BLASTX nr result

ID: Acanthopanax23_contig00017786 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00017786
         (546 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN05669.1| hypothetical protein DCAR_006506 [Daucus carota s...    52   9e-06

>gb|KZN05669.1| hypothetical protein DCAR_006506 [Daucus carota subsp. sativus]
          Length = 83

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
 Frame = +2

Query: 137 AGRSDGINKNAMKLTSPQEVITKMKVRRVLSTGGVDVQDYHGAEANPVHD---PGKGKTG 307
           AGRSD      +KL    +V  K K+R++LS   V+V DY     NP HD   PGKGK G
Sbjct: 20  AGRSDDGRTKYVKLCDSCDVAMKTKIRKILSV--VEVLDYRDPGPNPGHDPGGPGKGKPG 77

Query: 308 GRAANP 325
           G+  NP
Sbjct: 78  GKGINP 83


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