BLASTX nr result
ID: Acanthopanax23_contig00019200
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00019200
(526 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017222920.1| PREDICTED: DNA mismatch repair protein MSH1,... 139 7e-35
ref|XP_021607249.1| DNA mismatch repair protein MSH1, mitochondr... 132 2e-32
ref|XP_021607248.1| DNA mismatch repair protein MSH1, mitochondr... 132 2e-32
gb|PHT49339.1| DNA mismatch repair protein MSH1, mitochondrial [... 131 3e-32
gb|PHT85660.1| DNA mismatch repair protein MSH1, mitochondrial [... 131 3e-32
ref|XP_016566479.1| PREDICTED: DNA mismatch repair protein MSH1,... 131 3e-32
ref|XP_024197549.1| DNA mismatch repair protein MSH1, mitochondr... 131 5e-32
ref|XP_024197548.1| DNA mismatch repair protein MSH1, mitochondr... 131 5e-32
ref|XP_024197547.1| DNA mismatch repair protein MSH1, mitochondr... 131 5e-32
ref|XP_024197546.1| DNA mismatch repair protein MSH1, mitochondr... 131 5e-32
ref|XP_024197545.1| DNA mismatch repair protein MSH1, mitochondr... 131 5e-32
gb|PHT28012.1| DNA mismatch repair protein MSH1, mitochondrial [... 129 6e-32
gb|PLY73757.1| hypothetical protein LSAT_2X41221 [Lactuca sativa] 130 6e-32
ref|XP_023733888.1| DNA mismatch repair protein MSH1, mitochondr... 130 6e-32
ref|XP_021649445.1| DNA mismatch repair protein MSH1, mitochondr... 130 9e-32
ref|XP_021649432.1| DNA mismatch repair protein MSH1, mitochondr... 130 9e-32
gb|PHT27947.1| DNA mismatch repair protein MSH1, mitochondrial, ... 127 1e-31
ref|XP_002528340.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 129 2e-31
gb|KVI08021.1| DNA mismatch repair protein MutS, C-terminal, par... 129 2e-31
ref|XP_020536691.1| DNA mismatch repair protein MSH1, mitochondr... 129 2e-31
>ref|XP_017222920.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Daucus
carota subsp. sativus]
Length = 1130
Score = 139 bits (350), Expect = 7e-35
Identities = 67/78 (85%), Positives = 72/78 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
GETDDL RVR HRSKEG++NASFLY LV GKSIACQLETLLINQLPS+GFQLTN+ADGR
Sbjct: 1053 GETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGR 1112
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGTS+ SLENVTLHR
Sbjct: 1113 HRNFGTSDISLENVTLHR 1130
>ref|XP_021607249.1| DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Manihot
esculenta]
gb|OAY55484.1| hypothetical protein MANES_03G157900 [Manihot esculenta]
Length = 1142
Score = 132 bits (332), Expect = 2e-32
Identities = 61/77 (79%), Positives = 71/77 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G TDDLEGRVR HRSKEGM NASFLYF+V GKSIACQLETLLINQLP++GF+LTN+ADG+
Sbjct: 1066 GVTDDLEGRVRAHRSKEGMHNASFLYFIVQGKSIACQLETLLINQLPNKGFKLTNVADGK 1125
Query: 346 HRNFGTSNASLENVTLH 296
HRNFGT+N SLE++ +H
Sbjct: 1126 HRNFGTTNLSLESMPVH 1142
>ref|XP_021607248.1| DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Manihot
esculenta]
Length = 1143
Score = 132 bits (332), Expect = 2e-32
Identities = 61/77 (79%), Positives = 71/77 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G TDDLEGRVR HRSKEGM NASFLYF+V GKSIACQLETLLINQLP++GF+LTN+ADG+
Sbjct: 1067 GVTDDLEGRVRAHRSKEGMHNASFLYFIVQGKSIACQLETLLINQLPNKGFKLTNVADGK 1126
Query: 346 HRNFGTSNASLENVTLH 296
HRNFGT+N SLE++ +H
Sbjct: 1127 HRNFGTTNLSLESMPVH 1143
>gb|PHT49339.1| DNA mismatch repair protein MSH1, mitochondrial [Capsicum baccatum]
Length = 716
Score = 131 bits (330), Expect = 3e-32
Identities = 64/78 (82%), Positives = 69/78 (88%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVR HR KEGMENASFLYFLV GKSIACQLETLLINQLPS GFQLTN+ADG+
Sbjct: 639 GQTDDLEGRVRAHRLKEGMENASFLYFLVPGKSIACQLETLLINQLPSYGFQLTNVADGK 698
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGT+N S E T +R
