BLASTX nr result

ID: Acanthopanax23_contig00020082 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00020082
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017255104.1| PREDICTED: probable tyrosine-protein phospha...    61   2e-08
ref|XP_017253185.1| PREDICTED: probable tyrosine-protein phospha...    60   6e-08
ref|XP_017252835.1| PREDICTED: probable tyrosine-protein phospha...    54   6e-06
ref|XP_017253183.1| PREDICTED: probable tyrosine-protein phospha...    54   8e-06

>ref|XP_017255104.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform
           X2 [Daucus carota subsp. sativus]
          Length = 219

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +2

Query: 2   FMELFDVSTFKHIPMAFSCLKSCEGMMVSFPSEDN 106
           FMELFDVSTFKHIP  FSCLKSCEG M SF  +DN
Sbjct: 179 FMELFDVSTFKHIPKEFSCLKSCEGTMFSFYPKDN 213


>ref|XP_017253185.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform
           X4 [Daucus carota subsp. sativus]
          Length = 224

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +2

Query: 2   FMELFDVSTFKHIPMAFSCLKSCEGMMVSFPSEDNK 109
           FMELFD+STFKHIP  FSCLKS EG ++S+P +DN+
Sbjct: 181 FMELFDISTFKHIPKEFSCLKSFEGTIISYPPKDNE 216


>ref|XP_017252835.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Daucus
           carota subsp. sativus]
 gb|KZM96014.1| hypothetical protein DCAR_019256 [Daucus carota subsp. sativus]
          Length = 225

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   FMELFDVSTFKHIPMAFSCLKSCEGMMVSFPSED 103
           FMELFDVS FKH+P+  S LKSCEG   SFPSED
Sbjct: 191 FMELFDVSAFKHLPITCSFLKSCEGRTHSFPSED 224


>ref|XP_017253183.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform
           X2 [Daucus carota subsp. sativus]
          Length = 228

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 4/40 (10%)
 Frame = +2

Query: 2   FMELFDVSTFKHIPMAFSCLK----SCEGMMVSFPSEDNK 109
           FMELFD+STFKHIP  FSCLK    S EG ++S+P +DN+
Sbjct: 181 FMELFDISTFKHIPKEFSCLKRMNFSFEGTIISYPPKDNE 220


Top