BLASTX nr result

ID: Acanthopanax23_contig00020060 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00020060
         (482 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM90722.1| hypothetical protein DCAR_021913 [Daucus carota s...   109   2e-25
ref|XP_017256528.1| PREDICTED: probable ubiquitin-like-specific ...   109   9e-25

>gb|KZM90722.1| hypothetical protein DCAR_021913 [Daucus carota subsp. sativus]
          Length = 371

 Score =  109 bits (273), Expect = 2e-25
 Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2   TSSDEFAACVVEDSQEIIGTQDANE-CQGSANERDKCASSDQEANSIAVTHLPADQMPSD 178
           T SDEFA CVVEDS+EI  TQD ++ CQ SAN ++K +S +Q ANS+A T LP++ M +D
Sbjct: 223 TPSDEFADCVVEDSEEICETQDDDDVCQRSANHQNKASSFNQVANSVA-TSLPSESMLND 281

Query: 179 GLAACVISDSEEEQPESPGINVKCGSSSHQGDNNIALPNQKANFIEITDSTEGHSPVSEI 358
           GLA CV+  SEE++  +P +  K G  ++Q +    L ++++NFIEITDS E H+ +   
Sbjct: 282 GLANCVVGASEEKKFMTPWLKAKFG-CAYQQEVTAVLSSEESNFIEITDSGERHTSL--- 337

Query: 359 KGRALRNRSNYIDIPSTQSSKGSRRRAAKKPRAMVLEGESP 481
                             +S    R +AK+PR M+LE E P
Sbjct: 338 ------------------TSDAEERMSAKRPRNMLLEEEEP 360


>ref|XP_017256528.1| PREDICTED: probable ubiquitin-like-specific protease 2A [Daucus
            carota subsp. sativus]
          Length = 897

 Score =  109 bits (273), Expect = 9e-25
 Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2    TSSDEFAACVVEDSQEIIGTQDANE-CQGSANERDKCASSDQEANSIAVTHLPADQMPSD 178
            T SDEFA CVVEDS+EI  TQD ++ CQ SAN ++K +S +Q ANS+A T LP++ M +D
Sbjct: 749  TPSDEFADCVVEDSEEICETQDDDDVCQRSANHQNKASSFNQVANSVA-TSLPSESMLND 807

Query: 179  GLAACVISDSEEEQPESPGINVKCGSSSHQGDNNIALPNQKANFIEITDSTEGHSPVSEI 358
            GLA CV+  SEE++  +P +  K G  ++Q +    L ++++NFIEITDS E H+ +   
Sbjct: 808  GLANCVVGASEEKKFMTPWLKAKFG-CAYQQEVTAVLSSEESNFIEITDSGERHTSL--- 863

Query: 359  KGRALRNRSNYIDIPSTQSSKGSRRRAAKKPRAMVLEGESP 481
                              +S    R +AK+PR M+LE E P
Sbjct: 864  ------------------TSDAEERMSAKRPRNMLLEEEEP 886


Top