Sbjct: 699 HRNFGTTNLSPEPSTAYR 716
>gb|PHT85660.1| DNA mismatch repair protein MSH1, mitochondrial [Capsicum annuum]
Length = 931
Score = 131 bits (330), Expect = 3e-32
Identities = 64/78 (82%), Positives = 69/78 (88%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVR HR KEGMENASFLYFLV GKSIACQLETLLINQLPS GFQLTN+ADG+
Sbjct: 854 GQTDDLEGRVRAHRLKEGMENASFLYFLVPGKSIACQLETLLINQLPSYGFQLTNVADGK 913
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGT+N S E T +R
Sbjct: 914 HRNFGTTNLSPEPSTAYR 931
>ref|XP_016566479.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Capsicum
annuum]
Length = 1141
Score = 131 bits (330), Expect = 3e-32
Identities = 64/78 (82%), Positives = 69/78 (88%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVR HR KEGMENASFLYFLV GKSIACQLETLLINQLPS GFQLTN+ADG+
Sbjct: 1064 GQTDDLEGRVRAHRLKEGMENASFLYFLVPGKSIACQLETLLINQLPSYGFQLTNVADGK 1123
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGT+N S E T +R
Sbjct: 1124 HRNFGTTNLSPEPSTAYR 1141
>ref|XP_024197549.1| DNA mismatch repair protein MSH1, mitochondrial isoform X5 [Rosa
chinensis]
Length = 906
Score = 131 bits (329), Expect = 5e-32
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVRTHRSKEGM+ A+FLYF V GKS+ACQLETLLINQLP+QGF L+N+ADG+
Sbjct: 829 GQTDDLEGRVRTHRSKEGMQKANFLYFTVPGKSLACQLETLLINQLPNQGFHLSNVADGK 888
Query: 346 HRNFGTSNASLENVTL 299
HRNFGTSN SLE VT+
Sbjct: 889 HRNFGTSNISLEGVTV 904
>ref|XP_024197548.1| DNA mismatch repair protein MSH1, mitochondrial isoform X4 [Rosa
chinensis]
gb|PRQ36823.1| putative DNA mismatch repair protein MutS, type 1 [Rosa chinensis]
Length = 1137
Score = 131 bits (329), Expect = 5e-32
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVRTHRSKEGM+ A+FLYF V GKS+ACQLETLLINQLP+QGF L+N+ADG+
Sbjct: 1060 GQTDDLEGRVRTHRSKEGMQKANFLYFTVPGKSLACQLETLLINQLPNQGFHLSNVADGK 1119
Query: 346 HRNFGTSNASLENVTL 299
HRNFGTSN SLE VT+
Sbjct: 1120 HRNFGTSNISLEGVTV 1135
>ref|XP_024197547.1| DNA mismatch repair protein MSH1, mitochondrial isoform X3 [Rosa
chinensis]
Length = 1141
Score = 131 bits (329), Expect = 5e-32
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVRTHRSKEGM+ A+FLYF V GKS+ACQLETLLINQLP+QGF L+N+ADG+
Sbjct: 1064 GQTDDLEGRVRTHRSKEGMQKANFLYFTVPGKSLACQLETLLINQLPNQGFHLSNVADGK 1123
Query: 346 HRNFGTSNASLENVTL 299
HRNFGTSN SLE VT+
Sbjct: 1124 HRNFGTSNISLEGVTV 1139
>ref|XP_024197546.1| DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Rosa
chinensis]
Length = 1143
Score = 131 bits (329), Expect = 5e-32
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVRTHRSKEGM+ A+FLYF V GKS+ACQLETLLINQLP+QGF L+N+ADG+
Sbjct: 1066 GQTDDLEGRVRTHRSKEGMQKANFLYFTVPGKSLACQLETLLINQLPNQGFHLSNVADGK 1125
Query: 346 HRNFGTSNASLENVTL 299
HRNFGTSN SLE VT+
Sbjct: 1126 HRNFGTSNISLEGVTV 1141
>ref|XP_024197545.1| DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Rosa
chinensis]
Length = 1147
Score = 131 bits (329), Expect = 5e-32
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVRTHRSKEGM+ A+FLYF V GKS+ACQLETLLINQLP+QGF L+N+ADG+
Sbjct: 1070 GQTDDLEGRVRTHRSKEGMQKANFLYFTVPGKSLACQLETLLINQLPNQGFHLSNVADGK 1129
Query: 346 HRNFGTSNASLENVTL 299
HRNFGTSN SLE VT+
Sbjct: 1130 HRNFGTSNISLEGVTV 1145
>gb|PHT28012.1| DNA mismatch repair protein MSH1, mitochondrial [Capsicum baccatum]
Length = 474
Score = 129 bits (323), Expect = 6e-32
Identities = 63/78 (80%), Positives = 68/78 (87%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVR HR KEGMENASFLYFLV GKSIACQLETLL NQLPS GFQLTN+ADG+
Sbjct: 397 GQTDDLEGRVRAHRLKEGMENASFLYFLVPGKSIACQLETLLRNQLPSYGFQLTNVADGK 456
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGT+N S E T +R
Sbjct: 457 HRNFGTTNLSPEPSTAYR 474
>gb|PLY73757.1| hypothetical protein LSAT_2X41221 [Lactuca sativa]
Length = 1064
