BLASTX nr result
ID: Acanthopanax23_contig00019657
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00019657
(643 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008815022.1| RNA polymerase beta subunit (chloroplast) [M... 75 7e-12
gb|ARJ61675.1| RNA polymerase beta subunit (plastid) [Eleutheroc... 75 7e-12
gb|ANS71848.1| RpoB (chloroplast) [Eleutherococcus gracilistylus] 75 7e-12
gb|ANS71761.1| RpoB (chloroplast) [Eleutherococcus sessiliflorus] 75 7e-12
ref|YP_009161671.1| RNA polymerase beta subunit (chloroplast) [F... 75 7e-12
ref|YP_009159530.1| RpoB (chloroplast) [Dendropanax morbifer] >g... 75 7e-12
ref|YP_008815196.1| RNA polymerase beta subunit (chloroplast) [K... 75 7e-12
ref|YP_008814935.1| RNA polymerase beta subunit (chloroplast) [B... 75 7e-12
ref|YP_004935544.1| RNA polymerase beta subunit (chloroplast) [E... 75 7e-12
emb|CAJ46685.1| RNA polymerase beta subunit, partial (chloroplas... 70 8e-12
gb|OMP10601.1| hypothetical protein CCACVL1_00852, partial [Corc... 71 2e-11
gb|KZV16437.1| RNA polymerase beta subunit [Dorcoceras hygrometr... 72 2e-11
ref|XP_013442217.1| DNA-directed RNA polymerase subunit beta [Me... 69 2e-11
ref|YP_009403803.1| RNA polymerase beta subunit (plastid) [Legen... 73 2e-11
ref|YP_009241044.1| RNA polymerase beta subunit (chloroplast) [S... 73 2e-11
ref|YP_008815109.1| RNA polymerase beta subunit (chloroplast) [S... 73 2e-11
gb|ALO71254.1| RNA polymerase beta subunit (chloroplast) [Ampelo... 72 4e-11
ref|YP_009122717.1| RNA polymerase beta subunit (chloroplast) [D... 72 4e-11
gb|KZV16436.1| RNA polymerase beta subunit [Dorcoceras hygrometr... 72 4e-11
gb|KZV27573.1| RNA polymerase beta subunit [Dorcoceras hygrometr... 72 5e-11
>ref|YP_008815022.1| RNA polymerase beta subunit (chloroplast) [Metapanax delavayi]
gb|AGG39122.1| RNA polymerase beta subunit (chloroplast) [Metapanax delavayi]
Length = 1068
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 769 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 802
>gb|ARJ61675.1| RNA polymerase beta subunit (plastid) [Eleutherococcus senticosus]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>gb|ANS71848.1| RpoB (chloroplast) [Eleutherococcus gracilistylus]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>gb|ANS71761.1| RpoB (chloroplast) [Eleutherococcus sessiliflorus]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>ref|YP_009161671.1| RNA polymerase beta subunit (chloroplast) [Fatsia japonica]
gb|AKS10945.1| RNA polymerase beta subunit (chloroplast) [Fatsia japonica]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>ref|YP_009159530.1| RpoB (chloroplast) [Dendropanax morbifer]
gb|AKQ20720.1| RpoB (chloroplast) [Dendropanax morbifer]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>ref|YP_008815196.1| RNA polymerase beta subunit (chloroplast) [Kalopanax septemlobus]
gb|AGG39296.1| RNA polymerase beta subunit (chloroplast) [Kalopanax septemlobus]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>ref|YP_008814935.1| RNA polymerase beta subunit (chloroplast) [Brassaiopsis hainla]
gb|AGG39035.1| RNA polymerase beta subunit (chloroplast) [Brassaiopsis hainla]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>ref|YP_004935544.1| RNA polymerase beta subunit (chloroplast) [Eleutherococcus
senticosus]
gb|AEO92611.1| RNA polymerase beta subunit (chloroplast) [Eleutherococcus
senticosus]
Length = 1070
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 804
