BLASTX nr result

ID: Acanthopanax23_contig00015299 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00015299
         (681 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017228349.1| PREDICTED: uncharacterized protein LOC108192...    75   4e-12
ref|XP_017247891.1| PREDICTED: uncharacterized protein LOC108219...    64   4e-08
gb|KZM97908.1| hypothetical protein DCAR_014730 [Daucus carota s...    64   4e-08

>ref|XP_017228349.1| PREDICTED: uncharacterized protein LOC108192414 [Daucus carota
           subsp. sativus]
 gb|KZM80688.1| hypothetical protein DCAR_031739 [Daucus carota subsp. sativus]
          Length = 451

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 58/165 (35%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
 Frame = +2

Query: 98  GLTSTGPTFDPVGAVPTVVPIAQVDGLSPAKRRGRPPKVKFVEVGAEP---VGPLVSIGP 268
           GL      FDP+ AVP VVPI +VD  +  KRRGRPPKV+ + V  EP   V P+V   P
Sbjct: 151 GLVGGAAPFDPIEAVPNVVPIGEVDAGTVVKRRGRPPKVQAMMVEGEPPVVVEPVVGATP 210

Query: 269 VDGVQGTVSKRRGRPLKVN-------NGPRPILEKGKGRPKLLPVMNGGVXXXXXXXXXX 427
           +      V +R GRP KV+       NG   + ++G+GR    PV N GV          
Sbjct: 211 I-----PVGRRPGRPPKVSYGMVGVVNGGSILGKRGRGR----PVKNLGVGSGLVGYVGG 261

Query: 428 XXXXXXXXXXXXVVSTI-----------GLTGKPRGRPRKNVALN 529
                        V  +           G   +PRGRPRK+V +N
Sbjct: 262 AKRGRGRPPKFRGVGLVMGQRPRGRPRKGTVARPRGRPRKSVPVN 306


>ref|XP_017247891.1| PREDICTED: uncharacterized protein LOC108219115 [Daucus carota
           subsp. sativus]
          Length = 504

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +2

Query: 122 FDPVGAVPTVVPIAQVDGLSPAKRR-GRPPKVKFVEVGAEPVGPLVSIGPVDGVQGTVSK 298
           FDP+GAVP VVP+ +VDG +  KRR GRPPK++ V V AEP+       P  G +  V +
Sbjct: 183 FDPIGAVPNVVPMGEVDGGTVVKRRPGRPPKMQGVAVEAEPI---AVAEPGVGEKVKVGR 239

Query: 299 RRGRPLKVNNGPRPILEKGKGRPKLLPVMNGGV 397
           + GRP KVN G   ++  G+ RP   P +N  +
Sbjct: 240 KPGRPPKVNKG-TGVVPAGR-RPGRPPKVNNEI 270


>gb|KZM97908.1| hypothetical protein DCAR_014730 [Daucus carota subsp. sativus]
          Length = 575

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +2

Query: 122 FDPVGAVPTVVPIAQVDGLSPAKRR-GRPPKVKFVEVGAEPVGPLVSIGPVDGVQGTVSK 298
           FDP+GAVP VVP+ +VDG +  KRR GRPPK++ V V AEP+       P  G +  V +
Sbjct: 254 FDPIGAVPNVVPMGEVDGGTVVKRRPGRPPKMQGVAVEAEPI---AVAEPGVGEKVKVGR 310

Query: 299 RRGRPLKVNNGPRPILEKGKGRPKLLPVMNGGV 397
           + GRP KVN G   ++  G+ RP   P +N  +
Sbjct: 311 KPGRPPKVNKG-TGVVPAGR-RPGRPPKVNNEI 341


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