BLASTX nr result

ID: Acanthopanax23_contig00015470 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00015470
         (523 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPD67145.1| hypothetical protein GOBAR_DD35979 [Gossypium bar...    56   5e-06
ref|XP_017607708.1| PREDICTED: auxin response factor 18-like [Go...    56   5e-06
ref|XP_016669568.1| PREDICTED: auxin response factor 18-like [Go...    56   5e-06
gb|KHG16689.1| Auxin response factor 18 [Gossypium arboreum]           56   5e-06
gb|PPD82771.1| hypothetical protein GOBAR_DD20272 [Gossypium bar...    55   7e-06
ref|XP_015088546.1| PREDICTED: auxin response factor 18-like [So...    55   1e-05
ref|XP_004246657.1| PREDICTED: auxin response factor 18-like iso...    55   1e-05

>gb|PPD67145.1| hypothetical protein GOBAR_DD35979 [Gossypium barbadense]
 gb|PPR90934.1| hypothetical protein GOBAR_AA29739 [Gossypium barbadense]
          Length = 708

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 522 KQIGDEPFSDFIKTARRLTILTD*SSNNVGT*KTRENS 409
           KQIG+EPFSDF+KTARRLTILTD SS+NVG  + R  S
Sbjct: 671 KQIGEEPFSDFMKTARRLTILTDSSSDNVGEYRGRSKS 708


>ref|XP_017607708.1| PREDICTED: auxin response factor 18-like [Gossypium arboreum]
          Length = 708

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 522 KQIGDEPFSDFIKTARRLTILTD*SSNNVGT*KTRENS 409
           KQIG+EPFSDF+KTARRLTILTD SS+NVG  + R  S
Sbjct: 671 KQIGEEPFSDFMKTARRLTILTDSSSDNVGEYRGRSKS 708


>ref|XP_016669568.1| PREDICTED: auxin response factor 18-like [Gossypium hirsutum]
          Length = 708

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 522 KQIGDEPFSDFIKTARRLTILTD*SSNNVGT*KTRENS 409
           KQIG+EPFSDF+KTARRLTILTD SS+NVG  + R  S
Sbjct: 671 KQIGEEPFSDFMKTARRLTILTDSSSDNVGEYRGRSKS 708


>gb|KHG16689.1| Auxin response factor 18 [Gossypium arboreum]
          Length = 708

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 522 KQIGDEPFSDFIKTARRLTILTD*SSNNVGT*KTRENS 409
           KQIG+EPFSDF+KTARRLTILTD SS+NVG  + R  S
Sbjct: 671 KQIGEEPFSDFMKTARRLTILTDSSSDNVGEYRGRSKS 708


>gb|PPD82771.1| hypothetical protein GOBAR_DD20272 [Gossypium barbadense]
          Length = 201

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -2

Query: 522 KQIGDEPFSDFIKTARRLTILTD*SSNNVG 433
           KQIG+EPFSDF+KTARRLTILTD SS+NVG
Sbjct: 164 KQIGEEPFSDFMKTARRLTILTDSSSDNVG 193


>ref|XP_015088546.1| PREDICTED: auxin response factor 18-like [Solanum pennellii]
          Length = 694

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -2

Query: 522 KQIGDEPFSDFIKTARRLTILTD*SSNNVG 433
           KQ+GDEPFSDF+KTARRLTILTD SS+NVG
Sbjct: 662 KQLGDEPFSDFMKTARRLTILTDSSSDNVG 691


>ref|XP_004246657.1| PREDICTED: auxin response factor 18-like isoform X1 [Solanum
           lycopersicum]
          Length = 694

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -2

Query: 522 KQIGDEPFSDFIKTARRLTILTD*SSNNVG 433
           KQ+GDEPFSDF+KTARRLTILTD SS+NVG
Sbjct: 662 KQLGDEPFSDFMKTARRLTILTDSSSDNVG 691


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