BLASTX nr result

ID: Acanthopanax23_contig00015839 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00015839
         (1468 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009045731.1| orf148b (mitochondrion) [Batis maritima] >gi...    82   3e-30
ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulga...   102   8e-22
emb|CBJ23345.1| hypothetical protein (mitochondrion) [Beta vulga...   100   6e-21
ref|YP_009049788.1| hypothetical protein (mitochondrion) [Capsic...    97   2e-20
gb|PHU11129.1| hypothetical protein BC332_18059 [Capsicum chinense]    96   6e-20
gb|PLY62420.1| hypothetical protein LSAT_5X16461 [Lactuca sativa]      90   7e-18
gb|PAN05077.1| hypothetical protein PAHAL_A01140 [Panicum hallii]      76   1e-13
gb|PAN43687.1| hypothetical protein PAHAL_H00204 [Panicum hallii]      76   2e-13
ref|XP_016500820.1| PREDICTED: NADH-ubiquinone oxidoreductase ch...    78   1e-12
dbj|GAY67606.1| hypothetical protein CUMW_257880 [Citrus unshiu]       71   4e-11
gb|OTG24628.1| hypothetical protein HannXRQ_Chr05g0138811 [Helia...    53   1e-07
ref|YP_002608398.1| NADH dehydrogenase subunit 6 [Vitis vinifera...    62   4e-07
gb|KYP78081.1| hypothetical protein KK1_050527, partial [Cajanus...    55   3e-06
ref|YP_009315968.1| NADH dehydrogenase subunit 6 (mitochondrion)...    58   9e-06

>ref|YP_009045731.1| orf148b (mitochondrion) [Batis maritima]
 gb|AIC83334.1| orf148b (mitochondrion) [Batis maritima]
          Length = 148

 Score = 82.4 bits (202), Expect(2) = 3e-30
 Identities = 46/74 (62%), Positives = 51/74 (68%)
 Frame = -2

Query: 279 ITTSAVVRIXXXXXXXXXXXKALTELLTESQISLDAENFLFVQVDQRFGFLLPHLLALWA 100
           ITTSAVVR+           KAL ELLTESQISLD ENFL  QVDQRFG LLPHLLA ++
Sbjct: 55  ITTSAVVRLSFSFSKPSPSTKALAELLTESQISLDTENFLCAQVDQRFGLLLPHLLAFFS 114

Query: 99  PEKRKLKDFIRPEE 58
           PEK K  +  + EE
Sbjct: 115 PEKIKQAEIKKKEE 128



 Score = 80.1 bits (196), Expect(2) = 3e-30
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = -1

Query: 427 IGNETECTVFLARTTIKPETKARLDKTESIIVRRPSLKWNFHTGA*KSIYYD 272
           +GN+TECT FLAR TIKPETKA LDKTESI+VRRPSLKWNFH  A  S+  D
Sbjct: 1   MGNKTECTGFLARATIKPETKAGLDKTESIMVRRPSLKWNFHAEARTSMKVD 52


>ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
 ref|YP_004222289.1| hypothetical protein BevumaM_p051 (mitochondrion) [Beta vulgaris
           subsp. maritima]
 ref|YP_004842203.1| hypothetical protein BemaM_p159 (mitochondrion) [Beta macrocarpa]
 dbj|BAA99357.1| orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]
 emb|CBJ14109.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBJ17516.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBX25008.1| hypothetical protein (mitochondrion) [Beta macrocarpa]
 emb|CBL52034.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 169

 Score =  102 bits (254), Expect = 8e-22
 Identities = 58/81 (71%), Positives = 61/81 (75%), Gaps = 7/81 (8%)
 Frame = -3

Query: 410 MYRIFSTYNHQTRDQSKARQNRKYHSTSSFPEMELSYW-----SMKVDLLRPARLFVFHF 246
           MYRIFSTYNHQTRDQS+ARQNRKYH TSSF EMELS W     SMKVDLLR     V H 
Sbjct: 1   MYRIFSTYNHQTRDQSRARQNRKYHGTSSFTEMELSCWFGVRTSMKVDLLRTTSA-VVHI 59

