BLASTX nr result
ID: Acanthopanax23_contig00020006
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00020006
(473 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018851530.1| PREDICTED: DNA ligase 4 [Juglans regia] 94 4e-19
ref|XP_019078590.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vi... 92 1e-18
ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vi... 92 1e-18
emb|CBI17913.3| unnamed protein product, partial [Vitis vinifera] 92 1e-18
ref|XP_015883942.1| PREDICTED: DNA ligase 4 [Ziziphus jujuba] 90 6e-18
ref|XP_023914972.1| DNA ligase 4 [Quercus suber] 85 5e-16
gb|POF07460.1| dna ligase 4 [Quercus suber] 85 5e-16
gb|PON91014.1| DNA ligase, ATP-dependent [Trema orientalis] 82 4e-15
gb|PON55992.1| Ribosomal protein [Parasponia andersonii] 80 2e-14
ref|XP_017259049.1| PREDICTED: DNA ligase 4 isoform X2 [Daucus c... 80 3e-14
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume] 79 5e-14
gb|ONI27220.1| hypothetical protein PRUPE_1G074600 [Prunus persica] 79 6e-14
ref|XP_020410772.1| DNA ligase 4 isoform X2 [Prunus persica] >gi... 79 6e-14
ref|XP_020410771.1| DNA ligase 4 isoform X1 [Prunus persica] >gi... 79 6e-14
ref|XP_017259048.1| PREDICTED: DNA ligase 4 isoform X1 [Daucus c... 75 1e-12
dbj|GAV59686.1| DNA_ligase_A_M domain-containing protein/DNA_lig... 74 3e-12
ref|XP_021815994.1| DNA ligase 4 isoform X2 [Prunus avium] 73 5e-12
ref|XP_021815993.1| DNA ligase 4 isoform X1 [Prunus avium] 73 5e-12
ref|XP_009359940.1| PREDICTED: DNA ligase 4 isoform X2 [Pyrus x ... 73 5e-12
ref|XP_018503760.1| PREDICTED: DNA ligase 4 isoform X1 [Pyrus x ... 73 5e-12
>ref|XP_018851530.1| PREDICTED: DNA ligase 4 [Juglans regia]
Length = 1067
Score = 93.6 bits (231), Expect = 4e-19
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SS RGK EQ+ +D+ +W D+V L T+S++ +E+ E LEVM DPVQAMLLDMI
Sbjct: 959 SSPRGKVAEQEVEKDVGYQKWYDKVPEVGLTTTLSSQHSERSEKLEVMTDPVQAMLLDMI 1018
Query: 291 PSLG--TQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSLG + + T T + E QP D VSYKD+A +LLKDW
Sbjct: 1019 PSLGVTAARAKDTITVTDGETQPLDPNAEPKKKKKVSYKDVAGELLKDW 1067
>ref|XP_019078590.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera]
Length = 933
Score = 92.0 bits (227), Expect = 1e-18
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SSQRGK E++ A D + +W+DR L ++K E LEVMVDPVQAMLLDMI
Sbjct: 827 SSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMI 886
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSLG +K EST+ ++ E+ P + VSYKD+A LLKDW
Sbjct: 887 PSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 933
>ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera]
Length = 1162
Score = 92.0 bits (227), Expect = 1e-18
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SSQRGK E++ A D + +W+DR L ++K E LEVMVDPVQAMLLDMI
Sbjct: 1056 SSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMI 1115
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSLG +K EST+ ++ E+ P + VSYKD+A LLKDW
Sbjct: 1116 PSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 1162
>emb|CBI17913.3| unnamed protein product, partial [Vitis vinifera]
