BLASTX nr result

ID: Acanthopanax23_contig00018817 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00018817
         (856 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017227759.1| PREDICTED: two-component response regulator ...    74   5e-11
gb|KZN10345.1| hypothetical protein DCAR_003001 [Daucus carota s...    70   1e-09

>ref|XP_017227759.1| PREDICTED: two-component response regulator ARR12 [Daucus carota
           subsp. sativus]
          Length = 614

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 47/115 (40%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
 Frame = -2

Query: 855 CFKQTNPGILRDTGPSI-MHVGSDSHDVSSINLAPAQYPDAKIDILQCQAGSGSCGIEQN 679
           CF+ T+P ILRD    + +++GSD HD SS  L P   PD  ID+LQCQ+ S +      
Sbjct: 510 CFRHTSPSILRDNSLLVPLNIGSDPHDASSFTLRPTHVPDGNIDLLQCQSASSN------ 563

Query: 678 INVTLQQGWDDSKQDA-SHQXXXXXXXXXXXLPHDVAXXXXXXXXXXXNQLWRQL 517
              TL QGW DSKQDA  HQ           LP  V+           N+ WRQL
Sbjct: 564 ---TL-QGWGDSKQDAVPHQTNLISSSVNSWLPQGVSSSFDPSVMSSNNEHWRQL 614


>gb|KZN10345.1| hypothetical protein DCAR_003001 [Daucus carota subsp. sativus]
          Length = 647

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -2

Query: 855 CFKQTNPGILRDTGPSI-MHVGSDSHDVSSINLAPAQYPDAKIDILQCQAGSGSCGIEQN 679
           CF+ T+P ILRD    + +++GSD HD SS  L P   PD  ID+LQCQ+ S +      
Sbjct: 504 CFRHTSPSILRDNSLLVPLNIGSDPHDASSFTLRPTHVPDGNIDLLQCQSASSN------ 557

Query: 678 INVTLQQGWDDSKQDA 631
              TL QGW DSKQDA
Sbjct: 558 ---TL-QGWGDSKQDA 569


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