Query: 245 LLPS--QALLRKHSLSYLRNL 189
             PS  QALL +HSLSYLR+L
Sbjct: 60  SFPSSKQALLGEHSLSYLRSL 80


>emb|CBJ23345.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 169

 Score =  100 bits (248), Expect = 6e-21
 Identities = 57/81 (70%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
 Frame = -3

Query: 410 MYRIFSTYNHQTRDQSKARQNRKYHSTSSFPEMELSYW-----SMKVDLLRPARLFVFHF 246
           MYRI STYNHQTRDQS+ARQNRKYH TSSF EMELS W     SMKVDLLR     V H 
Sbjct: 1   MYRILSTYNHQTRDQSRARQNRKYHGTSSFTEMELSCWFGVRTSMKVDLLRTTSA-VVHI 59

Query: 245 LLPS--QALLRKHSLSYLRNL 189
             PS  QALL +HSLSYLR+L
Sbjct: 60  SFPSSKQALLGEHSLSYLRSL 80


>ref|YP_009049788.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG89832.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG90146.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|PHT78700.1| hypothetical protein T459_16752 [Capsicum annuum]
          Length = 117

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 43/50 (86%), Positives = 44/50 (88%)
 Frame = +2

Query: 302 MKVPFQGRTTYYDTFCFVEPCFGLWFDGCTC*KYGTFCFVSNPGLSQHSR 451
           MKVPFQGRTTYYDTF FVEPCFGLWFDGCTC K GTF FVS+P LSQH R
Sbjct: 1   MKVPFQGRTTYYDTFRFVEPCFGLWFDGCTCKKSGTFRFVSHPSLSQHFR 50


>gb|PHU11129.1| hypothetical protein BC332_18059 [Capsicum chinense]
          Length = 117

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 41/50 (82%), Positives = 43/50 (86%)
 Frame = +2

Query: 302 MKVPFQGRTTYYDTFCFVEPCFGLWFDGCTC*KYGTFCFVSNPGLSQHSR 451
           MKVPFQGRTTYYDTF F +PCFGLWFDGCTC K G FCFVS+P LSQH R
Sbjct: 1   MKVPFQGRTTYYDTFHFFKPCFGLWFDGCTCKKSGIFCFVSHPSLSQHFR 50


>gb|PLY62420.1| hypothetical protein LSAT_5X16461 [Lactuca sativa]
          Length = 127

 Score = 90.1 bits (222), Expect = 7e-18
 Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -1

Query: 427 IGNETECTVFLARTTIKPETKARLDKTESIIVRRPSLKWNFHTGA*KSIYYD-QRGCSYF 251
           +GN+TECT FLARTTIKPETKARLDKTESIIVRRPSLKWNFH GA  S+  D  +    F
Sbjct: 1   MGNKTECTGFLARTTIKPETKARLDKTESIIVRRPSLKWNFHAGARTSMKVDLLQPARLF 60

Query: 250 IFFF 239
           +F F
Sbjct: 61  VFHF 64



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 296 SMKVDLLRPARLFVFHFLLPSQALLRKHSLSYLRNLKSLS 177
           SMKVDLL+PARLFVFHFLLPS + L   +LSYLRNLKSLS
Sbjct: 48  SMKVDLLQPARLFVFHFLLPSPSFL---ALSYLRNLKSLS 84


>gb|PAN05077.1| hypothetical protein PAHAL_A01140 [Panicum hallii]
          Length = 67

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 35/41 (85%), Positives = 36/41 (87%)
 Frame = -3

Query: 410 MYRIFSTYNHQTRDQSKARQNRKYHSTSSFPEMELSYWSMK 288
           MYRIFSTYNHQTRDQS+ARQNRKYH TSSF EMEL  WS K
Sbjct: 1   MYRIFSTYNHQTRDQSRARQNRKYHGTSSFLEMELECWSKK 41


>gb|PAN43687.1| hypothetical protein PAHAL_H00204 [Panicum hallii]
          Length = 84

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 35/41 (85%), Positives = 36/41 (87%)
 Frame = -3

Query: 410 MYRIFSTYNHQTRDQSKARQNRKYHSTSSFPEMELSYWSMK 288
           MYRIFSTYNHQTRDQS+ARQNRKYH TSSF EMEL  WS K
Sbjct: 1   MYRIFSTYNHQTRDQSRARQNRKYHGTSSFLEMELECWSKK 41