Length = 1163
Score = 92.0 bits (227), Expect = 1e-18
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SSQRGK E++ A D + +W+DR L ++K E LEVMVDPVQAMLLDMI
Sbjct: 1057 SSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMI 1116
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSLG +K EST+ ++ E+ P + VSYKD+A LLKDW
Sbjct: 1117 PSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 1163
>ref|XP_015883942.1| PREDICTED: DNA ligase 4 [Ziziphus jujuba]
Length = 1059
Score = 90.1 bits (222), Expect = 6e-18
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SSQRGK EQ ED++ EW +RV ++ N +N+K E LE+M DPV+AMLLDMI
Sbjct: 949 SSQRGKATEQ---EDVRHEEWFNRVPEIDMSEKCDNEDNKKPEKLEMMTDPVEAMLLDMI 1005
Query: 291 PSLGTQKVESTSTALESEEQPS--------DXXXXXXXXXXVSYKDIACDLLKDW 151
PSLGT+K+E+ + + E + +PS D VSYKD+A +LLKDW
Sbjct: 1006 PSLGTKKIETANKSFE-DGKPSADMNAPSADLNVEPTKKKKVSYKDVAGELLKDW 1059
>ref|XP_023914972.1| DNA ligase 4 [Quercus suber]
Length = 1159
Score = 84.7 bits (208), Expect = 5e-16
Identities = 49/107 (45%), Positives = 67/107 (62%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SS RGK E++ +D++ E+ + V L T +++E+ E EVM+DPVQAMLLDM
Sbjct: 1054 SSYRGKAAEEEVEKDVRYEEY-NIVPNIELIETHRIQDSERPEKFEVMIDPVQAMLLDMF 1112
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSLG +K+E+T T LE E+ D VSYKD+A +LLKDW
Sbjct: 1113 PSLGVKKIETTDTILEDEKLLLDPNTEPTKKKKVSYKDVAGELLKDW 1159
>gb|POF07460.1| dna ligase 4 [Quercus suber]
Length = 1159
Score = 84.7 bits (208), Expect = 5e-16
Identities = 49/107 (45%), Positives = 67/107 (62%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SS RGK E++ +D++ E+ + V L T +++E+ E EVM+DPVQAMLLDM
Sbjct: 1054 SSYRGKAAEEEVEKDVRYEEY-NIVPNIELIETHRIQDSERPEKFEVMIDPVQAMLLDMF 1112
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSLG +K+E+T T LE E+ D VSYKD+A +LLKDW
Sbjct: 1113 PSLGVKKIETTDTILEDEKLLLDPNTEPTKKKKVSYKDVAGELLKDW 1159
>gb|PON91014.1| DNA ligase, ATP-dependent [Trema orientalis]
Length = 1165
Score = 82.0 bits (201), Expect = 4e-15
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SS R EI+Q+ E+ + EW +++ + S +N K + LEVM DPV AMLLDMI
Sbjct: 1057 SSVRHNEIKQEGEENSRHEEWFNKLPEIQMTEKYSWEKN-KQDKLEVMTDPVHAMLLDMI 1115
Query: 291 PSLGTQKVESTSTALESEEQPSD---XXXXXXXXXXVSYKDIACDLLKDW 151
PSLG QK ++ +T +E E+ P D VSYKD+A +LLKDW
Sbjct: 1116 PSLGKQKTDTANTRIEDEKPPMDVNAAEPSAPKKKKVSYKDVASELLKDW 1165
>gb|PON55992.1| Ribosomal protein [Parasponia andersonii]
Length = 758
Score = 79.7 bits (195), Expect = 2e-14
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SS R EI+++ E+ + GEW + + S +N K LEVM PV AMLLDMI
Sbjct: 650 SSVRHNEIKREGEENSRHGEWFNEPPEIQMMEKYSGEKN-KQHKLEVMTGPVNAMLLDMI 708
Query: 291 PSLGTQKVESTSTALESEEQPSD---XXXXXXXXXXVSYKDIACDLLKDW 151
PSLG QK ++T+T +E ++ P D VSYKD+A +LLKDW
Sbjct: 709 PSLGKQKTDTTNTRIEDDKPPVDVNAAEPSAPRKKKVSYKDVASELLKDW 758
>ref|XP_017259049.1| PREDICTED: DNA ligase 4 isoform X2 [Daucus carota subsp. sativus]
Length = 1179
Score = 79.7 bits (195), Expect = 3e-14
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 20/126 (15%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SSQRG IE + E ++ +W+D +HGT + S NE E LEVMVDPVQ++LLDMI
