BLASTX nr result

ID: Acanthopanax23_contig00015116 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00015116
         (520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN05188.1| hypothetical protein DCAR_006025 [Daucus carota s...    60   4e-09
gb|PPD77443.1| hypothetical protein GOBAR_DD25623 [Gossypium bar...    54   3e-06

>gb|KZN05188.1| hypothetical protein DCAR_006025 [Daucus carota subsp. sativus]
          Length = 79

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +2

Query: 134 MEISAPKPKNNPNQSLPPKRGQIKVKILSKFFKSAVKAVSIAG-GSKGKERENQXXXXXX 310
           ME +A K K++P+  +PPKRG+++ K+LSK  KSAV  VS+A  GS G  R +       
Sbjct: 1   MEYTAYKSKSSPHHRIPPKRGEVQRKVLSKLLKSAVTVVSLASRGSGGVSRRSGRSLSSS 60

Query: 311 XXXXXXXXXGYNSDDHSD 364
                    GY SDDH D
Sbjct: 61  SSASDGTLSGYGSDDHLD 78


>gb|PPD77443.1| hypothetical protein GOBAR_DD25623 [Gossypium barbadense]
          Length = 100

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 28/89 (31%), Positives = 41/89 (46%)
 Frame = +2

Query: 86  SIHFHLQKLSKTQLKEMEISAPKPKNNPNQSLPPKRGQIKVKILSKFFKSAVKAVSIAGG 265
           ++ F  Q   +T   +ME +   P     QSLPP+RGQ+K++I+  FFKS     S+A  
Sbjct: 12  TVQFPTQHKPQTWSPKMEFTVTSPTKKQKQSLPPRRGQVKMRIIKGFFKSVTSMASVAKK 71

Query: 266 SKGKERENQXXXXXXXXXXXXXXXGYNSD 352
              K +E+                 YNSD
Sbjct: 72  MPSKMKESGPGFSSTSTTPAPPPTAYNSD 100


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