>ref|XP_016500820.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 6-like [Nicotiana
           tabacum]
          Length = 223

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 52/119 (43%), Positives = 53/119 (44%)
 Frame = +3

Query: 96  QEPRALKGGGEGSRTSDRPGQIKNSRRRERFEIP*VTQ*VLSKKGLAWKKKMKYEQPRWS 275
           Q  R LKGGGEGSRTS+RPG I NSRRRERFEIP                          
Sbjct: 2   QGSRRLKGGGEGSRTSNRPGHINNSRRRERFEIP-------------------------- 35

Query: 276 **IDFHAPV*KFHFREGRRTMIXXXXXXXXXXXXXXXXRAKNTVHSVSFPIPVFRNTPG 452
                          EGRRTMI                RAKN VHSV F IPVFRNT G
Sbjct: 36  ---------------EGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFLIPVFRNTSG 79


>dbj|GAY67606.1| hypothetical protein CUMW_257880 [Citrus unshiu]
          Length = 142

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +2

Query: 302 MKVPFQGRTTYYDTFCFVEPCFGLWFDGC 388
           MKVPFQGRTTY+DTFCFVEPCFGLWFDGC
Sbjct: 1   MKVPFQGRTTYHDTFCFVEPCFGLWFDGC 29


>gb|OTG24628.1| hypothetical protein HannXRQ_Chr05g0138811 [Helianthus annuus]
 gb|OTG24629.1| hypothetical protein HannXRQ_Chr05g0138821 [Helianthus annuus]
          Length = 106

 Score = 52.8 bits (125), Expect(2) = 1e-07
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +2

Query: 335 YDTFCFVEPCFGLWFDGCTC 394
           YDTFCFVEPCF LWFDGCTC
Sbjct: 26  YDTFCFVEPCFDLWFDGCTC 45



 Score = 33.5 bits (75), Expect(2) = 1e-07
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +3

Query: 396 KNTVHSVSFPIPVFRNTPG 452
           KN VHSV FPI VFRNT G
Sbjct: 46  KNPVHSVLFPIQVFRNTSG 64


>ref|YP_002608398.1| NADH dehydrogenase subunit 6 [Vitis vinifera]
 emb|CAQ77660.1| NADH dehydrogenase subunit 6 (mitochondrion) [Vitis vinifera]
 gb|ACS15202.1| NADH dehydrogenase subunit 6 (mitochondrion) [Vitis vinifera]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 32/53 (60%), Positives = 32/53 (60%)
 Frame = +3

Query: 294 APV*KFHFREGRRTMIXXXXXXXXXXXXXXXXRAKNTVHSVSFPIPVFRNTPG 452
           AP  KFHFREGRRTMI                RAKN VHSV FPIPVFRNT G
Sbjct: 5   APALKFHFREGRRTMILSVSSSPALVSGLMVARAKNPVHSVLFPIPVFRNTSG 57


>gb|KYP78081.1| hypothetical protein KK1_050527, partial [Cajanus cajan]
          Length = 53

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
 Frame = -1

Query: 370 TKARLDKTESIIVRRPSLKWNFHTGA*KSIYYDQ--RGCSYFIFFFQAKPFLESTH 209
           TKA LDKTESI+VRRPSLKWNFH  +  S+  D     C+  +  F    FLESTH
Sbjct: 1   TKAGLDKTESIMVRRPSLKWNFHASSCSSMKVDLFITTCAVVLLSFS---FLESTH 53


>ref|YP_009315968.1| NADH dehydrogenase subunit 6 (mitochondrion) [Cocos nucifera]
 gb|AOX12962.1| NADH dehydrogenase subunit 6 (mitochondrion) [Cocos nucifera]
          Length = 252

 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 29/49 (59%), Positives = 31/49 (63%)
 Frame = +3

Query: 306 KFHFREGRRTMIXXXXXXXXXXXXXXXXRAKNTVHSVSFPIPVFRNTPG 452
           KFHF+EGRRTMI                RAKN VHSVSFPIPVFR+T G
Sbjct: 9   KFHFKEGRRTMILSVSSSPALVSGLMVVRAKNPVHSVSFPIPVFRDTSG 57


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