
Query: 581 FEPNIANLVLVIQACK----AVNDGLRIHGYVIKSRFCTISSVQNSTTG--AGSDEMVS 739
F+PN + LVLVIQAC+ A+ +GL++HGYVI+ FC ISSVQNS A D+M S
Sbjct: 165 FQPNTSTLVLVIQACRWLRAAIYEGLKVHGYVIRGGFCYISSVQNSLLSLYAEDDDMES 223
>ref|XP_012067178.1| pentatricopeptide repeat-containing protein At2g17210 [Jatropha
curcas]
gb|KDP42037.1| hypothetical protein JCGZ_03100 [Jatropha curcas]
Length = 742
Score = 59.3 bits (142), Expect = 2e-06
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 3/45 (6%)
Frame = +2
Query: 581 FEPNIANLVLVIQAC---KAVNDGLRIHGYVIKSRFCTISSVQNS 706
FEPNI+ LVLVIQAC KA ++GL++HGY+I+S F ISS+QNS
Sbjct: 144 FEPNISTLVLVIQACNSLKAKHEGLQVHGYIIQSGFWAISSIQNS 188
>ref|XP_004292418.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210
[Fragaria vesca subsp. vesca]
ref|XP_011458265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210
[Fragaria vesca subsp. vesca]
ref|XP_011458267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210
[Fragaria vesca subsp. vesca]
Length = 750
Score = 59.3 bits (142), Expect = 2e-06
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Frame = +2
Query: 581 FEPNIANLVLVIQACKAVND---GLRIHGYVIKSRFCTISSVQNSTTG--AGSDEMVS 739
F PN + LVLVIQAC+ + D GL++HGYVI++ FC ISSVQNS A D+M S
Sbjct: 141 FRPNTSTLVLVIQACRRLRDKCEGLKVHGYVIQAGFCCISSVQNSLLSLYAEDDDMES 198
>ref|XP_011040797.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210
[Populus euphratica]
Length = 749
Score = 58.5 bits (140), Expect = 4e-06
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = +2
Query: 581 FEPNIANLVLVIQACKAV---NDGLRIHGYVIKSRFCTISSVQNS 706
FEPNI+ +VLVIQAC+ + +DGL +HGYVIKS F ISSVQNS
Sbjct: 145 FEPNISTMVLVIQACRILGTKHDGLILHGYVIKSGFWAISSVQNS 189
>ref|XP_016650691.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210
[Prunus mume]
Length = 751
Score = 58.5 bits (140), Expect = 4e-06
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = +2
Query: 581 FEPNIANLVLVIQACKAVND---GLRIHGYVIKSRFCTISSVQNSTTGAGSDE 730
F+PN + LVLVIQAC+ + D GL +HGYVI+ FC++SSVQNS ++E
Sbjct: 145 FQPNTSTLVLVIQACRRLRDKFEGLIVHGYVIRGGFCSVSSVQNSLLSLYAEE 197
>gb|OAP10591.1| hypothetical protein AXX17_AT2G12380 [Arabidopsis thaliana]
Length = 625
Score = 57.8 bits (138), Expect = 7e-06
Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +2
Query: 581 FEPNIANLVLVIQACKAV-NDGLRIHGYVIKSRFCTISSVQNS 706
FEPN + LVLVI AC+++ DG +IHGYVI+S FC ISSVQNS
Sbjct: 123 FEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNS 165
>gb|AAD25139.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 715
Score = 57.8 bits (138), Expect = 7e-06
Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +2
Query: 581 FEPNIANLVLVIQACKAV-NDGLRIHGYVIKSRFCTISSVQNS 706
FEPN + LVLVI AC+++ DG +IHGYVI+S FC ISSVQNS
Sbjct: 123 FEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNS 165
>ref|NP_001318238.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
gb|AEC06598.2| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 736
Score = 57.8 bits (138), Expect = 8e-06
Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +2
Query: 581 FEPNIANLVLVIQACKAV-NDGLRIHGYVIKSRFCTISSVQNS 706
FEPN + LVLVI AC+++ DG +IHGYVI+S FC ISSVQNS
Sbjct: 144 FEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNS 186
>ref|XP_022744125.1| pentatricopeptide repeat-containing protein At2g17210 [Durio
zibethinus]
Length = 742
Score = 57.8 bits (138), Expect = 8e-06
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 3/45 (6%)
Frame = +2
Query: 581 FEPNIANLVLVIQACKAV---NDGLRIHGYVIKSRFCTISSVQNS 706
FEPN + LVLVIQAC+++ ++GL +HGY+IKS C I S+QNS
Sbjct: 144 FEPNTSTLVLVIQACRSIGAYSEGLEVHGYMIKSGLCAIDSIQNS 188