Sbjct: 1055 SSQRGNVIENMDIEGTERSKWVDTLHGTGMEERKSIGSNEP-EKLEVMVDPVQSLLLDMI 1113
Query: 291 PSLGTQK---VES-----------------TSTALESEEQPSDXXXXXXXXXXVSYKDIA 172
PSLGTQ ES T+ ES+ QPS+ VSYKD+A
Sbjct: 1114 PSLGTQTNAVTESKPQPQTNAVTESKPQPQTNAVTESKPQPSEPNQVPTKKKKVSYKDLA 1173
Query: 171 CDLLKD 154
+LL D
Sbjct: 1174 YNLLGD 1179
>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
Length = 1130
Score = 79.0 bits (193), Expect = 5e-14
Identities = 46/107 (42%), Positives = 63/107 (58%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
S QR Q+ AEDI+ + ++ + + ++ K E LEVM DPVQAML DMI
Sbjct: 1024 SLQRDNAAVQEVAEDIRFEDHSYQIPDVKMIEKCNIEDSGKPEKLEVMADPVQAMLFDMI 1083
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSL +KVE+T+T++E E+ D VSYKD+A +LLKDW
Sbjct: 1084 PSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 1130
>gb|ONI27220.1| hypothetical protein PRUPE_1G074600 [Prunus persica]
Length = 835
Score = 78.6 bits (192), Expect = 6e-14
Identities = 46/107 (42%), Positives = 62/107 (57%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
S QR Q+ AEDI + ++ + + ++ K E LEVM DPVQAML DMI
Sbjct: 729 SLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKCNIEDSGKPEKLEVMADPVQAMLFDMI 788
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSL +KVE+T+T++E E+ D VSYKD+A +LLKDW
Sbjct: 789 PSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 835
>ref|XP_020410772.1| DNA ligase 4 isoform X2 [Prunus persica]
ref|XP_020410773.1| DNA ligase 4 isoform X2 [Prunus persica]
Length = 934
Score = 78.6 bits (192), Expect = 6e-14
Identities = 46/107 (42%), Positives = 62/107 (57%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
S QR Q+ AEDI + ++ + + ++ K E LEVM DPVQAML DMI
Sbjct: 828 SLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKCNIEDSGKPEKLEVMADPVQAMLFDMI 887
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSL +KVE+T+T++E E+ D VSYKD+A +LLKDW
Sbjct: 888 PSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 934
>ref|XP_020410771.1| DNA ligase 4 isoform X1 [Prunus persica]
gb|ONI27219.1| hypothetical protein PRUPE_1G074600 [Prunus persica]
Length = 1163
Score = 78.6 bits (192), Expect = 6e-14
Identities = 46/107 (42%), Positives = 62/107 (57%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
S QR Q+ AEDI + ++ + + ++ K E LEVM DPVQAML DMI
Sbjct: 1057 SLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKCNIEDSGKPEKLEVMADPVQAMLFDMI 1116
Query: 291 PSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
PSL +KVE+T+T++E E+ D VSYKD+A +LLKDW
Sbjct: 1117 PSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 1163
>ref|XP_017259048.1| PREDICTED: DNA ligase 4 isoform X1 [Daucus carota subsp. sativus]
Length = 1191
Score = 75.1 bits (183), Expect = 1e-12
Identities = 54/138 (39%), Positives = 68/138 (49%), Gaps = 32/138 (23%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
SSQRG IE + E ++ +W+D +HGT + S NE E LEVMVDPVQ++LLDMI
Sbjct: 1055 SSQRGNVIENMDIEGTERSKWVDTLHGTGMEERKSIGSNEP-EKLEVMVDPVQSLLLDMI 1113
Query: 291 PSLGTQK---VES-----------------------------TSTALESEEQPSDXXXXX 208