Score = 130 bits (328), Expect = 6e-32
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
GETDDLEGRVR HR K GMENA+FLYFLV GKS+ACQLETLLIN+LP GFQLTN+ADG+
Sbjct: 987 GETDDLEGRVRAHRGKPGMENATFLYFLVSGKSVACQLETLLINRLPKHGFQLTNVADGK 1046
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGT + S++ ++LHR
Sbjct: 1047 HRNFGTCDVSVQGISLHR 1064
>ref|XP_023733888.1| DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Lactuca
sativa]
Length = 1139
Score = 130 bits (328), Expect = 6e-32
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
GETDDLEGRVR HR K GMENA+FLYFLV GKS+ACQLETLLIN+LP GFQLTN+ADG+
Sbjct: 1062 GETDDLEGRVRAHRGKPGMENATFLYFLVSGKSVACQLETLLINRLPKHGFQLTNVADGK 1121
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGT + S++ ++LHR
Sbjct: 1122 HRNFGTCDVSVQGISLHR 1139
>ref|XP_021649445.1| DNA mismatch repair protein MSH1, mitochondrial isoform X3 [Hevea
brasiliensis]
Length = 899
Score = 130 bits (327), Expect = 9e-32
Identities = 60/77 (77%), Positives = 70/77 (90%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G TDDLEGRVR HRSKEGM + SFLYF+V GKSIACQLETLLINQLP++GFQLTN+ADG+
Sbjct: 823 GVTDDLEGRVRAHRSKEGMHHVSFLYFIVQGKSIACQLETLLINQLPNKGFQLTNVADGK 882
Query: 346 HRNFGTSNASLENVTLH 296
HRNFGT+N SLE++ +H
Sbjct: 883 HRNFGTANLSLESMPVH 899
>ref|XP_021649432.1| DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Hevea
brasiliensis]
Length = 1146
Score = 130 bits (327), Expect = 9e-32
Identities = 60/77 (77%), Positives = 70/77 (90%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G TDDLEGRVR HRSKEGM + SFLYF+V GKSIACQLETLLINQLP++GFQLTN+ADG+
Sbjct: 1070 GVTDDLEGRVRAHRSKEGMHHVSFLYFIVQGKSIACQLETLLINQLPNKGFQLTNVADGK 1129
Query: 346 HRNFGTSNASLENVTLH 296
HRNFGT+N SLE++ +H
Sbjct: 1130 HRNFGTANLSLESMPVH 1146
>gb|PHT27947.1| DNA mismatch repair protein MSH1, mitochondrial, partial [Capsicum
baccatum]
Length = 436
Score = 127 bits (320), Expect = 1e-31
Identities = 62/78 (79%), Positives = 68/78 (87%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVR H KEGME+ASFLYFLV GKSIACQLETLLINQLPS GFQLTN+ADG+
Sbjct: 359 GQTDDLEGRVRAHHLKEGMEDASFLYFLVPGKSIACQLETLLINQLPSYGFQLTNVADGK 418
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGT+N S E T +R
Sbjct: 419 HRNFGTTNLSPEPSTAYR 436
>ref|XP_002528340.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1,
mitochondrial [Ricinus communis]
Length = 1039
Score = 129 bits (325), Expect = 2e-31
Identities = 61/74 (82%), Positives = 69/74 (93%)
Frame = -1
Query: 520 TDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGRHR 341
TDDLEGRVR HRSKEGM NASFLYF+V GKSIACQLETLLINQLP +GFQLTN+ADG+HR
Sbjct: 965 TDDLEGRVRAHRSKEGMHNASFLYFIVQGKSIACQLETLLINQLPCKGFQLTNMADGKHR 1024
Query: 340 NFGTSNASLENVTL 299
NFGT+N SLE+V++
Sbjct: 1025 NFGTTNLSLESVSV 1038
>gb|KVI08021.1| DNA mismatch repair protein MutS, C-terminal, partial [Cynara
cardunculus var. scolymus]
Length = 724
Score = 129 bits (324), Expect = 2e-31
Identities = 59/78 (75%), Positives = 71/78 (91%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G+TDDLEGRVR HRSK+GM+NAS LYFLV GKS+ACQLETLLINQLP GF+L+N++DG+
Sbjct: 646 GQTDDLEGRVRAHRSKQGMQNASVLYFLVPGKSMACQLETLLINQLPKHGFRLSNVSDGK 705
Query: 346 HRNFGTSNASLENVTLHR 293
HRNFGTS+ SLE ++LHR
Sbjct: 706 HRNFGTSDVSLEGLSLHR 723
>ref|XP_020536691.1| DNA mismatch repair protein MSH1, mitochondrial isoform X3 [Jatropha
curcas]
Length = 899
Score = 129 bits (324), Expect = 2e-31
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = -1
Query: 526 GETDDLEGRVRTHRSKEGMENASFLYFLVHGKSIACQLETLLINQLPSQGFQLTNIADGR 347
G TDDLEGRV HRSKEGM NASFLYF+V GKSIACQLETLLINQLP +GFQL+NIADG+
Sbjct: 823 GVTDDLEGRVHAHRSKEGMYNASFLYFIVKGKSIACQLETLLINQLPRKGFQLSNIADGK 882
Query: 346 HRNFGTSNASLENVTLH 296
HRNFGTSN SLE +H
Sbjct: 883 HRNFGTSNLSLETTPVH 899