BLASTX nr result

ID: Acanthopanax23_contig00019934 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00019934
         (583 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POE44790.1| hypothetical protein CFP56_76685 [Quercus suber]        94   1e-19
gb|OMP12974.1| hypothetical protein COLO4_02498 [Corchorus olito...    70   6e-12
gb|OMP13086.1| hypothetical protein COLO4_02306 [Corchorus olito...    57   2e-07

>gb|POE44790.1| hypothetical protein CFP56_76685 [Quercus suber]
          Length = 282

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
 Frame = +2

Query: 182 PWRPCRANTELLNRHMQ---KAYQTSDTRIGLAVAMSEASRIKVSIIKVFSLGDAIVYSY 352
           PW P  AN   L  H++   K  ++ + + GLA    E  RIK      F L DA++YSY
Sbjct: 73  PWTPHTANMSQLPFHIKRGRKVLRSPERKQGLADVTRETGRIKE-----FRLNDALLYSY 127

Query: 353 FRDIRFVTLTCLLIGISMWWIDVPTLLFQKTVAFQSPDLGLIVRVMKDTYVNK 511
             D+RFV LTCL+IG S+WW+ VP  L +   A  SPDL ++V V +DTYVNK
Sbjct: 128 MYDLRFVLLTCLVIGFSIWWMAVPEPLLESPKALCSPDLEMLVNVARDTYVNK 180


>gb|OMP12974.1| hypothetical protein COLO4_02498 [Corchorus olitorius]
          Length = 124

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +2

Query: 362 IRFVTLTCLLIGISMWWIDVPTLLFQKTVAFQSPDLGLIVRVMKDTYVNKVCYLH-SVPS 538
           +RFV   C L+G+ +WW   P  LF    A    DL  ++++ KDT+VN VC  H  VPS
Sbjct: 1   MRFVLFFCALLGMLLWWHIAPPQLFLHPSALCCCDLSAVLQMCKDTFVNLVCCTHPDVPS 60

Query: 539 PCECGESLNRTAREI 583
           PC CGE LN + R I
Sbjct: 61  PCPCGEPLNSSIRHI 75


>gb|OMP13086.1| hypothetical protein COLO4_02306 [Corchorus olitorius]
          Length = 112

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +2

Query: 404 MWWIDVPTLLFQKTVAFQSPDLGLIVRVMKDTYVNKVCYLH-SVPSPCECGESLNRTARE 580
           +WW   P  LF    A    DL  ++++ KDT+VN VC  H  VPSPC CGE LN + R 
Sbjct: 3   LWWHIAPPQLFLHPSALCCCDLSAVLQMCKDTFVNLVCCTHPDVPSPCPCGEPLNSSIRH 62

Query: 581 I 583
           I
Sbjct: 63  I 63


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