PSLGTQ ES T+ ES+ QPS+
Sbjct: 1114 PSLGTQTNAVTESKPQPQTNAVTESKPQPQTNAVTESKPQPQTNAVTESKPQPSEPNQVP 1173
Query: 207 XXXXXVSYKDIACDLLKD 154
VSYKD+A +LL D
Sbjct: 1174 TKKKKVSYKDLAYNLLGD 1191
>dbj|GAV59686.1| DNA_ligase_A_M domain-containing protein/DNA_ligase_A_N
domain-containing protein/DNA_ligase_A_C
domain-containing protein/PTCB-BRCT domain-containing
protein [Cephalotus follicularis]
Length = 1159
Score = 73.9 bits (180), Expect = 3e-12
Identities = 45/85 (52%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Frame = -3
Query: 360 ENEKLEMLEVMVDPVQAMLLDMIPSLGT---------------QKVESTSTALESEEQPS 226
ENEK E LEVMVDPVQAMLLDMIPSLG +KVEST+ E+E+ PS
Sbjct: 1075 ENEKHEKLEVMVDPVQAMLLDMIPSLGNKKFETKNPITPSLGIEKVESTNPTPENEKPPS 1134
Query: 225 DXXXXXXXXXXVSYKDIACDLLKDW 151
D VSYKDI +LKDW
Sbjct: 1135 DSSSEPVKKKKVSYKDIVGVMLKDW 1159
>ref|XP_021815994.1| DNA ligase 4 isoform X2 [Prunus avium]
Length = 1157
Score = 73.2 bits (178), Expect = 5e-12
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Frame = -3
Query: 456 KEIEQKNA--EDIKQGEWID----RVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 295
+ ++++NA +++ +G W + ++ + + + K E LEVM DPVQAM DM
Sbjct: 1050 ESLQRENAAVQEVAEGIWFEDHSYQIPDVEMIEKCNIENSGKPEKLEVMADPVQAMFFDM 1109
Query: 294 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
IPSL +KVE+T+T++E E+ D VSYKD+A +LLKDW
Sbjct: 1110 IPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 1157
>ref|XP_021815993.1| DNA ligase 4 isoform X1 [Prunus avium]
Length = 1163
Score = 73.2 bits (178), Expect = 5e-12
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Frame = -3
Query: 456 KEIEQKNA--EDIKQGEWID----RVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 295
+ ++++NA +++ +G W + ++ + + + K E LEVM DPVQAM DM
Sbjct: 1056 ESLQRENAAVQEVAEGIWFEDHSYQIPDVEMIEKCNIENSGKPEKLEVMADPVQAMFFDM 1115
Query: 294 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXVSYKDIACDLLKDW 151
IPSL +KVE+T+T++E E+ D VSYKD+A +LLKDW
Sbjct: 1116 IPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 1163
>ref|XP_009359940.1| PREDICTED: DNA ligase 4 isoform X2 [Pyrus x bretschneideri]
Length = 1163
Score = 73.2 bits (178), Expect = 5e-12
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
S QRGK +EQ AEDI+ E ++ + + +E++K E LE DPV+AML DMI
Sbjct: 1056 SLQRGKAVEQDVAEDIRIEEPY-KIAEIKMKEKQNVQESKKREELESTADPVEAMLFDMI 1114
Query: 291 PSLGTQKVESTSTALESEEQPSD--XXXXXXXXXXVSYKDIACDLLKDW 151
PSLG +K E+T T+ E+ D VSYKDIA +LLKDW
Sbjct: 1115 PSLGRKKAETTYTSTRDEKPAPDPIPNAGPSKKKKVSYKDIASELLKDW 1163
>ref|XP_018503760.1| PREDICTED: DNA ligase 4 isoform X1 [Pyrus x bretschneideri]
Length = 1170
Score = 73.2 bits (178), Expect = 5e-12
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Frame = -3
Query: 471 SSQRGKEIEQKNAEDIKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 292
S QRGK +EQ AEDI+ E ++ + + +E++K E LE DPV+AML DMI
Sbjct: 1063 SLQRGKAVEQDVAEDIRIEEPY-KIAEIKMKEKQNVQESKKREELESTADPVEAMLFDMI 1121
Query: 291 PSLGTQKVESTSTALESEEQPSD--XXXXXXXXXXVSYKDIACDLLKDW 151
PSLG +K E+T T+ E+ D VSYKDIA +LLKDW
Sbjct: 1122 PSLGRKKAETTYTSTRDEKPAPDPIPNAGPSKKKKVSYKDIASELLKDW 1170