>emb|CAJ46685.1| RNA polymerase beta subunit, partial (chloroplast) [Nicotiana
glutinosa]
Length = 116
Score = 69.7 bits (169), Expect = 8e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KE+CLKLPIGGRG+VIDVRWIQKRGGSSYNPE I
Sbjct: 35 KETCLKLPIGGRGRVIDVRWIQKRGGSSYNPEMI 68
>gb|OMP10601.1| hypothetical protein CCACVL1_00852, partial [Corchorus capsularis]
Length = 210
Score = 70.9 bits (172), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KE+CLKLPIGGRG+VIDVRWIQK+GGSSYNPETI
Sbjct: 119 KETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETI 152
>gb|KZV16437.1| RNA polymerase beta subunit [Dorcoceras hygrometricum]
Length = 290
Score = 72.0 bits (175), Expect = 2e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KE+CLKLPIGGRG+VIDVRWIQKRGGSSYNPETI
Sbjct: 162 KETCLKLPIGGRGRVIDVRWIQKRGGSSYNPETI 195
>ref|XP_013442217.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gb|KEH16242.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
Length = 118
Score = 68.6 bits (166), Expect = 2e-11
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KE+CLKLPIGGRG+VIDVRWIQK+ GSSYNPETI
Sbjct: 26 KETCLKLPIGGRGRVIDVRWIQKKAGSSYNPETI 59
>ref|YP_009403803.1| RNA polymerase beta subunit (plastid) [Legenere valdiviana]
gb|ASA35069.1| RNA polymerase beta subunit (plastid) [Legenere valdiviana]
Length = 1070
Score = 73.2 bits (178), Expect = 2e-11
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 217 GGCKESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
G KESCLKLPIGGRG+VIDVRW+QK+GGSSYNPETI
Sbjct: 766 GNSKESCLKLPIGGRGRVIDVRWLQKKGGSSYNPETI 802
>ref|YP_009241044.1| RNA polymerase beta subunit (chloroplast) [Schefflera heptaphylla]
gb|AMK46167.1| RNA polymerase beta subunit (chloroplast) [Schefflera heptaphylla]
Length = 1070
Score = 73.2 bits (178), Expect = 2e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRG+VIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGRVIDVRWIQKRGGSSYNPETI 804
>ref|YP_008815109.1| RNA polymerase beta subunit (chloroplast) [Schefflera delavayi]
gb|AGG39209.1| RNA polymerase beta subunit (chloroplast) [Schefflera delavayi]
Length = 1070
Score = 73.2 bits (178), Expect = 2e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRG+VIDVRWIQKRGGSSYNPETI
Sbjct: 771 KESCLKLPIGGRGRVIDVRWIQKRGGSSYNPETI 804
>gb|ALO71254.1| RNA polymerase beta subunit (chloroplast) [Ampelopsis glandulosa
var. brevipedunculata]
Length = 1070
Score = 72.4 bits (176), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KE+CLKLPIGGRGQVIDVRWIQK+GGSSYNPETI
Sbjct: 771 KETCLKLPIGGRGQVIDVRWIQKKGGSSYNPETI 804
>ref|YP_009122717.1| RNA polymerase beta subunit (chloroplast) [Dendropanax dentiger]
gb|AJK29846.1| RNA polymerase beta subunit (chloroplast) [Dendropanax dentiger]
Length = 1070
Score = 72.4 bits (176), Expect = 4e-11
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPE I
Sbjct: 771 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPEMI 804
>gb|KZV16436.1| RNA polymerase beta subunit [Dorcoceras hygrometricum]
Length = 425
Score = 72.0 bits (175), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KE+CLKLPIGGRG+VIDVRWIQKRGGSSYNPETI
Sbjct: 294 KETCLKLPIGGRGRVIDVRWIQKRGGSSYNPETI 327
>gb|KZV27573.1| RNA polymerase beta subunit [Dorcoceras hygrometricum]
Length = 534
Score = 72.0 bits (175), Expect = 5e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1
Query: 226 KESCLKLPIGGRGQVIDVRWIQKRGGSSYNPETI 327
KE+CLKLPIGGRG+VIDVRWIQKRGGSSYNPETI
Sbjct: 294 KETCLKLPIGGRGRVIDVRWIQKRGGSSYNPETI 327