BLASTX nr result

ID: Acanthopanax23_contig00020046 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00020046
         (570 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV78637.1| LOW QUALITY PROTEIN: Myb_DNA-bind_3 domain-conta...    57   2e-06

>dbj|GAV78637.1| LOW QUALITY PROTEIN: Myb_DNA-bind_3 domain-containing protein,
           partial [Cephalotus follicularis]
          Length = 297

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 7/146 (4%)
 Frame = -3

Query: 547 DIDKLVFHNEVSLENFVDLDG--AEEFPPXXXXXXXXXXXXXSNAKKRKVVRSQDDDF-- 380
           DID LV  NEV+LENF  L+    E   P             S  KKRK   S DDD+  
Sbjct: 155 DIDHLVSQNEVTLENFEQLNDNIQELLSPVMPSRLQSQSAGSSKGKKRK--NSNDDDYEV 212

Query: 379 ---NSLFSRVVEVINVGNENLVNALKSSQSRVYTSDEICKXXXXXXXXXXXXXEAYDWLL 209
                +   +   I  GN      L+ SQ R Y+ +E+               ++Y +L+
Sbjct: 213 EIVKDVMMEIAGAIREGNV----VLEKSQPRQYSEEELSVELAEIDVEPHLLTKSYIYLV 268

Query: 208 DNDKMVRKFFGYPQEKRKMALEKMMS 131
            N  M+R FFG P   RK  L +MM+
Sbjct: 269 RNPDMMRAFFGCPISMRKQVLMEMMN 294


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